RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 C1orf167Q5SNV9 1468 aa34.19■■■■□ 3.06
TDP1-205ENST00000553527 COL16A1Q07092 1604 aaPredicted RBP34.19■■■■□ 3.06
TDP1-205ENST00000553527 NUTM2FA1L443 756 aa34.18■■■■□ 3.06
TDP1-205ENST00000553527 ILDR2Q71H61 639 aa34.18■■■■□ 3.06
TDP1-205ENST00000553527 AHDC1Q5TGY3 1603 aaPredicted RBP34.17■■■■□ 3.06
TDP1-205ENST00000553527 ORAI2Q96SN7 254 aa34.17■■■■□ 3.06
TDP1-205ENST00000553527 TRAK1Q9UPV9 953 aa34.17■■■■□ 3.06
TDP1-205ENST00000553527 PRAM1Q96QH2 718 aa34.16■■■■□ 3.06
TDP1-205ENST00000553527 POGKQ9P215 609 aa34.15■■■■□ 3.06
TDP1-205ENST00000553527 JCADQ9P266 1359 aa34.14■■■■□ 3.06
TDP1-205ENST00000553527 SIRT1Q96EB6 747 aa34.14■■■■□ 3.06
TDP1-205ENST00000553527 ADGRB1O14514 1584 aa34.11■■■■□ 3.05
TDP1-205ENST00000553527 ESCO1Q5FWF5 840 aa34.11■■■■□ 3.05
TDP1-205ENST00000553527 CDC42BPGQ6DT37 1551 aa34.11■■■■□ 3.05
TDP1-205ENST00000553527 NHSL1Q5SYE7 1610 aa34.1■■■■□ 3.05
TDP1-205ENST00000553527 L3MBTL2Q969R5 705 aa34.07■■■■□ 3.04
TDP1-205ENST00000553527 DLC1Q96QB1 1528 aa34.04■■■■□ 3.04
TDP1-205ENST00000553527 LRRC59Q96AG4 307 aaKnown RBP34.03■■■■□ 3.04
TDP1-205ENST00000553527 FMN2Q9NZ56 1722 aa34.01■■■■□ 3.04
TDP1-205ENST00000553527 RGPD8O14715 1765 aaPredicted RBP34.01■■■■□ 3.04
TDP1-205ENST00000553527 HIRIP3Q9BW71 556 aaPredicted RBP34.01■■■■□ 3.03
TDP1-205ENST00000553527 NUTM2BA6NNL0 878 aaPredicted RBP34■■■■□ 3.03
TDP1-205ENST00000553527 NUTM2EB1AL46 878 aaPredicted RBP34■■■■□ 3.03
TDP1-205ENST00000553527 NBPF1Q3BBV0 1214 aa34■■■■□ 3.03
TDP1-205ENST00000553527 NUTM2AQ8IVF1 878 aaPredicted RBP34■■■■□ 3.03
TDP1-205ENST00000553527 MINK1Q8N4C8 1332 aaPredicted RBP34■■■■□ 3.03
TDP1-205ENST00000553527 SHPRHQ149N8 1683 aa33.99■■■■□ 3.03
TDP1-205ENST00000553527 FOXO3O43524 673 aa33.98■■■■□ 3.03
TDP1-205ENST00000553527 SPATA31A6Q5VVP1 1343 aa33.98■■■■□ 3.03
TDP1-205ENST00000553527 KIAA1210Q9ULL0 1709 aa33.96■■■■□ 3.03
TDP1-205ENST00000553527 MEX3CQ5U5Q3 659 aaKnown RBP33.96■■■■□ 3.03
TDP1-205ENST00000553527 XPCQ01831 940 aaPredicted RBP33.95■■■■□ 3.03
TDP1-205ENST00000553527 RGS17Q9UGC6 210 aaPredicted RBP33.94■■■■□ 3.02
TDP1-205ENST00000553527 ARHGEF28Q8N1W1 1705 aaKnown RBP33.93■■■■□ 3.02
TDP1-205ENST00000553527 SOS2Q07890 1332 aaPredicted RBP33.93■■■■□ 3.02
TDP1-205ENST00000553527 NPHP3Q7Z494 1330 aa33.92■■■■□ 3.02
TDP1-205ENST00000553527 LRP6O75581 1613 aa33.9■■■■□ 3.02
TDP1-205ENST00000553527 PNPLA6Q8IY17 1366 aa33.87■■■■□ 3.01
TDP1-205ENST00000553527 PHF8Q9UPP1 1060 aa33.86■■■■□ 3.01
TDP1-205ENST00000553527 WASLO00401 505 aaPredicted RBP33.84■■■■□ 3.01
TDP1-205ENST00000553527 ADGRB2O60241 1585 aa33.84■■■■□ 3.01
TDP1-205ENST00000553527 PMFBP1Q8TBY8 1022 aa33.83■■■■□ 3.01
TDP1-205ENST00000553527 KIF1AQ12756 1690 aa33.83■■■■□ 3.01
TDP1-205ENST00000553527 KRT28Q7Z3Y7 464 aa33.81■■■■□ 3
TDP1-205ENST00000553527 USP32Q8NFA0 1604 aa33.81■■■■□ 3
TDP1-205ENST00000553527 PXDNQ92626 1479 aa33.81■■■■□ 3
TDP1-205ENST00000553527 POTEAQ6S8J7 498 aa33.8■■■■□ 3
TDP1-205ENST00000553527 TONSLQ96HA7 1378 aa33.8■■■■□ 3
TDP1-205ENST00000553527 TRPM1Q7Z4N2 1603 aa33.79■■■■□ 3
TDP1-205ENST00000553527 ADAMTS2O95450 1211 aa33.78■■■■□ 3
TDP1-205ENST00000553527 PSME1Q06323 249 aa33.77■■■■□ 3
TDP1-205ENST00000553527 SOCS7O14512 581 aa33.76■■■□□ 2.99
TDP1-205ENST00000553527 NBPF8Q3BBV2 869 aa33.76■■■□□ 2.99
TDP1-205ENST00000553527 ANKARQ7Z5J8 1434 aa33.76■■■□□ 2.99
TDP1-205ENST00000553527 PRR36Q9H6K5 1346 aa33.76■■■□□ 2.99
TDP1-205ENST00000553527 CDK19Q9BWU1 502 aa33.75■■■□□ 2.99
TDP1-205ENST00000553527 ROCK2O75116 1388 aaKnown RBP33.74■■■□□ 2.99
TDP1-205ENST00000553527 EIF3AQ14152 1382 aaKnown RBP33.74■■■□□ 2.99
TDP1-205ENST00000553527 C8orf37Q96NL8 207 aa33.74■■■□□ 2.99
TDP1-205ENST00000553527 TULP4Q9NRJ4 1543 aa33.73■■■□□ 2.99
TDP1-205ENST00000553527 PLEKHG5O94827 1062 aa33.72■■■□□ 2.99
TDP1-205ENST00000553527 CENPJQ9HC77 1338 aaPredicted RBP33.72■■■□□ 2.99
TDP1-205ENST00000553527 LMOD2Q6P5Q4 547 aa33.7■■■□□ 2.99
TDP1-205ENST00000553527 NUDT16Q96DE0 195 aaKnown RBP33.7■■■□□ 2.99
TDP1-205ENST00000553527 SPATA31A3Q5VYP0 1347 aa33.69■■■□□ 2.98
TDP1-205ENST00000553527 ZNF772Q68DY9 489 aaPredicted RBP33.68■■■□□ 2.98
TDP1-205ENST00000553527 QRICH2Q9H0J4 1663 aa33.68■■■□□ 2.98
TDP1-205ENST00000553527 NGDNQ8NEJ9 315 aaKnown RBP33.67■■■□□ 2.98
TDP1-205ENST00000553527 NGLY1Q96IV0 654 aa33.67■■■□□ 2.98
TDP1-205ENST00000553527 AFF2P51816 1311 aa33.67■■■□□ 2.98
TDP1-205ENST00000553527 COL22A1Q8NFW1 1626 aaPredicted RBP33.67■■■□□ 2.98
TDP1-205ENST00000553527 SRPK2P78362 688 aaKnown RBP33.64■■■□□ 2.98
TDP1-205ENST00000553527 ITSN1Q15811 1721 aa33.63■■■□□ 2.97
TDP1-205ENST00000553527 GPRASP1Q5JY77 1395 aa33.61■■■□□ 2.97
TDP1-205ENST00000553527 CABP2Q9NPB3 220 aa33.61■■■□□ 2.97
TDP1-205ENST00000553527 ATP7BP35670 1465 aa33.61■■■□□ 2.97
TDP1-205ENST00000553527 TNS3Q68CZ2 1445 aa33.6■■■□□ 2.97
TDP1-205ENST00000553527 HAP1P54257 671 aaPredicted RBP33.59■■■□□ 2.97
TDP1-205ENST00000553527 CARD11Q9BXL7 1154 aa33.59■■■□□ 2.97
TDP1-205ENST00000553527 PAK3O75914 559 aaPredicted RBP33.58■■■□□ 2.97
TDP1-205ENST00000553527 CABLES1Q8TDN4 633 aa33.58■■■□□ 2.97
TDP1-205ENST00000553527 CCDC61Q9Y6R9 512 aa33.58■■■□□ 2.97
TDP1-205ENST00000553527 SBNO1A3KN83 1393 aa33.58■■■□□ 2.97
TDP1-205ENST00000553527 CCER1Q8TC90 406 aaPredicted RBP33.56■■■□□ 2.96
TDP1-205ENST00000553527 MARF1Q9Y4F3 1742 aaKnown RBP33.54■■■□□ 2.96
TDP1-205ENST00000553527 QTRT2Q9H974 415 aaKnown RBP33.53■■■□□ 2.96
TDP1-205ENST00000553527 TRPM3Q9HCF6 1732 aaPredicted RBP33.53■■■□□ 2.96
TDP1-205ENST00000553527 USP21Q9UK80 565 aa33.52■■■□□ 2.96
TDP1-205ENST00000553527 ACEP12821 1306 aa33.52■■■□□ 2.96
TDP1-205ENST00000553527 ARHGEF10O15013 1369 aa33.51■■■□□ 2.96
TDP1-205ENST00000553527 RXRBP28702 533 aa33.51■■■□□ 2.95
TDP1-205ENST00000553527 EVC2Q86UK5 1308 aa33.51■■■□□ 2.95
TDP1-205ENST00000553527 CLSPNQ9HAW4 1339 aa33.51■■■□□ 2.95
TDP1-205ENST00000553527 TOPAZ1Q8N9V7 1692 aa33.5■■■□□ 2.95
TDP1-205ENST00000553527 RALGAPBQ86X10 1494 aa33.5■■■□□ 2.95
TDP1-205ENST00000553527 PPIP5K1Q6PFW1 1433 aa33.47■■■□□ 2.95
TDP1-205ENST00000553527 PLEKHG3A1L390 1219 aa33.47■■■□□ 2.95
TDP1-205ENST00000553527 FNBP4Q8N3X1 1017 aaPredicted RBP33.46■■■□□ 2.95
TDP1-205ENST00000553527 ALS2Q96Q42 1657 aa33.45■■■□□ 2.95
TDP1-205ENST00000553527 CABP1Q9NZU7 370 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms