RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 DDIT3P35638 169 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 ITPRIPQ8IWB1 547 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 GAS2L2Q8NHY3 880 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 CNKSR2Q8WXI2 1034 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 CCDC144AA2RUR9 1427 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 WDR62O43379 1518 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 LAMC3Q9Y6N6 1575 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 ISY1Q9ULR0 285 aaKnown RBP8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 PDS5BQ9NTI5 1447 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 INSRP06213 1382 aa8.48□□□□□ -1.05
RPGRIP1-204ENST00000553927 DNTTIP2Q5QJE6 756 aaKnown RBP8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 KDM5DQ9BY66 1539 aa8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 PRIM1P49642 420 aaKnown RBP8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 PKP1Q13835 747 aa8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 SMAP1Q8IYB5 467 aaPredicted RBP8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 TRHP20396 242 aaPredicted RBP8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 SKOR2Q2VWA4 1001 aaPredicted RBP8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 TSR2Q969E8 191 aaKnown RBP8.47□□□□□ -1.05
RPGRIP1-204ENST00000553927 GOLGA6L22H0YM25 854 aa8.46□□□□□ -1.05
RPGRIP1-204ENST00000553927 PDE4CQ08493 712 aa8.46□□□□□ -1.05
RPGRIP1-204ENST00000553927 ZSCAN23Q3MJ62 389 aa8.46□□□□□ -1.05
RPGRIP1-204ENST00000553927 SMC5Q8IY18 1101 aa8.46□□□□□ -1.05
RPGRIP1-204ENST00000553927 C17orf53Q8N3J3 647 aaPredicted RBP8.46□□□□□ -1.05
RPGRIP1-204ENST00000553927 TRPM1Q7Z4N2 1603 aa8.46□□□□□ -1.06
RPGRIP1-204ENST00000553927 BAG4O95429 457 aaKnown RBP8.46□□□□□ -1.06
RPGRIP1-204ENST00000553927 TSPY4P0CV99 314 aa8.46□□□□□ -1.06
RPGRIP1-204ENST00000553927 TSPY10P0CW01 314 aa8.46□□□□□ -1.06
RPGRIP1-204ENST00000553927 A2MP01023 1474 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 WDR7Q9Y4E6 1490 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 SPDYE4A6NLX3 237 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 PTMAP06454 111 aaKnown RBP8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 MVPQ14764 893 aaKnown RBP8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 ZNF830Q96NB3 372 aaPredicted RBP8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 MAP7D2Q96T17 732 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 DNAJC5Q9H3Z4 198 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 NOL7Q9UMY1 257 aaKnown RBP8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 AK9Q5TCS8 1911 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 FAM135AQ9P2D6 1515 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 TCP11L2Q8N4U5 519 aa8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 NUP153P49790 1475 aaKnown RBP8.45□□□□□ -1.06
RPGRIP1-204ENST00000553927 VGLL3A8MV65 326 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 ZSCAN20P17040 1043 aaPredicted RBP8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 C9orf84Q5VXU9 1444 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 CEP170Q5SW79 1584 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 NCOA3Q9Y6Q9 1424 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 SYCE3A1L190 88 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 PRPF40AO75400 957 aaKnown RBP8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 DMTNQ08495 405 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 KLHL40Q2TBA0 621 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 DZIP1LQ8IYY4 767 aaKnown RBP8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 KIF2CQ99661 725 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 BCL11BQ9C0K0 894 aaPredicted RBP8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 SMC4Q9NTJ3 1288 aa8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 GPATCH8Q9UKJ3 1502 aaKnown RBP8.44□□□□□ -1.06
RPGRIP1-204ENST00000553927 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 ZKSCAN5Q9Y2L8 839 aa8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 DYNC1I1O14576 645 aa8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 CCDC94Q9BW85 323 aaPredicted RBP8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 CHMP4BQ9H444 224 aaKnown RBP8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 ZNF500O60304 480 aaPredicted RBP8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 SASS6Q6UVJ0 657 aa8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 NSFL1CQ9UNZ2 370 aaKnown RBP8.43□□□□□ -1.06
RPGRIP1-204ENST00000553927 ADGBQ8N7X0 1667 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 TRIM27P14373 513 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 ATP2B3Q16720 1220 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 PPP4R3BQ5MIZ7 849 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 ZKSCAN2Q63HK3 967 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 CIZ1Q9ULV3 898 aaPredicted RBP8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 IQGAP2Q13576 1575 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 NINLQ9Y2I6 1382 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 RBM25P49756 843 aaKnown RBP8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 SNX21Q969T3 373 aa8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 URB2Q14146 1524 aaKnown RBP8.42□□□□□ -1.06
RPGRIP1-204ENST00000553927 PRDM15P57071 1507 aaPredicted RBP8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 GPRASP1Q5JY77 1395 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 ASXL1Q8IXJ9 1541 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 ANKRD45Q5TZF3 282 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 TMEM57Q8N5G2 664 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 GPT2Q8TD30 523 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 ADGRL2O95490 1459 aa8.41□□□□□ -1.06
RPGRIP1-204ENST00000553927 PIK3C2GO75747 1445 aa8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 TERF1P54274 439 aa8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 ZGPATQ8N5A5 531 aaKnown RBP8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 LMBRD1Q9NUN5 540 aa8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 CLASP1Q7Z460 1538 aa8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 TBC1D9Q6ZT07 1266 aa8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 TMEM63CQ9P1W3 806 aa8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.4□□□□□ -1.06
RPGRIP1-204ENST00000553927 TROQ12816 1431 aaPredicted RBP8.4□□□□□ -1.07
RPGRIP1-204ENST00000553927 ZNF445P59923 1031 aa8.4□□□□□ -1.07
RPGRIP1-204ENST00000553927 EXOSC9Q06265 439 aaKnown RBP8.4□□□□□ -1.07
RPGRIP1-204ENST00000553927 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.07
RPGRIP1-204ENST00000553927 STAC3Q96MF2 364 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms