RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	CLTCL1	P53675	1640 aa		14.2	□□□□□ -0.14
PRKCH-215	ENST00000555382	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14.18	□□□□□ -0.14
PRKCH-215	ENST00000555382	ADAMTS2	O95450	1211 aa		14.18	□□□□□ -0.14
PRKCH-215	ENST00000555382	NGLY1	Q96IV0	654 aa		14.18	□□□□□ -0.14
PRKCH-215	ENST00000555382	MPHOSPH9	Q99550	1183 aa		14.17	□□□□□ -0.14
PRKCH-215	ENST00000555382	ROBO2	Q9HCK4	1378 aa		14.17	□□□□□ -0.14
PRKCH-215	ENST00000555382	PXDN	Q92626	1479 aa		14.17	□□□□□ -0.14
PRKCH-215	ENST00000555382	LRP5	O75197	1615 aa		14.16	□□□□□ -0.14
PRKCH-215	ENST00000555382	USP21	Q9UK80	565 aa		14.16	□□□□□ -0.14
PRKCH-215	ENST00000555382	TRPC5	Q9UL62	973 aa	Predicted RBP	14.16	□□□□□ -0.14
PRKCH-215	ENST00000555382	GLI3	P10071	1580 aa		14.16	□□□□□ -0.14
PRKCH-215	ENST00000555382	CDC42BPG	Q6DT37	1551 aa		14.15	□□□□□ -0.14
PRKCH-215	ENST00000555382	ORAI2	Q96SN7	254 aa		14.14	□□□□□ -0.15
PRKCH-215	ENST00000555382	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.14	□□□□□ -0.15
PRKCH-215	ENST00000555382	ZRANB1	Q9UGI0	708 aa		14.14	□□□□□ -0.15
PRKCH-215	ENST00000555382	CCDC125	Q86Z20	511 aa		14.12	□□□□□ -0.15
PRKCH-215	ENST00000555382	CLSPN	Q9HAW4	1339 aa		14.12	□□□□□ -0.15
PRKCH-215	ENST00000555382	DHX57	Q6P158	1386 aa	Known RBP	14.11	□□□□□ -0.15
PRKCH-215	ENST00000555382	SLIT2	O94813	1529 aa		14.11	□□□□□ -0.15
PRKCH-215	ENST00000555382	BRWD3	Q6RI45	1802 aa		14.11	□□□□□ -0.15
PRKCH-215	ENST00000555382	BLM	P54132	1417 aa	Predicted RBP	14.1	□□□□□ -0.15
PRKCH-215	ENST00000555382	RALGAPB	Q86X10	1494 aa		14.1	□□□□□ -0.15
PRKCH-215	ENST00000555382	KIF1B	O60333	1816 aa		14.09	□□□□□ -0.15
PRKCH-215	ENST00000555382	ANKRD30B	Q9BXX2	1392 aa		14.08	□□□□□ -0.16
PRKCH-215	ENST00000555382	PPL	O60437	1756 aa		14.07	□□□□□ -0.16
PRKCH-215	ENST00000555382	GJD4	Q96KN9	370 aa	Predicted RBP	14.07	□□□□□ -0.16
PRKCH-215	ENST00000555382	USP32	Q8NFA0	1604 aa		14.07	□□□□□ -0.16
PRKCH-215	ENST00000555382	ZNF326	Q5BKZ1	582 aa	Known RBP	14.05	□□□□□ -0.16
PRKCH-215	ENST00000555382	NPHP3	Q7Z494	1330 aa		14.05	□□□□□ -0.16
PRKCH-215	ENST00000555382	TECPR2	O15040	1411 aa		14.05	□□□□□ -0.16
PRKCH-215	ENST00000555382	FOXD1	Q16676	465 aa		14.04	□□□□□ -0.16
PRKCH-215	ENST00000555382	ABCA3	Q99758	1704 aa		14.04	□□□□□ -0.16
PRKCH-215	ENST00000555382	FMN2	Q9NZ56	1722 aa		14.03	□□□□□ -0.16
PRKCH-215	ENST00000555382	KNDC1	Q76NI1	1749 aa		14.02	□□□□□ -0.16
PRKCH-215	ENST00000555382	NWD2	Q9ULI1	1742 aa		14.02	□□□□□ -0.16
PRKCH-215	ENST00000555382	PLCH1	Q4KWH8	1693 aa		14.02	□□□□□ -0.16
PRKCH-215	ENST00000555382	KIF1A	Q12756	1690 aa		14.01	□□□□□ -0.17
PRKCH-215	ENST00000555382	DEFB132	Q7Z7B7	95 aa		14.01	□□□□□ -0.17
PRKCH-215	ENST00000555382	CCDC144A	A2RUR9	1427 aa		14	□□□□□ -0.17
PRKCH-215	ENST00000555382	UNC5CL	Q8IV45	518 aa		14	□□□□□ -0.17
PRKCH-215	ENST00000555382	SPATA31A3	Q5VYP0	1347 aa		13.99	□□□□□ -0.17
PRKCH-215	ENST00000555382	ONECUT3	O60422	494 aa	Predicted RBP	13.99	□□□□□ -0.17
PRKCH-215	ENST00000555382	XPC	Q01831	940 aa	Predicted RBP	13.99	□□□□□ -0.17
PRKCH-215	ENST00000555382	NRAP	Q86VF7	1730 aa		13.98	□□□□□ -0.17
PRKCH-215	ENST00000555382	IFT172	Q9UG01	1749 aa		13.98	□□□□□ -0.17
PRKCH-215	ENST00000555382	VGF	O15240	615 aa	Predicted RBP	13.98	□□□□□ -0.17
PRKCH-215	ENST00000555382	FOXO3	O43524	673 aa		13.98	□□□□□ -0.17
PRKCH-215	ENST00000555382	ESCO1	Q5FWF5	840 aa		13.97	□□□□□ -0.17
PRKCH-215	ENST00000555382	STAC3	Q96MF2	364 aa		13.97	□□□□□ -0.17
PRKCH-215	ENST00000555382	SPATA31E1	Q6ZUB1	1445 aa		13.97	□□□□□ -0.17
PRKCH-215	ENST00000555382	RPGRIP1L	Q68CZ1	1315 aa		13.96	□□□□□ -0.17
PRKCH-215	ENST00000555382	TIMELESS	Q9UNS1	1208 aa		13.96	□□□□□ -0.17
PRKCH-215	ENST00000555382	LRPPRC	P42704	1394 aa	Known RBP	13.96	□□□□□ -0.18
PRKCH-215	ENST00000555382	PLEKHH1	Q9ULM0	1364 aa		13.96	□□□□□ -0.18
PRKCH-215	ENST00000555382	VPS72	Q15906	364 aa		13.95	□□□□□ -0.18
PRKCH-215	ENST00000555382	TNS3	Q68CZ2	1445 aa		13.94	□□□□□ -0.18
PRKCH-215	ENST00000555382	SEPT12	Q8IYM1	358 aa		13.94	□□□□□ -0.18
PRKCH-215	ENST00000555382	TNS1	Q9HBL0	1735 aa	Known RBP	13.94	□□□□□ -0.18
PRKCH-215	ENST00000555382	ABCC11	Q96J66	1382 aa		13.94	□□□□□ -0.18
PRKCH-215	ENST00000555382	RGPD8	O14715	1765 aa	Predicted RBP	13.94	□□□□□ -0.18
PRKCH-215	ENST00000555382	DISP2	A7MBM2	1401 aa		13.93	□□□□□ -0.18
PRKCH-215	ENST00000555382	CCER1	Q8TC90	406 aa	Predicted RBP	13.93	□□□□□ -0.18
PRKCH-215	ENST00000555382	THSD7A	Q9UPZ6	1657 aa		13.92	□□□□□ -0.18
PRKCH-215	ENST00000555382	RGPD1	P0DJD0	1748 aa		13.92	□□□□□ -0.18
PRKCH-215	ENST00000555382	PIK3C2G	O75747	1445 aa		13.91	□□□□□ -0.18
PRKCH-215	ENST00000555382	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKCH-215	ENST00000555382	WAPL	Q7Z5K2	1190 aa		13.91	□□□□□ -0.18
PRKCH-215	ENST00000555382	NRXN1	Q9ULB1	1477 aa		13.91	□□□□□ -0.18
PRKCH-215	ENST00000555382	ADGRF5	Q8IZF2	1346 aa		13.9	□□□□□ -0.18
PRKCH-215	ENST00000555382	CRYBG1	Q9Y4K1	1723 aa		13.9	□□□□□ -0.18
PRKCH-215	ENST00000555382	KRT27	Q7Z3Y8	459 aa		13.9	□□□□□ -0.18
PRKCH-215	ENST00000555382	SBNO1	A3KN83	1393 aa		13.89	□□□□□ -0.19
PRKCH-215	ENST00000555382	PSD	A5PKW4	1024 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKCH-215	ENST00000555382	ALS2	Q96Q42	1657 aa		13.88	□□□□□ -0.19
PRKCH-215	ENST00000555382	NUTM2F	A1L443	756 aa		13.88	□□□□□ -0.19
PRKCH-215	ENST00000555382	KRT28	Q7Z3Y7	464 aa		13.87	□□□□□ -0.19
PRKCH-215	ENST00000555382	CABLES1	Q8TDN4	633 aa		13.87	□□□□□ -0.19
PRKCH-215	ENST00000555382	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.87	□□□□□ -0.19
PRKCH-215	ENST00000555382	SF3B2	Q13435	895 aa	Known RBP	13.86	□□□□□ -0.19
PRKCH-215	ENST00000555382	SIN3A	Q96ST3	1273 aa		13.86	□□□□□ -0.19
PRKCH-215	ENST00000555382	ADGRB2	O60241	1585 aa		13.86	□□□□□ -0.19
PRKCH-215	ENST00000555382	COL14A1	Q05707	1796 aa	Known RBP	13.86	□□□□□ -0.19
PRKCH-215	ENST00000555382	FAM83G	A6ND36	823 aa		13.85	□□□□□ -0.19
PRKCH-215	ENST00000555382	RREB1	Q92766	1687 aa		13.85	□□□□□ -0.19
PRKCH-215	ENST00000555382	ARHGEF10	O15013	1369 aa		13.84	□□□□□ -0.19
PRKCH-215	ENST00000555382	BAG6	P46379	1132 aa		13.84	□□□□□ -0.19
PRKCH-215	ENST00000555382	SIRT1	Q96EB6	747 aa		13.84	□□□□□ -0.19
PRKCH-215	ENST00000555382	STK26	Q9P289	416 aa		13.83	□□□□□ -0.2
PRKCH-215	ENST00000555382	UTRN	P46939	3433 aa		13.83	□□□□□ -0.2
PRKCH-215	ENST00000555382	TONSL	Q96HA7	1378 aa		13.83	□□□□□ -0.2
PRKCH-215	ENST00000555382	TMEM132E	Q6IEE7	984 aa		13.82	□□□□□ -0.2
PRKCH-215	ENST00000555382	PHF8	Q9UPP1	1060 aa		13.82	□□□□□ -0.2
PRKCH-215	ENST00000555382	ANKAR	Q7Z5J8	1434 aa		13.81	□□□□□ -0.2
PRKCH-215	ENST00000555382	NUP188	Q5SRE5	1749 aa		13.81	□□□□□ -0.2
PRKCH-215	ENST00000555382	KIAA1210	Q9ULL0	1709 aa		13.81	□□□□□ -0.2
PRKCH-215	ENST00000555382	EN1	Q05925	392 aa	Predicted RBP	13.81	□□□□□ -0.2
PRKCH-215	ENST00000555382	FAM98C	Q17RN3	349 aa	Known RBP	13.81	□□□□□ -0.2
PRKCH-215	ENST00000555382	L3MBTL2	Q969R5	705 aa		13.81	□□□□□ -0.2
PRKCH-215	ENST00000555382	DLC1	Q96QB1	1528 aa		13.8	□□□□□ -0.2
PRKCH-215	ENST00000555382	NEUROD1	Q13562	356 aa		13.8	□□□□□ -0.2

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