RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 NEUROD1Q13562 356 aa29.56■■■□□ 2.32
XRCC3-205ENST00000553807 DLC1Q96QB1 1528 aa29.54■■■□□ 2.32
XRCC3-205ENST00000553807 PRAM1Q96QH2 718 aa29.52■■■□□ 2.32
XRCC3-205ENST00000553807 SAFB2Q14151 953 aaKnown RBP eCLIP29.51■■■□□ 2.31
XRCC3-205ENST00000553807 SIRT1Q96EB6 747 aa29.51■■■□□ 2.31
XRCC3-205ENST00000553807 TRAK1Q9UPV9 953 aa29.51■■■□□ 2.31
XRCC3-205ENST00000553807 NHSL1Q5SYE7 1610 aa29.5■■■□□ 2.31
XRCC3-205ENST00000553807 L3MBTL2Q969R5 705 aa29.49■■■□□ 2.31
XRCC3-205ENST00000553807 POGKQ9P215 609 aa29.49■■■□□ 2.31
XRCC3-205ENST00000553807 KIAA1210Q9ULL0 1709 aa29.48■■■□□ 2.31
XRCC3-205ENST00000553807 FMN2Q9NZ56 1722 aa29.46■■■□□ 2.31
XRCC3-205ENST00000553807 JCADQ9P266 1359 aa29.46■■■□□ 2.31
XRCC3-205ENST00000553807 NUTM2FA1L443 756 aa29.45■■■□□ 2.31
XRCC3-205ENST00000553807 DDX17Q92841 729 aaKnown RBP29.45■■■□□ 2.31
XRCC3-205ENST00000553807 ORAI2Q96SN7 254 aa29.45■■■□□ 2.31
XRCC3-205ENST00000553807 ARHGEF28Q8N1W1 1705 aaKnown RBP29.43■■■□□ 2.3
XRCC3-205ENST00000553807 ESCO1Q5FWF5 840 aa29.4■■■□□ 2.3
XRCC3-205ENST00000553807 PHF23Q9BUL5 403 aaPredicted RBP29.4■■■□□ 2.3
XRCC3-205ENST00000553807 ADGRB2O60241 1585 aa29.39■■■□□ 2.3
XRCC3-205ENST00000553807 PCGF6Q9BYE7 350 aa29.39■■■□□ 2.3
XRCC3-205ENST00000553807 SHPRHQ149N8 1683 aa29.38■■■□□ 2.29
XRCC3-205ENST00000553807 NBPF1Q3BBV0 1214 aa29.38■■■□□ 2.29
XRCC3-205ENST00000553807 HIRIP3Q9BW71 556 aaPredicted RBP29.37■■■□□ 2.29
XRCC3-205ENST00000553807 MINK1Q8N4C8 1332 aaPredicted RBP29.37■■■□□ 2.29
XRCC3-205ENST00000553807 TONSLQ96HA7 1378 aa29.35■■■□□ 2.29
XRCC3-205ENST00000553807 TRPM1Q7Z4N2 1603 aa29.33■■■□□ 2.29
XRCC3-205ENST00000553807 KIF1AQ12756 1690 aa29.31■■■□□ 2.28
XRCC3-205ENST00000553807 LRRC59Q96AG4 307 aaKnown RBP29.31■■■□□ 2.28
XRCC3-205ENST00000553807 SPATA31A6Q5VVP1 1343 aa29.3■■■□□ 2.28
XRCC3-205ENST00000553807 NPHP3Q7Z494 1330 aa29.3■■■□□ 2.28
XRCC3-205ENST00000553807 RGPD8O14715 1765 aaPredicted RBP29.3■■■□□ 2.28
XRCC3-205ENST00000553807 LRP6O75581 1613 aa29.3■■■□□ 2.28
XRCC3-205ENST00000553807 SOS2Q07890 1332 aaPredicted RBP29.29■■■□□ 2.28
XRCC3-205ENST00000553807 ILDR2Q71H61 639 aa29.29■■■□□ 2.28
XRCC3-205ENST00000553807 USP32Q8NFA0 1604 aa29.28■■■□□ 2.28
XRCC3-205ENST00000553807 FOXO3O43524 673 aa29.28■■■□□ 2.28
XRCC3-205ENST00000553807 XPCQ01831 940 aaPredicted RBP29.27■■■□□ 2.28
XRCC3-205ENST00000553807 PXDNQ92626 1479 aa29.27■■■□□ 2.28
XRCC3-205ENST00000553807 ANKARQ7Z5J8 1434 aa29.27■■■□□ 2.28
XRCC3-205ENST00000553807 ROCK2O75116 1388 aaKnown RBP29.26■■■□□ 2.28
XRCC3-205ENST00000553807 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.28
XRCC3-205ENST00000553807 EIF3AQ14152 1382 aaKnown RBP29.26■■■□□ 2.27
XRCC3-205ENST00000553807 TULP4Q9NRJ4 1543 aa29.25■■■□□ 2.27
XRCC3-205ENST00000553807 NUTM2BA6NNL0 878 aaPredicted RBP29.25■■■□□ 2.27
XRCC3-205ENST00000553807 NUTM2EB1AL46 878 aaPredicted RBP29.25■■■□□ 2.27
XRCC3-205ENST00000553807 NUTM2AQ8IVF1 878 aaPredicted RBP29.25■■■□□ 2.27
XRCC3-205ENST00000553807 WASLO00401 505 aaPredicted RBP29.24■■■□□ 2.27
XRCC3-205ENST00000553807 PHF8Q9UPP1 1060 aa29.24■■■□□ 2.27
XRCC3-205ENST00000553807 NBPF8Q3BBV2 869 aa29.23■■■□□ 2.27
XRCC3-205ENST00000553807 MEX3CQ5U5Q3 659 aaKnown RBP29.23■■■□□ 2.27
XRCC3-205ENST00000553807 PRR36Q9H6K5 1346 aa29.2■■■□□ 2.27
XRCC3-205ENST00000553807 CENPJQ9HC77 1338 aaPredicted RBP29.2■■■□□ 2.27
XRCC3-205ENST00000553807 QRICH2Q9H0J4 1663 aa29.2■■■□□ 2.26
XRCC3-205ENST00000553807 PMFBP1Q8TBY8 1022 aa29.17■■■□□ 2.26
XRCC3-205ENST00000553807 RGS17Q9UGC6 210 aaPredicted RBP29.17■■■□□ 2.26
XRCC3-205ENST00000553807 ATP7BP35670 1465 aa29.16■■■□□ 2.26
XRCC3-205ENST00000553807 RALGAPBQ86X10 1494 aa29.15■■■□□ 2.26
XRCC3-205ENST00000553807 COL22A1Q8NFW1 1626 aaPredicted RBP29.14■■■□□ 2.26
XRCC3-205ENST00000553807 KRT28Q7Z3Y7 464 aa29.14■■■□□ 2.26
XRCC3-205ENST00000553807 CDK19Q9BWU1 502 aa29.14■■■□□ 2.26
XRCC3-205ENST00000553807 ITSN1Q15811 1721 aa29.14■■■□□ 2.25
XRCC3-205ENST00000553807 GPRASP1Q5JY77 1395 aa29.13■■■□□ 2.25
XRCC3-205ENST00000553807 NUDT16Q96DE0 195 aaKnown RBP29.11■■■□□ 2.25
XRCC3-205ENST00000553807 PSME1Q06323 249 aa29.1■■■□□ 2.25
XRCC3-205ENST00000553807 SPATA31A3Q5VYP0 1347 aa29.09■■■□□ 2.25
XRCC3-205ENST00000553807 TNS3Q68CZ2 1445 aa29.09■■■□□ 2.25
XRCC3-205ENST00000553807 TOPAZ1Q8N9V7 1692 aa29.09■■■□□ 2.25
XRCC3-205ENST00000553807 ADAMTS2O95450 1211 aa29.08■■■□□ 2.25
XRCC3-205ENST00000553807 CARD11Q9BXL7 1154 aa29.08■■■□□ 2.25
XRCC3-205ENST00000553807 SRPK2P78362 688 aaKnown RBP29.07■■■□□ 2.24
XRCC3-205ENST00000553807 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
XRCC3-205ENST00000553807 NGDNQ8NEJ9 315 aaKnown RBP29.06■■■□□ 2.24
XRCC3-205ENST00000553807 C8orf37Q96NL8 207 aa29.06■■■□□ 2.24
XRCC3-205ENST00000553807 SBNO1A3KN83 1393 aa29.05■■■□□ 2.24
XRCC3-205ENST00000553807 POTEAQ6S8J7 498 aa29.05■■■□□ 2.24
XRCC3-205ENST00000553807 LMOD2Q6P5Q4 547 aa29.04■■■□□ 2.24
XRCC3-205ENST00000553807 TRPM3Q9HCF6 1732 aaPredicted RBP29.03■■■□□ 2.24
XRCC3-205ENST00000553807 CABP2Q9NPB3 220 aa29.03■■■□□ 2.24
XRCC3-205ENST00000553807 AFF2P51816 1311 aa29.02■■■□□ 2.24
XRCC3-205ENST00000553807 CCER1Q8TC90 406 aaPredicted RBP29.02■■■□□ 2.24
XRCC3-205ENST00000553807 PLEKHG5O94827 1062 aa29.01■■■□□ 2.23
XRCC3-205ENST00000553807 CCDC61Q9Y6R9 512 aa29.01■■■□□ 2.23
XRCC3-205ENST00000553807 ZNF772Q68DY9 489 aaPredicted RBP29■■■□□ 2.23
XRCC3-205ENST00000553807 ARHGEF10O15013 1369 aa29■■■□□ 2.23
XRCC3-205ENST00000553807 EVC2Q86UK5 1308 aa28.99■■■□□ 2.23
XRCC3-205ENST00000553807 PPIP5K1Q6PFW1 1433 aa28.98■■■□□ 2.23
XRCC3-205ENST00000553807 NGLY1Q96IV0 654 aa28.97■■■□□ 2.23
XRCC3-205ENST00000553807 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
XRCC3-205ENST00000553807 ACEP12821 1306 aa28.95■■■□□ 2.23
XRCC3-205ENST00000553807 SOCS7O14512 581 aa28.95■■■□□ 2.22
XRCC3-205ENST00000553807 PAK3O75914 559 aaPredicted RBP28.95■■■□□ 2.22
XRCC3-205ENST00000553807 HAP1P54257 671 aaPredicted RBP28.95■■■□□ 2.22
XRCC3-205ENST00000553807 POLR3AO14802 1390 aaPredicted RBP28.95■■■□□ 2.22
XRCC3-205ENST00000553807 ABCA3Q99758 1704 aa28.94■■■□□ 2.22
XRCC3-205ENST00000553807 MARF1Q9Y4F3 1742 aaKnown RBP28.94■■■□□ 2.22
XRCC3-205ENST00000553807 PLEKHG3A1L390 1219 aa28.93■■■□□ 2.22
XRCC3-205ENST00000553807 CABLES1Q8TDN4 633 aa28.93■■■□□ 2.22
XRCC3-205ENST00000553807 SBNO2Q9Y2G9 1366 aa28.92■■■□□ 2.22
XRCC3-205ENST00000553807 TIMELESSQ9UNS1 1208 aa28.9■■■□□ 2.22
XRCC3-205ENST00000553807 CABP1Q9NZU7 370 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms