RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 JCADQ9P266 1359 aa8.59□□□□□ -1.03
TMEM260-205ENST00000554981 NLRP1Q9C000 1473 aa8.58□□□□□ -1.04
TMEM260-205ENST00000554981 TSPY4P0CV99 314 aa8.58□□□□□ -1.04
TMEM260-205ENST00000554981 TSPY10P0CW01 314 aa8.58□□□□□ -1.04
TMEM260-205ENST00000554981 ZNF772Q68DY9 489 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-205ENST00000554981 PHF8Q9UPP1 1060 aa8.58□□□□□ -1.04
TMEM260-205ENST00000554981 KDM5DQ9BY66 1539 aa8.58□□□□□ -1.04
TMEM260-205ENST00000554981 TMEM94Q12767 1356 aa8.58□□□□□ -1.04
TMEM260-205ENST00000554981 CEP152O94986 1710 aa8.57□□□□□ -1.04
TMEM260-205ENST00000554981 FGD6Q6ZV73 1430 aa8.57□□□□□ -1.04
TMEM260-205ENST00000554981 TTLL13PA6NNM8 815 aa8.57□□□□□ -1.04
TMEM260-205ENST00000554981 MROH1Q8NDA8 1641 aa8.56□□□□□ -1.04
TMEM260-205ENST00000554981 LTKP29376 864 aa8.56□□□□□ -1.04
TMEM260-205ENST00000554981 RSPH4AQ5TD94 716 aa8.56□□□□□ -1.04
TMEM260-205ENST00000554981 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-205ENST00000554981 KDM2AQ9Y2K7 1162 aa8.56□□□□□ -1.04
TMEM260-205ENST00000554981 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
TMEM260-205ENST00000554981 ABCC5O15440 1437 aa8.55□□□□□ -1.04
TMEM260-205ENST00000554981 DAPK1P53355 1430 aa8.55□□□□□ -1.04
TMEM260-205ENST00000554981 COL16A1Q07092 1604 aaPredicted RBP8.55□□□□□ -1.04
TMEM260-205ENST00000554981 EIF2AK4Q9P2K8 1649 aaKnown RBP8.55□□□□□ -1.04
TMEM260-205ENST00000554981 PPARGC1BQ86YN6 1023 aaKnown RBP8.55□□□□□ -1.04
TMEM260-205ENST00000554981 KIF15Q9NS87 1388 aa8.55□□□□□ -1.04
TMEM260-205ENST00000554981 SCAF11Q99590 1463 aaKnown RBP8.55□□□□□ -1.04
TMEM260-205ENST00000554981 RGS12O14924 1447 aa8.54□□□□□ -1.04
TMEM260-205ENST00000554981 ABCC3O15438 1527 aa8.54□□□□□ -1.04
TMEM260-205ENST00000554981 CFAP65Q6ZU64 1925 aaKnown RBP8.54□□□□□ -1.04
TMEM260-205ENST00000554981 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-205ENST00000554981 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-205ENST00000554981 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-205ENST00000554981 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-205ENST00000554981 CHIC2Q9UKJ5 165 aa8.54□□□□□ -1.04
TMEM260-205ENST00000554981 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
TMEM260-205ENST00000554981 UBR1Q8IWV7 1749 aa8.54□□□□□ -1.04
TMEM260-205ENST00000554981 DUOX2Q9NRD8 1548 aa8.54□□□□□ -1.04
TMEM260-205ENST00000554981 CDK12Q9NYV4 1490 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-205ENST00000554981 FAM50AQ14320 339 aaKnown RBP8.53□□□□□ -1.04
TMEM260-205ENST00000554981 TXNDC2Q86VQ3 553 aa8.53□□□□□ -1.04
TMEM260-205ENST00000554981 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-205ENST00000554981 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
TMEM260-205ENST00000554981 FBXO22Q8NEZ5 403 aa8.52□□□□□ -1.05
TMEM260-205ENST00000554981 DCBLD2Q96PD2 775 aa8.52□□□□□ -1.05
TMEM260-205ENST00000554981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.52□□□□□ -1.05
TMEM260-205ENST00000554981 SLAIN2Q9P270 581 aa8.52□□□□□ -1.05
TMEM260-205ENST00000554981 EP400Q96L91 3159 aa8.52□□□□□ -1.05
TMEM260-205ENST00000554981 SPATA31A6Q5VVP1 1343 aa8.52□□□□□ -1.05
TMEM260-205ENST00000554981 AFF2P51816 1311 aa8.51□□□□□ -1.05
TMEM260-205ENST00000554981 PRDM15P57071 1507 aaPredicted RBP8.5□□□□□ -1.05
TMEM260-205ENST00000554981 ERBINQ96RT1 1412 aa8.5□□□□□ -1.05
TMEM260-205ENST00000554981 ERVK-7P63135 1459 aa8.5□□□□□ -1.05
TMEM260-205ENST00000554981 PPP1R37O75864 691 aa8.49□□□□□ -1.05
TMEM260-205ENST00000554981 ATN1P54259 1190 aaPredicted RBP8.49□□□□□ -1.05
TMEM260-205ENST00000554981 SLC26A8Q96RN1 970 aa8.49□□□□□ -1.05
TMEM260-205ENST00000554981 WDR70Q9NW82 654 aa8.49□□□□□ -1.05
TMEM260-205ENST00000554981 ARHGAP23Q9P227 1491 aa8.49□□□□□ -1.05
TMEM260-205ENST00000554981 SHPRHQ149N8 1683 aa8.49□□□□□ -1.05
TMEM260-205ENST00000554981 MSH6P52701 1360 aa8.48□□□□□ -1.05
TMEM260-205ENST00000554981 ANKRD30AQ9BXX3 1397 aa8.48□□□□□ -1.05
TMEM260-205ENST00000554981 ATMINO43313 823 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-205ENST00000554981 KCNA6P17658 529 aa8.48□□□□□ -1.05
TMEM260-205ENST00000554981 QTRT2Q9H974 415 aaKnown RBP8.48□□□□□ -1.05
TMEM260-205ENST00000554981 SLIT1O75093 1534 aa8.48□□□□□ -1.05
TMEM260-205ENST00000554981 ADGRL2O95490 1459 aa8.47□□□□□ -1.05
TMEM260-205ENST00000554981 ITGAEP38570 1179 aa8.47□□□□□ -1.05
TMEM260-205ENST00000554981 ASTLQ6HA08 431 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-205ENST00000554981 BCANQ96GW7 911 aa8.47□□□□□ -1.05
TMEM260-205ENST00000554981 EID1Q9Y6B2 187 aa8.47□□□□□ -1.05
TMEM260-205ENST00000554981 RBM6P78332 1123 aaKnown RBP8.46□□□□□ -1.06
TMEM260-205ENST00000554981 MS4A4AQ96JQ5 239 aa8.46□□□□□ -1.06
TMEM260-205ENST00000554981 C8orf37Q96NL8 207 aa8.46□□□□□ -1.06
TMEM260-205ENST00000554981 KANK1Q14678 1352 aa8.46□□□□□ -1.06
TMEM260-205ENST00000554981 ATAD2Q6PL18 1390 aa8.46□□□□□ -1.06
TMEM260-205ENST00000554981 KDM5AP29375 1690 aaKnown RBP8.45□□□□□ -1.06
TMEM260-205ENST00000554981 DIP2AQ14689 1571 aa8.44□□□□□ -1.06
TMEM260-205ENST00000554981 PIK3C2BO00750 1634 aa8.44□□□□□ -1.06
TMEM260-205ENST00000554981 AHDC1Q5TGY3 1603 aaPredicted RBP8.44□□□□□ -1.06
TMEM260-205ENST00000554981 LHX8Q68G74 356 aa8.44□□□□□ -1.06
TMEM260-205ENST00000554981 ANKRD50Q9ULJ7 1429 aa8.44□□□□□ -1.06
TMEM260-205ENST00000554981 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
TMEM260-205ENST00000554981 NWD1Q149M9 1564 aa8.44□□□□□ -1.06
TMEM260-205ENST00000554981 G3V3G9 751 aa8.43□□□□□ -1.06
TMEM260-205ENST00000554981 SEC24BO95487 1268 aa8.43□□□□□ -1.06
TMEM260-205ENST00000554981 IER5LQ5T953 404 aa8.43□□□□□ -1.06
TMEM260-205ENST00000554981 CADPS2Q86UW7 1296 aa8.43□□□□□ -1.06
TMEM260-205ENST00000554981 OCEL1Q9H607 264 aa8.43□□□□□ -1.06
TMEM260-205ENST00000554981 TMEM2Q9UHN6 1383 aa8.43□□□□□ -1.06
TMEM260-205ENST00000554981 NKTRP30414 1462 aaKnown RBP8.43□□□□□ -1.06
TMEM260-205ENST00000554981 TET3O43151 1660 aa8.43□□□□□ -1.06
TMEM260-205ENST00000554981 PLCG2P16885 1265 aa8.42□□□□□ -1.06
TMEM260-205ENST00000554981 PELP1Q8IZL8 1130 aaKnown RBP8.42□□□□□ -1.06
TMEM260-205ENST00000554981 ARHGAP31Q2M1Z3 1444 aa8.42□□□□□ -1.06
TMEM260-205ENST00000554981 LMTK2Q8IWU2 1503 aa8.42□□□□□ -1.06
TMEM260-205ENST00000554981 UNC13BO14795 1591 aa8.42□□□□□ -1.06
TMEM260-205ENST00000554981 LRP5O75197 1615 aa8.41□□□□□ -1.06
TMEM260-205ENST00000554981 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
TMEM260-205ENST00000554981 MYO5BQ9ULV0 1848 aa8.4□□□□□ -1.06
TMEM260-205ENST00000554981 GCC2Q8IWJ2 1684 aa8.4□□□□□ -1.06
TMEM260-205ENST00000554981 NGLY1Q96IV0 654 aa8.4□□□□□ -1.06
TMEM260-205ENST00000554981 ADAMTS2O95450 1211 aa8.39□□□□□ -1.07
TMEM260-205ENST00000554981 PDE4AP27815 886 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 457.3 ms