RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 TOR4AQ9NXH8 423 aa8.95□□□□□ -0.98
SEC23A-205ENST00000553925 THAP11Q96EK4 314 aa8.94□□□□□ -0.98
SEC23A-205ENST00000553925 WFS1O76024 890 aa8.93□□□□□ -0.98
SEC23A-205ENST00000553925 SULF1Q8IWU6 871 aa8.93□□□□□ -0.98
SEC23A-205ENST00000553925 GCGRP47871 477 aa8.92□□□□□ -0.98
SEC23A-205ENST00000553925 RNF19BQ6ZMZ0 732 aa8.92□□□□□ -0.98
SEC23A-205ENST00000553925 CRIPAKQ8N1N5 446 aa8.92□□□□□ -0.98
SEC23A-205ENST00000553925 SLC24A3Q9HC58 644 aa8.92□□□□□ -0.98
SEC23A-205ENST00000553925 GPR37O15354 613 aa8.91□□□□□ -0.98
SEC23A-205ENST00000553925 CTC1Q2NKJ3 1217 aa8.91□□□□□ -0.98
SEC23A-205ENST00000553925 KRI1Q8N9T8 703 aaKnown RBP8.91□□□□□ -0.98
SEC23A-205ENST00000553925 AVPP01185 164 aa8.9□□□□□ -0.98
SEC23A-205ENST00000553925 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.98
SEC23A-205ENST00000553925 BRICD5Q6PL45 260 aa8.9□□□□□ -0.98
SEC23A-205ENST00000553925 AK7Q96M32 723 aa8.88□□□□□ -0.99
SEC23A-205ENST00000553925 TRIM32Q13049 653 aa8.87□□□□□ -0.99
SEC23A-205ENST00000553925 MSS51Q4VC12 460 aa8.87□□□□□ -0.99
SEC23A-205ENST00000553925 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
SEC23A-205ENST00000553925 PHOX2BQ99453 314 aa8.87□□□□□ -0.99
SEC23A-205ENST00000553925 MAP2K5Q13163 448 aa8.86□□□□□ -0.99
SEC23A-205ENST00000553925 Q3C1V9 767 aa8.86□□□□□ -0.99
SEC23A-205ENST00000553925 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
SEC23A-205ENST00000553925 SNIP1Q8TAD8 396 aaKnown RBP8.86□□□□□ -0.99
SEC23A-205ENST00000553925 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
SEC23A-205ENST00000553925 MINK1Q8N4C8 1332 aaPredicted RBP8.85□□□□□ -0.99
SEC23A-205ENST00000553925 WNT7AO00755 349 aa8.85□□□□□ -0.99
SEC23A-205ENST00000553925 SMPD1P17405 629 aa8.85□□□□□ -0.99
SEC23A-205ENST00000553925 MRGPRX2Q96LB1 330 aa8.85□□□□□ -0.99
SEC23A-205ENST00000553925 J3QL48 77 aa8.84□□□□□ -0.99
SEC23A-205ENST00000553925 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
SEC23A-205ENST00000553925 ATP13A2Q9NQ11 1180 aa8.84□□□□□ -0.99
SEC23A-205ENST00000553925 SNRPBP14678 240 aaKnown RBP8.83□□□□□ -1
SEC23A-205ENST00000553925 NFX1Q12986 1120 aaKnown RBP8.82□□□□□ -1
SEC23A-205ENST00000553925 NEUROD2Q15784 382 aa8.82□□□□□ -1
SEC23A-205ENST00000553925 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
SEC23A-205ENST00000553925 CCDC102AQ96A19 550 aa8.81□□□□□ -1
SEC23A-205ENST00000553925 IRF6O14896 467 aa8.8□□□□□ -1
SEC23A-205ENST00000553925 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
SEC23A-205ENST00000553925 HPS1Q92902 700 aa8.8□□□□□ -1
SEC23A-205ENST00000553925 USB1Q9BQ65 265 aaKnown RBP8.8□□□□□ -1
SEC23A-205ENST00000553925 SENP2Q9HC62 589 aa8.8□□□□□ -1
SEC23A-205ENST00000553925 TRIM66O15016 1216 aa8.79□□□□□ -1
SEC23A-205ENST00000553925 KDM4AO75164 1064 aa8.79□□□□□ -1
SEC23A-205ENST00000553925 MMP16P51512 607 aa8.79□□□□□ -1
SEC23A-205ENST00000553925 HLA-CQ95604 372 aa8.79□□□□□ -1
SEC23A-205ENST00000553925 REPIN1Q9BWE0 567 aaKnown RBP8.79□□□□□ -1
SEC23A-205ENST00000553925 STK17AQ9UEE5 414 aa8.79□□□□□ -1
SEC23A-205ENST00000553925 RC3H1Q5TC82 1133 aaKnown RBP8.78□□□□□ -1
SEC23A-205ENST00000553925 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
SEC23A-205ENST00000553925 CD46P15529 392 aa8.77□□□□□ -1.01
SEC23A-205ENST00000553925 MDM2Q00987 491 aaPredicted RBP8.77□□□□□ -1.01
SEC23A-205ENST00000553925 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
SEC23A-205ENST00000553925 DXOO77932 396 aaKnown RBP8.76□□□□□ -1.01
SEC23A-205ENST00000553925 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
SEC23A-205ENST00000553925 PDE4DQ08499 809 aa8.75□□□□□ -1.01
SEC23A-205ENST00000553925 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
SEC23A-205ENST00000553925 KIFC2Q96AC6 838 aa8.75□□□□□ -1.01
SEC23A-205ENST00000553925 WIPF1O43516 503 aa8.74□□□□□ -1.01
SEC23A-205ENST00000553925 SKOR1P84550 965 aa8.74□□□□□ -1.01
SEC23A-205ENST00000553925 GUCA2AQ02747 115 aa8.74□□□□□ -1.01
SEC23A-205ENST00000553925 AMHR2Q16671 573 aa8.74□□□□□ -1.01
SEC23A-205ENST00000553925 USP46P62068 366 aa8.72□□□□□ -1.01
SEC23A-205ENST00000553925 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
SEC23A-205ENST00000553925 HOXA2O43364 376 aa8.71□□□□□ -1.02
SEC23A-205ENST00000553925 WNT7BP56706 349 aa8.71□□□□□ -1.02
SEC23A-205ENST00000553925 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
SEC23A-205ENST00000553925 SLC16A10Q8TF71 515 aa8.71□□□□□ -1.02
SEC23A-205ENST00000553925 WASF2Q9Y6W5 498 aa8.71□□□□□ -1.02
SEC23A-205ENST00000553925 BMP1P13497 986 aa8.7□□□□□ -1.02
SEC23A-205ENST00000553925 JUNDP17535 347 aa8.7□□□□□ -1.02
SEC23A-205ENST00000553925 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
SEC23A-205ENST00000553925 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
SEC23A-205ENST00000553925 KDM4CQ9H3R0 1056 aa8.7□□□□□ -1.02
SEC23A-205ENST00000553925 GPBP1L1Q9HC44 474 aaPredicted RBP8.7□□□□□ -1.02
SEC23A-205ENST00000553925 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
SEC23A-205ENST00000553925 PARP9Q8IXQ6 854 aa8.68□□□□□ -1.02
SEC23A-205ENST00000553925 NUDT12Q9BQG2 462 aa8.68□□□□□ -1.02
SEC23A-205ENST00000553925 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
SEC23A-205ENST00000553925 CLCN1P35523 988 aa8.67□□□□□ -1.02
SEC23A-205ENST00000553925 VEGFBP49765 207 aa8.67□□□□□ -1.02
SEC23A-205ENST00000553925 C6orf229H3BNL8 230 aa8.66□□□□□ -1.02
SEC23A-205ENST00000553925 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.02
SEC23A-205ENST00000553925 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.02
SEC23A-205ENST00000553925 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
SEC23A-205ENST00000553925 GIGYF2Q6Y7W6 1299 aaKnown RBP8.64□□□□□ -1.03
SEC23A-205ENST00000553925 DDRGK1Q96HY6 314 aa8.64□□□□□ -1.03
SEC23A-205ENST00000553925 GPCPD1Q9NPB8 672 aa8.64□□□□□ -1.03
SEC23A-205ENST00000553925 NXF1Q9UBU9 619 aaKnown RBP8.64□□□□□ -1.03
SEC23A-205ENST00000553925 GMPRP36959 345 aa8.63□□□□□ -1.03
SEC23A-205ENST00000553925 TRIM46Q7Z4K8 759 aa8.63□□□□□ -1.03
SEC23A-205ENST00000553925 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
SEC23A-205ENST00000553925 FDX1P10109 184 aa8.62□□□□□ -1.03
SEC23A-205ENST00000553925 MS4A1P11836 297 aa8.62□□□□□ -1.03
SEC23A-205ENST00000553925 IRF7Q92985 503 aa8.61□□□□□ -1.03
SEC23A-205ENST00000553925 SIAH2O43255 324 aa8.6□□□□□ -1.03
SEC23A-205ENST00000553925 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
SEC23A-205ENST00000553925 SH3BP2P78314 561 aa8.6□□□□□ -1.03
SEC23A-205ENST00000553925 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
SEC23A-205ENST00000553925 FAM217BQ9NTX9 383 aaPredicted RBP8.6□□□□□ -1.03
SEC23A-205ENST00000553925 TLL2Q9Y6L7 1015 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms