RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 SOCS7O14512 581 aa17.08■□□□□ 0.32
ACTN1-214ENST00000555075 TECPR2O15040 1411 aa17.07■□□□□ 0.32
ACTN1-214ENST00000555075 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
ACTN1-214ENST00000555075 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
ACTN1-214ENST00000555075 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
ACTN1-214ENST00000555075 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-214ENST00000555075 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
ACTN1-214ENST00000555075 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
ACTN1-214ENST00000555075 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-214ENST00000555075 ADGRB1O14514 1584 aa17.05■□□□□ 0.32
ACTN1-214ENST00000555075 DLC1Q96QB1 1528 aa17.04■□□□□ 0.32
ACTN1-214ENST00000555075 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
ACTN1-214ENST00000555075 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
ACTN1-214ENST00000555075 CENPJQ9HC77 1338 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-214ENST00000555075 HIRIP3Q9BW71 556 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-214ENST00000555075 DCCP43146 1447 aa17.03■□□□□ 0.32
ACTN1-214ENST00000555075 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
ACTN1-214ENST00000555075 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.31
ACTN1-214ENST00000555075 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
ACTN1-214ENST00000555075 RALGAPBQ86X10 1494 aa17.01■□□□□ 0.31
ACTN1-214ENST00000555075 PHLPP1O60346 1717 aa17■□□□□ 0.31
ACTN1-214ENST00000555075 ESCO1Q5FWF5 840 aa16.99■□□□□ 0.31
ACTN1-214ENST00000555075 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
ACTN1-214ENST00000555075 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
ACTN1-214ENST00000555075 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-214ENST00000555075 GPRASP1Q5JY77 1395 aa16.96■□□□□ 0.31
ACTN1-214ENST00000555075 CDC42BPGQ6DT37 1551 aa16.95■□□□□ 0.3
ACTN1-214ENST00000555075 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
ACTN1-214ENST00000555075 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
ACTN1-214ENST00000555075 COL16A1Q07092 1604 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-214ENST00000555075 MST1RQ04912 1400 aa16.94■□□□□ 0.3
ACTN1-214ENST00000555075 EVC2Q86UK5 1308 aa16.94■□□□□ 0.3
ACTN1-214ENST00000555075 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
ACTN1-214ENST00000555075 CDK19Q9BWU1 502 aa16.93■□□□□ 0.3
ACTN1-214ENST00000555075 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
ACTN1-214ENST00000555075 AHDC1Q5TGY3 1603 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-214ENST00000555075 JCADQ9P266 1359 aa16.91■□□□□ 0.3
ACTN1-214ENST00000555075 ORAI2Q96SN7 254 aa16.91■□□□□ 0.3
ACTN1-214ENST00000555075 USP47Q96K76 1375 aa16.9■□□□□ 0.3
ACTN1-214ENST00000555075 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.29
ACTN1-214ENST00000555075 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.29
ACTN1-214ENST00000555075 NGDNQ8NEJ9 315 aaKnown RBP16.89■□□□□ 0.29
ACTN1-214ENST00000555075 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
ACTN1-214ENST00000555075 RGS17Q9UGC6 210 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-214ENST00000555075 PHF8Q9UPP1 1060 aa16.89■□□□□ 0.29
ACTN1-214ENST00000555075 ANKARQ7Z5J8 1434 aa16.88■□□□□ 0.29
ACTN1-214ENST00000555075 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
ACTN1-214ENST00000555075 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
ACTN1-214ENST00000555075 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
ACTN1-214ENST00000555075 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
ACTN1-214ENST00000555075 FOXO3O43524 673 aa16.87■□□□□ 0.29
ACTN1-214ENST00000555075 PSME1Q06323 249 aa16.87■□□□□ 0.29
ACTN1-214ENST00000555075 PMFBP1Q8TBY8 1022 aa16.87■□□□□ 0.29
ACTN1-214ENST00000555075 TMF1P82094 1093 aa16.86■□□□□ 0.29
ACTN1-214ENST00000555075 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
ACTN1-214ENST00000555075 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
ACTN1-214ENST00000555075 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
ACTN1-214ENST00000555075 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
ACTN1-214ENST00000555075 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
ACTN1-214ENST00000555075 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
ACTN1-214ENST00000555075 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-214ENST00000555075 DDX17Q92841 729 aaKnown RBP16.84■□□□□ 0.29
ACTN1-214ENST00000555075 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
ACTN1-214ENST00000555075 LRP6O75581 1613 aa16.84■□□□□ 0.29
ACTN1-214ENST00000555075 XPCQ01831 940 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-214ENST00000555075 LMOD2Q6P5Q4 547 aa16.83■□□□□ 0.28
ACTN1-214ENST00000555075 TMC1Q8TDI8 760 aa16.83■□□□□ 0.28
ACTN1-214ENST00000555075 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
ACTN1-214ENST00000555075 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
ACTN1-214ENST00000555075 KRT28Q7Z3Y7 464 aa16.82■□□□□ 0.28
ACTN1-214ENST00000555075 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
ACTN1-214ENST00000555075 SBNO2Q9Y2G9 1366 aa16.81■□□□□ 0.28
ACTN1-214ENST00000555075 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-214ENST00000555075 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
ACTN1-214ENST00000555075 POTEAQ6S8J7 498 aa16.81■□□□□ 0.28
ACTN1-214ENST00000555075 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
ACTN1-214ENST00000555075 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
ACTN1-214ENST00000555075 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
ACTN1-214ENST00000555075 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
ACTN1-214ENST00000555075 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-214ENST00000555075 CABP1Q9NZU7 370 aa16.79■□□□□ 0.28
ACTN1-214ENST00000555075 ATP7BP35670 1465 aa16.78■□□□□ 0.28
ACTN1-214ENST00000555075 ITSN1Q15811 1721 aa16.77■□□□□ 0.28
ACTN1-214ENST00000555075 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-214ENST00000555075 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-214ENST00000555075 PLEKHG5O94827 1062 aa16.77■□□□□ 0.28
ACTN1-214ENST00000555075 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-214ENST00000555075 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-214ENST00000555075 ACEP12821 1306 aa16.76■□□□□ 0.27
ACTN1-214ENST00000555075 TESK2Q96S53 571 aa16.76■□□□□ 0.27
ACTN1-214ENST00000555075 SOS2Q07890 1332 aaPredicted RBP16.75■□□□□ 0.27
ACTN1-214ENST00000555075 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
ACTN1-214ENST00000555075 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
ACTN1-214ENST00000555075 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
ACTN1-214ENST00000555075 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
ACTN1-214ENST00000555075 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-214ENST00000555075 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-214ENST00000555075 PNPLA6Q8IY17 1366 aa16.72■□□□□ 0.27
ACTN1-214ENST00000555075 SBNO1A3KN83 1393 aa16.71■□□□□ 0.27
ACTN1-214ENST00000555075 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 213.2 ms