RNA–Protein interactions for RNA: ENST00000553531.1

PTPN21-203, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-203ENST00000553531 DLC1Q96QB1 1528 aa17.52■□□□□ 0.39
PTPN21-203ENST00000553531 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
PTPN21-203ENST00000553531 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
PTPN21-203ENST00000553531 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
PTPN21-203ENST00000553531 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
PTPN21-203ENST00000553531 ARHGEF28Q8N1W1 1705 aaKnown RBP17.48■□□□□ 0.39
PTPN21-203ENST00000553531 KDM2AQ9Y2K7 1162 aa17.48■□□□□ 0.39
PTPN21-203ENST00000553531 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
PTPN21-203ENST00000553531 JCADQ9P266 1359 aa17.47■□□□□ 0.39
PTPN21-203ENST00000553531 ADGRB2O60241 1585 aa17.47■□□□□ 0.39
PTPN21-203ENST00000553531 LRP6O75581 1613 aa17.47■□□□□ 0.39
PTPN21-203ENST00000553531 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
PTPN21-203ENST00000553531 ORAI2Q96SN7 254 aa17.46■□□□□ 0.39
PTPN21-203ENST00000553531 USP32Q8NFA0 1604 aa17.45■□□□□ 0.38
PTPN21-203ENST00000553531 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
PTPN21-203ENST00000553531 RGS17Q9UGC6 210 aaPredicted RBP17.44■□□□□ 0.38
PTPN21-203ENST00000553531 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
PTPN21-203ENST00000553531 PRAM1Q96QH2 718 aa17.41■□□□□ 0.38
PTPN21-203ENST00000553531 KIF1AQ12756 1690 aa17.4■□□□□ 0.38
PTPN21-203ENST00000553531 PXDNQ92626 1479 aa17.4■□□□□ 0.38
PTPN21-203ENST00000553531 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
PTPN21-203ENST00000553531 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.38
PTPN21-203ENST00000553531 TRAK1Q9UPV9 953 aa17.39■□□□□ 0.37
PTPN21-203ENST00000553531 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
PTPN21-203ENST00000553531 SAFB2Q14151 953 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTPN21-203ENST00000553531 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
PTPN21-203ENST00000553531 COL22A1Q8NFW1 1626 aaPredicted RBP17.38■□□□□ 0.37
PTPN21-203ENST00000553531 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
PTPN21-203ENST00000553531 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
PTPN21-203ENST00000553531 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
PTPN21-203ENST00000553531 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
PTPN21-203ENST00000553531 ANKARQ7Z5J8 1434 aa17.34■□□□□ 0.37
PTPN21-203ENST00000553531 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
PTPN21-203ENST00000553531 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
PTPN21-203ENST00000553531 POGKQ9P215 609 aa17.33■□□□□ 0.36
PTPN21-203ENST00000553531 MINK1Q8N4C8 1332 aaPredicted RBP17.32■□□□□ 0.36
PTPN21-203ENST00000553531 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
PTPN21-203ENST00000553531 NPHP3Q7Z494 1330 aa17.31■□□□□ 0.36
PTPN21-203ENST00000553531 FOXO3O43524 673 aa17.31■□□□□ 0.36
PTPN21-203ENST00000553531 NEUROD1Q13562 356 aa17.31■□□□□ 0.36
PTPN21-203ENST00000553531 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
PTPN21-203ENST00000553531 HIRIP3Q9BW71 556 aaPredicted RBP17.31■□□□□ 0.36
PTPN21-203ENST00000553531 TOPAZ1Q8N9V7 1692 aa17.31■□□□□ 0.36
PTPN21-203ENST00000553531 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
PTPN21-203ENST00000553531 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
PTPN21-203ENST00000553531 MARF1Q9Y4F3 1742 aaKnown RBP17.3■□□□□ 0.36
PTPN21-203ENST00000553531 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
PTPN21-203ENST00000553531 ATP7BP35670 1465 aa17.29■□□□□ 0.36
PTPN21-203ENST00000553531 ITSN1Q15811 1721 aa17.28■□□□□ 0.36
PTPN21-203ENST00000553531 SOCS7O14512 581 aa17.28■□□□□ 0.36
PTPN21-203ENST00000553531 ABCA3Q99758 1704 aa17.27■□□□□ 0.36
PTPN21-203ENST00000553531 NUTM2BA6NNL0 878 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-203ENST00000553531 NUTM2EB1AL46 878 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-203ENST00000553531 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-203ENST00000553531 NBPF8Q3BBV2 869 aa17.27■□□□□ 0.36
PTPN21-203ENST00000553531 NUTM2AQ8IVF1 878 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-203ENST00000553531 PHF8Q9UPP1 1060 aa17.27■□□□□ 0.36
PTPN21-203ENST00000553531 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
PTPN21-203ENST00000553531 SPATA31A3Q5VYP0 1347 aa17.24■□□□□ 0.35
PTPN21-203ENST00000553531 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
PTPN21-203ENST00000553531 CRYBG1Q9Y4K1 1723 aa17.23■□□□□ 0.35
PTPN21-203ENST00000553531 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
PTPN21-203ENST00000553531 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
PTPN21-203ENST00000553531 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
PTPN21-203ENST00000553531 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
PTPN21-203ENST00000553531 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
PTPN21-203ENST00000553531 MEX3CQ5U5Q3 659 aaKnown RBP17.21■□□□□ 0.35
PTPN21-203ENST00000553531 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
PTPN21-203ENST00000553531 CENPJQ9HC77 1338 aaPredicted RBP17.21■□□□□ 0.34
PTPN21-203ENST00000553531 AFF2P51816 1311 aa17.2■□□□□ 0.34
PTPN21-203ENST00000553531 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
PTPN21-203ENST00000553531 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
PTPN21-203ENST00000553531 TONSLQ96HA7 1378 aa17.18■□□□□ 0.34
PTPN21-203ENST00000553531 ADAMTS2O95450 1211 aa17.18■□□□□ 0.34
PTPN21-203ENST00000553531 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
PTPN21-203ENST00000553531 C8orf37Q96NL8 207 aa17.17■□□□□ 0.34
PTPN21-203ENST00000553531 POLR3AO14802 1390 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-203ENST00000553531 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-203ENST00000553531 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.16■□□□□ 0.34
PTPN21-203ENST00000553531 PLCH1Q4KWH8 1693 aa17.14■□□□□ 0.33
PTPN21-203ENST00000553531 BCL9LQ86UU0 1499 aa17.14■□□□□ 0.33
PTPN21-203ENST00000553531 ADRA2BP18089 450 aa17.14■□□□□ 0.33
PTPN21-203ENST00000553531 PSME1Q06323 249 aa17.14■□□□□ 0.33
PTPN21-203ENST00000553531 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
PTPN21-203ENST00000553531 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
PTPN21-203ENST00000553531 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
PTPN21-203ENST00000553531 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
PTPN21-203ENST00000553531 SLIT2O94813 1529 aa17.12■□□□□ 0.33
PTPN21-203ENST00000553531 PHRF1Q9P1Y6 1649 aaKnown RBP17.12■□□□□ 0.33
PTPN21-203ENST00000553531 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
PTPN21-203ENST00000553531 CCDC61Q9Y6R9 512 aa17.12■□□□□ 0.33
PTPN21-203ENST00000553531 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-203ENST00000553531 NGLY1Q96IV0 654 aa17.11■□□□□ 0.33
PTPN21-203ENST00000553531 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
PTPN21-203ENST00000553531 ATRNO75882 1429 aa17.11■□□□□ 0.33
PTPN21-203ENST00000553531 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
PTPN21-203ENST00000553531 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
PTPN21-203ENST00000553531 AKAP12Q02952 1782 aa17.1■□□□□ 0.33
PTPN21-203ENST00000553531 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
PTPN21-203ENST00000553531 ACEP12821 1306 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms