RNA–Protein interactions for RNA: ENST00000553144.1

ATP2A2-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 1 (best)

Gene ATP2A2, Length 264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-212ENST00000553144 CCDC97Q96F63 343 aaPredicted RBP6.25□□□□□ -1.41
ATP2A2-212ENST00000553144 INO80Q9ULG1 1556 aaPredicted RBP6.25□□□□□ -1.41
ATP2A2-212ENST00000553144 STRCP1A6NGW2 1772 aa6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 MED14O60244 1454 aa6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 CCNB3Q8WWL7 1395 aa6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 LTKP29376 864 aa6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 ARIH1Q9Y4X5 557 aaPredicted RBP6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 WASHC2CQ9Y4E1 1318 aa6.24□□□□□ -1.41
ATP2A2-212ENST00000553144 CHRM1P11229 460 aaPredicted RBP6.23□□□□□ -1.41
ATP2A2-212ENST00000553144 MCCP23508 829 aa6.23□□□□□ -1.41
ATP2A2-212ENST00000553144 RBM33Q96EV2 1170 aaKnown RBP6.23□□□□□ -1.41
ATP2A2-212ENST00000553144 AK7Q96M32 723 aa6.23□□□□□ -1.41
ATP2A2-212ENST00000553144 CLSPNQ9HAW4 1339 aa6.23□□□□□ -1.41
ATP2A2-212ENST00000553144 ZC3H4Q9UPT8 1303 aaKnown RBP6.23□□□□□ -1.41
ATP2A2-212ENST00000553144 PZPP20742 1482 aa6.22□□□□□ -1.41
ATP2A2-212ENST00000553144 BRD1O95696 1058 aa6.22□□□□□ -1.41
ATP2A2-212ENST00000553144 GPATCH11Q8N954 259 aa6.22□□□□□ -1.41
ATP2A2-212ENST00000553144 RTEL1-TNFRSF6BF6WH68 1400 aa6.22□□□□□ -1.41
ATP2A2-212ENST00000553144 PLEKHH2Q8IVE3 1493 aa6.22□□□□□ -1.41
ATP2A2-212ENST00000553144 MARCH6O60337 910 aa6.21□□□□□ -1.42
ATP2A2-212ENST00000553144 UGGT1Q9NYU2 1555 aa6.21□□□□□ -1.42
ATP2A2-212ENST00000553144 TESPA1A2RU30 521 aaPredicted RBP6.2□□□□□ -1.42
ATP2A2-212ENST00000553144 RBM10P98175 930 aaKnown RBP6.2□□□□□ -1.42
ATP2A2-212ENST00000553144 KCNA1Q09470 495 aa6.2□□□□□ -1.42
ATP2A2-212ENST00000553144 MYH16Q9H6N6 1097 aa6.2□□□□□ -1.42
ATP2A2-212ENST00000553144 FYCO1Q9BQS8 1478 aa6.2□□□□□ -1.42
ATP2A2-212ENST00000553144 FAM135AQ9P2D6 1515 aa6.2□□□□□ -1.42
ATP2A2-212ENST00000553144 POLR1AO95602 1720 aaPredicted RBP6.19□□□□□ -1.42
ATP2A2-212ENST00000553144 DEPDC5O75140 1603 aa6.19□□□□□ -1.42
ATP2A2-212ENST00000553144 TXNDC2Q86VQ3 553 aa6.19□□□□□ -1.42
ATP2A2-212ENST00000553144 NCOA2Q15596 1464 aa6.19□□□□□ -1.42
ATP2A2-212ENST00000553144 NLRP1Q9C000 1473 aa6.19□□□□□ -1.42
ATP2A2-212ENST00000553144 KDM5DQ9BY66 1539 aa6.19□□□□□ -1.42
ATP2A2-212ENST00000553144 MTUS2Q5JR59 1369 aa6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 TIAM1Q13009 1591 aa6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 FAM135BQ49AJ0 1406 aa6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 ADGBQ8N7X0 1667 aa6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 ANKRD62A6NC57 917 aa6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 PROSER2Q86WR7 435 aaPredicted RBP6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 DRC1Q96MC2 740 aa6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 PPME1Q9Y570 386 aa6.18□□□□□ -1.42
ATP2A2-212ENST00000553144 IQGAP1P46940 1657 aa6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 TPD52L2O43399 206 aaKnown RBP6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 SPTY2D1Q68D10 685 aaPredicted RBP6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 TMTC2Q8N394 836 aa6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 UPF1Q92900 1129 aaKnown RBP eCLIP6.17□□□□□ -1.421e-6■■■■□ 24.1
ATP2A2-212ENST00000553144 HIRIP3Q9BW71 556 aaPredicted RBP6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 CIZ1Q9ULV3 898 aaPredicted RBP6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 LAS1LQ9Y4W2 734 aaKnown RBP6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 TMEM94Q12767 1356 aa6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 ZC3H13Q5T200 1668 aaKnown RBP6.17□□□□□ -1.42
ATP2A2-212ENST00000553144 ERVK-7P63135 1459 aa6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 SEMA3EO15041 775 aa6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 FAM43BQ6ZT52 329 aaPredicted RBP6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 FNBP4Q8N3X1 1017 aaPredicted RBP6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 SIRT1Q96EB6 747 aa6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 SLC26A8Q96RN1 970 aa6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 FAM117AQ9C073 453 aa6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 SUGT1Q9Y2Z0 365 aa6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 CEP162Q5TB80 1403 aa6.16□□□□□ -1.42
ATP2A2-212ENST00000553144 XIRP1Q702N8 1843 aaKnown RBP6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 CCDC141Q6ZP82 1450 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 SCAF11Q99590 1463 aaKnown RBP6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 ARHGAP23Q9P227 1491 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 ABCC3O15438 1527 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 RNF17Q9BXT8 1623 aaKnown RBP6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 NEFMP07197 916 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 TSPY4P0CV99 314 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 TSPY10P0CW01 314 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 KCNA6P17658 529 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 PDE4DQ08499 809 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 FAM50AQ14320 339 aaKnown RBP6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 GORABQ5T7V8 394 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 ARHGEF1Q92888 912 aaKnown RBP6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 RNF25Q96BH1 459 aaPredicted RBP6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 SGSM3Q96HU1 749 aa6.15□□□□□ -1.42
ATP2A2-212ENST00000553144 CAMSAP2Q08AD1 1489 aa6.15□□□□□ -1.43
ATP2A2-212ENST00000553144 SETD1AO15047 1707 aaKnown RBP6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 RBM47A0AV96 593 aaKnown RBP6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 IDI1Q13907 227 aa6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 POLA2Q14181 598 aa6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 SREK1Q8WXA9 508 aaKnown RBP6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 SLAIN2Q9P270 581 aa6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 RBM27Q9P2N5 1060 aaKnown RBP6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 MROH1Q8NDA8 1641 aa6.14□□□□□ -1.43
ATP2A2-212ENST00000553144 PLEKHG3A1L390 1219 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 TRIM66O15016 1216 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 PPP1R15AO75807 674 aaPredicted RBP6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 PTMAP06454 111 aaKnown RBP6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 WWC1Q8IX03 1113 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 TRIM52Q96A61 297 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 SLC52A1Q9NWF4 448 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 KIAA1522Q9P206 1035 aaPredicted RBP6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 TMEM2Q9UHN6 1383 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 SLIT1O75093 1534 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 MAP3K1Q13233 1512 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 SYNMO15061 1565 aa6.13□□□□□ -1.43
ATP2A2-212ENST00000553144 UBR1Q8IWV7 1749 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms