RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 BRINP3Q76B58 766 aa24.47■■□□□ 1.51
PSEN1-217ENST00000556533 NALCNQ8IZF0 1738 aa24.47■■□□□ 1.51
PSEN1-217ENST00000556533 MST1RQ04912 1400 aa24.46■■□□□ 1.51
PSEN1-217ENST00000556533 NBPF8Q3BBV2 869 aa24.45■■□□□ 1.5
PSEN1-217ENST00000556533 ROBO1Q9Y6N7 1651 aa24.45■■□□□ 1.5
PSEN1-217ENST00000556533 HIRIP3Q9BW71 556 aaPredicted RBP24.44■■□□□ 1.5
PSEN1-217ENST00000556533 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
PSEN1-217ENST00000556533 KNDC1Q76NI1 1749 aa24.43■■□□□ 1.5
PSEN1-217ENST00000556533 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
PSEN1-217ENST00000556533 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
PSEN1-217ENST00000556533 C1orf167Q5SNV9 1468 aa24.41■■□□□ 1.5
PSEN1-217ENST00000556533 ESCO1Q5FWF5 840 aa24.4■■□□□ 1.5
PSEN1-217ENST00000556533 DDX17Q92841 729 aaKnown RBP24.39■■□□□ 1.49
PSEN1-217ENST00000556533 ROCK2O75116 1388 aaKnown RBP24.39■■□□□ 1.49
PSEN1-217ENST00000556533 CLSPNQ9HAW4 1339 aa24.38■■□□□ 1.49
PSEN1-217ENST00000556533 KIAA1210Q9ULL0 1709 aa24.36■■□□□ 1.49
PSEN1-217ENST00000556533 CDC42BPGQ6DT37 1551 aa24.35■■□□□ 1.49
PSEN1-217ENST00000556533 WASLO00401 505 aaPredicted RBP24.32■■□□□ 1.48
PSEN1-217ENST00000556533 CARD11Q9BXL7 1154 aa24.32■■□□□ 1.48
PSEN1-217ENST00000556533 CENPJQ9HC77 1338 aaPredicted RBP24.32■■□□□ 1.48
PSEN1-217ENST00000556533 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
PSEN1-217ENST00000556533 TRPM1Q7Z4N2 1603 aa24.29■■□□□ 1.48
PSEN1-217ENST00000556533 FOXO3O43524 673 aa24.29■■□□□ 1.48
PSEN1-217ENST00000556533 XPCQ01831 940 aaPredicted RBP24.28■■□□□ 1.48
PSEN1-217ENST00000556533 CDK19Q9BWU1 502 aa24.28■■□□□ 1.48
PSEN1-217ENST00000556533 TIMELESSQ9UNS1 1208 aa24.28■■□□□ 1.48
PSEN1-217ENST00000556533 PHF8Q9UPP1 1060 aa24.27■■□□□ 1.48
PSEN1-217ENST00000556533 AHDC1Q5TGY3 1603 aaPredicted RBP24.26■■□□□ 1.47
PSEN1-217ENST00000556533 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
PSEN1-217ENST00000556533 ARHGEF28Q8N1W1 1705 aaKnown RBP24.26■■□□□ 1.47
PSEN1-217ENST00000556533 JCADQ9P266 1359 aa24.26■■□□□ 1.47
PSEN1-217ENST00000556533 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
PSEN1-217ENST00000556533 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
PSEN1-217ENST00000556533 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
PSEN1-217ENST00000556533 DISP3Q9P2K9 1392 aa24.24■■□□□ 1.47
PSEN1-217ENST00000556533 PRR36Q9H6K5 1346 aa24.23■■□□□ 1.47
PSEN1-217ENST00000556533 EIF3AQ14152 1382 aaKnown RBP24.23■■□□□ 1.47
PSEN1-217ENST00000556533 GPRASP1Q5JY77 1395 aa24.23■■□□□ 1.47
PSEN1-217ENST00000556533 RALGAPBQ86X10 1494 aa24.22■■□□□ 1.47
PSEN1-217ENST00000556533 SRPK2P78362 688 aaKnown RBP24.22■■□□□ 1.47
PSEN1-217ENST00000556533 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
PSEN1-217ENST00000556533 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
PSEN1-217ENST00000556533 ADGRB2O60241 1585 aa24.21■■□□□ 1.47
PSEN1-217ENST00000556533 SOS2Q07890 1332 aaPredicted RBP24.21■■□□□ 1.47
PSEN1-217ENST00000556533 ANKARQ7Z5J8 1434 aa24.2■■□□□ 1.46
PSEN1-217ENST00000556533 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
PSEN1-217ENST00000556533 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
PSEN1-217ENST00000556533 PSME1Q06323 249 aa24.2■■□□□ 1.46
PSEN1-217ENST00000556533 KRT28Q7Z3Y7 464 aa24.2■■□□□ 1.46
PSEN1-217ENST00000556533 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
PSEN1-217ENST00000556533 CABP2Q9NPB3 220 aa24.2■■□□□ 1.46
PSEN1-217ENST00000556533 NHSL1Q5SYE7 1610 aa24.17■■□□□ 1.46
PSEN1-217ENST00000556533 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
PSEN1-217ENST00000556533 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-217ENST00000556533 TULP4Q9NRJ4 1543 aa24.16■■□□□ 1.46
PSEN1-217ENST00000556533 EVC2Q86UK5 1308 aa24.15■■□□□ 1.46
PSEN1-217ENST00000556533 SPATA31A6Q5VVP1 1343 aa24.14■■□□□ 1.46
PSEN1-217ENST00000556533 MED1Q15648 1581 aaPredicted RBP24.14■■□□□ 1.45
PSEN1-217ENST00000556533 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
PSEN1-217ENST00000556533 CCDC61Q9Y6R9 512 aa24.14■■□□□ 1.45
PSEN1-217ENST00000556533 LMOD2Q6P5Q4 547 aa24.13■■□□□ 1.45
PSEN1-217ENST00000556533 USP32Q8NFA0 1604 aa24.13■■□□□ 1.45
PSEN1-217ENST00000556533 PLEKHG5O94827 1062 aa24.12■■□□□ 1.45
PSEN1-217ENST00000556533 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
PSEN1-217ENST00000556533 PXDNQ92626 1479 aa24.12■■□□□ 1.45
PSEN1-217ENST00000556533 QRICH2Q9H0J4 1663 aa24.11■■□□□ 1.45
PSEN1-217ENST00000556533 ST20-MTHFSA0A0A6YYL1 179 aa24.11■■□□□ 1.45
PSEN1-217ENST00000556533 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
PSEN1-217ENST00000556533 ATP7BP35670 1465 aa24.1■■□□□ 1.45
PSEN1-217ENST00000556533 KIF1AQ12756 1690 aa24.09■■□□□ 1.45
PSEN1-217ENST00000556533 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.45
PSEN1-217ENST00000556533 SPATA31A3Q5VYP0 1347 aa24.08■■□□□ 1.44
PSEN1-217ENST00000556533 CABP1Q9NZU7 370 aa24.07■■□□□ 1.44
PSEN1-217ENST00000556533 ACEP12821 1306 aa24.07■■□□□ 1.44
PSEN1-217ENST00000556533 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
PSEN1-217ENST00000556533 ADAMTS2O95450 1211 aa24.06■■□□□ 1.44
PSEN1-217ENST00000556533 PPIP5K1Q6PFW1 1433 aa24.05■■□□□ 1.44
PSEN1-217ENST00000556533 USP47Q96K76 1375 aa24.04■■□□□ 1.44
PSEN1-217ENST00000556533 LRP6O75581 1613 aa24.04■■□□□ 1.44
PSEN1-217ENST00000556533 SHPRHQ149N8 1683 aa24.04■■□□□ 1.44
PSEN1-217ENST00000556533 SBNO1A3KN83 1393 aa24.03■■□□□ 1.44
PSEN1-217ENST00000556533 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.44
PSEN1-217ENST00000556533 HAP1P54257 671 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-217ENST00000556533 C8orf37Q96NL8 207 aa24.01■■□□□ 1.43
PSEN1-217ENST00000556533 TESK2Q96S53 571 aa24.01■■□□□ 1.43
PSEN1-217ENST00000556533 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
PSEN1-217ENST00000556533 CABLES1Q8TDN4 633 aa24■■□□□ 1.43
PSEN1-217ENST00000556533 TMC1Q8TDI8 760 aa23.99■■□□□ 1.43
PSEN1-217ENST00000556533 RGS17Q9UGC6 210 aaPredicted RBP23.99■■□□□ 1.43
PSEN1-217ENST00000556533 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
PSEN1-217ENST00000556533 ARHGEF10O15013 1369 aa23.97■■□□□ 1.43
PSEN1-217ENST00000556533 SLC24A1O60721 1099 aa23.97■■□□□ 1.43
PSEN1-217ENST00000556533 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
PSEN1-217ENST00000556533 NGLY1Q96IV0 654 aa23.97■■□□□ 1.43
PSEN1-217ENST00000556533 ITSN1Q15811 1721 aa23.96■■□□□ 1.43
PSEN1-217ENST00000556533 NUTM2GQ5VZR2 741 aa23.96■■□□□ 1.43
PSEN1-217ENST00000556533 TMF1P82094 1093 aa23.95■■□□□ 1.42
PSEN1-217ENST00000556533 ILDR2Q71H61 639 aa23.95■■□□□ 1.42
PSEN1-217ENST00000556533 TOPAZ1Q8N9V7 1692 aa23.93■■□□□ 1.42
PSEN1-217ENST00000556533 AFF2P51816 1311 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms