RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ANP32CO43423 234 aa15□□□□□ -0.01
PABPN1-203ENST00000553960 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
PABPN1-203ENST00000553960 PRAM1Q96QH2 718 aa14.98□□□□□ -0.01
PABPN1-203ENST00000553960 NCOA3Q9Y6Q9 1424 aa14.98□□□□□ -0.01
PABPN1-203ENST00000553960 ROBO2Q9HCK4 1378 aa14.98□□□□□ -0.01
PABPN1-203ENST00000553960 LMTK3Q96Q04 1460 aa14.97□□□□□ -0.01
PABPN1-203ENST00000553960 RALBP1Q15311 655 aa14.97□□□□□ -0.01
PABPN1-203ENST00000553960 PARD3Q8TEW0 1356 aa14.96□□□□□ -0.02
PABPN1-203ENST00000553960 NKTRP30414 1462 aaKnown RBP14.95□□□□□ -0.02
PABPN1-203ENST00000553960 POGKQ9P215 609 aa14.95□□□□□ -0.02
PABPN1-203ENST00000553960 ANKRD36BQ8N2N9 1353 aa14.95□□□□□ -0.02
PABPN1-203ENST00000553960 ATP7BP35670 1465 aa14.95□□□□□ -0.02
PABPN1-203ENST00000553960 NSD2O96028 1365 aa14.94□□□□□ -0.02
PABPN1-203ENST00000553960 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.93□□□□□ -0.02
PABPN1-203ENST00000553960 WASLO00401 505 aaPredicted RBP14.93□□□□□ -0.02
PABPN1-203ENST00000553960 PANK3Q9H999 370 aa14.93□□□□□ -0.02
PABPN1-203ENST00000553960 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
PABPN1-203ENST00000553960 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
PABPN1-203ENST00000553960 KCNA6P17658 529 aa14.92□□□□□ -0.02
PABPN1-203ENST00000553960 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
PABPN1-203ENST00000553960 STK26Q9P289 416 aa14.92□□□□□ -0.02
PABPN1-203ENST00000553960 INSRP06213 1382 aa14.92□□□□□ -0.02
PABPN1-203ENST00000553960 CDC42BPGQ6DT37 1551 aa14.91□□□□□ -0.02
PABPN1-203ENST00000553960 PLEKHH1Q9ULM0 1364 aa14.91□□□□□ -0.02
PABPN1-203ENST00000553960 SLC26A8Q96RN1 970 aa14.91□□□□□ -0.02
PABPN1-203ENST00000553960 CPSF1Q10570 1443 aaKnown RBP14.91□□□□□ -0.02
PABPN1-203ENST00000553960 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
PABPN1-203ENST00000553960 CD163L1Q9NR16 1453 aa14.89□□□□□ -0.03
PABPN1-203ENST00000553960 BRD4O60885 1362 aaPredicted RBP14.89□□□□□ -0.03
PABPN1-203ENST00000553960 CDK19Q9BWU1 502 aa14.89□□□□□ -0.03
PABPN1-203ENST00000553960 STRCQ7RTU9 1775 aa14.88□□□□□ -0.03
PABPN1-203ENST00000553960 WAPLQ7Z5K2 1190 aa14.88□□□□□ -0.03
PABPN1-203ENST00000553960 TERF2IPQ9NYB0 399 aa14.88□□□□□ -0.03
PABPN1-203ENST00000553960 KNSTRNQ9Y448 316 aa14.88□□□□□ -0.03
PABPN1-203ENST00000553960 CCDC61Q9Y6R9 512 aa14.88□□□□□ -0.03
PABPN1-203ENST00000553960 DCCP43146 1447 aa14.87□□□□□ -0.03
PABPN1-203ENST00000553960 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
PABPN1-203ENST00000553960 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
PABPN1-203ENST00000553960 ITSN1Q15811 1721 aa14.86□□□□□ -0.03
PABPN1-203ENST00000553960 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
PABPN1-203ENST00000553960 BCANQ96GW7 911 aa14.86□□□□□ -0.03
PABPN1-203ENST00000553960 CARD14Q9BXL6 1004 aa14.86□□□□□ -0.03
PABPN1-203ENST00000553960 MINK1Q8N4C8 1332 aaPredicted RBP14.86□□□□□ -0.03
PABPN1-203ENST00000553960 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
PABPN1-203ENST00000553960 FMN2Q9NZ56 1722 aa14.85□□□□□ -0.03
PABPN1-203ENST00000553960 AKAP12Q02952 1782 aa14.85□□□□□ -0.03
PABPN1-203ENST00000553960 NLRP13Q86W25 1043 aa14.84□□□□□ -0.03
PABPN1-203ENST00000553960 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
PABPN1-203ENST00000553960 CGNL1Q0VF96 1302 aa14.84□□□□□ -0.03
PABPN1-203ENST00000553960 POLR3AO14802 1390 aaPredicted RBP14.84□□□□□ -0.03
PABPN1-203ENST00000553960 MON2Q7Z3U7 1717 aa14.83□□□□□ -0.03
PABPN1-203ENST00000553960 SRPK2P78362 688 aaKnown RBP14.83□□□□□ -0.04
PABPN1-203ENST00000553960 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
PABPN1-203ENST00000553960 ANKRD26Q9UPS8 1709 aa14.83□□□□□ -0.04
PABPN1-203ENST00000553960 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.04
PABPN1-203ENST00000553960 NUDT16Q96DE0 195 aaKnown RBP14.82□□□□□ -0.04
PABPN1-203ENST00000553960 CABP2Q9NPB3 220 aa14.82□□□□□ -0.04
PABPN1-203ENST00000553960 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
PABPN1-203ENST00000553960 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
PABPN1-203ENST00000553960 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
PABPN1-203ENST00000553960 NALCNQ8IZF0 1738 aa14.81□□□□□ -0.04
PABPN1-203ENST00000553960 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
PABPN1-203ENST00000553960 SSH2Q76I76 1423 aa14.81□□□□□ -0.04
PABPN1-203ENST00000553960 HDGFL2Q7Z4V5 671 aaPredicted RBP14.8□□□□□ -0.04
PABPN1-203ENST00000553960 NSD3Q9BZ95 1437 aa14.8□□□□□ -0.04
PABPN1-203ENST00000553960 PPIP5K1Q6PFW1 1433 aa14.79□□□□□ -0.04
PABPN1-203ENST00000553960 LRRC7Q96NW7 1537 aa14.79□□□□□ -0.04
PABPN1-203ENST00000553960 POLR3GLQ9BT43 218 aa14.79□□□□□ -0.04
PABPN1-203ENST00000553960 PRR36Q9H6K5 1346 aa14.79□□□□□ -0.04
PABPN1-203ENST00000553960 USP54Q70EL1 1684 aa14.78□□□□□ -0.04
PABPN1-203ENST00000553960 NRKQ7Z2Y5 1582 aa14.78□□□□□ -0.04
PABPN1-203ENST00000553960 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
PABPN1-203ENST00000553960 CABP1Q9NZU7 370 aa14.77□□□□□ -0.05
PABPN1-203ENST00000553960 STRCP1A6NGW2 1772 aa14.77□□□□□ -0.05
PABPN1-203ENST00000553960 MST1RQ04912 1400 aa14.76□□□□□ -0.05
PABPN1-203ENST00000553960 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
PABPN1-203ENST00000553960 C19orf44Q9H6X5 657 aa14.76□□□□□ -0.05
PABPN1-203ENST00000553960 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
PABPN1-203ENST00000553960 KIF20BQ96Q89 1820 aa14.75□□□□□ -0.05
PABPN1-203ENST00000553960 USP6P35125 1406 aa14.75□□□□□ -0.05
PABPN1-203ENST00000553960 AATKQ6ZMQ8 1374 aa14.74□□□□□ -0.05
PABPN1-203ENST00000553960 TTC21AQ8NDW8 1320 aa14.74□□□□□ -0.05
PABPN1-203ENST00000553960 FYB1O15117 783 aa14.74□□□□□ -0.05
PABPN1-203ENST00000553960 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
PABPN1-203ENST00000553960 PPP2R1AP30153 589 aa14.73□□□□□ -0.05
PABPN1-203ENST00000553960 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
PABPN1-203ENST00000553960 PNPLA6Q8IY17 1366 aa14.72□□□□□ -0.05
PABPN1-203ENST00000553960 KIF1AQ12756 1690 aa14.71□□□□□ -0.05
PABPN1-203ENST00000553960 HSPA2P54652 639 aa14.71□□□□□ -0.05
PABPN1-203ENST00000553960 MRS2Q9HD23 443 aa14.71□□□□□ -0.05
PABPN1-203ENST00000553960 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
PABPN1-203ENST00000553960 XIRP1Q702N8 1843 aaKnown RBP14.7□□□□□ -0.06
PABPN1-203ENST00000553960 RGPD8O14715 1765 aaPredicted RBP14.7□□□□□ -0.06
PABPN1-203ENST00000553960 ACEP12821 1306 aa14.69□□□□□ -0.06
PABPN1-203ENST00000553960 CC2D1BQ5T0F9 858 aaKnown RBP14.69□□□□□ -0.06
PABPN1-203ENST00000553960 PROSER2Q86WR7 435 aaPredicted RBP14.69□□□□□ -0.06
PABPN1-203ENST00000553960 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
PABPN1-203ENST00000553960 OVOS2A0A0J9YW53 1432 aa14.68□□□□□ -0.06
PABPN1-203ENST00000553960 OVOS2Q6IE36 1432 aa14.68□□□□□ -0.06
PABPN1-203ENST00000553960 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms