RNA–Protein interactions for RNA: ENST00000552917.1

RFX4-212, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-212ENST00000552917 SPATA31A6Q5VVP1 1343 aa17.79■□□□□ 0.44
RFX4-212ENST00000552917 DDX17Q92841 729 aaKnown RBP17.78■□□□□ 0.44
RFX4-212ENST00000552917 LRRC59Q96AG4 307 aaKnown RBP17.78■□□□□ 0.44
RFX4-212ENST00000552917 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
RFX4-212ENST00000552917 KNDC1Q76NI1 1749 aa17.78■□□□□ 0.44
RFX4-212ENST00000552917 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
RFX4-212ENST00000552917 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
RFX4-212ENST00000552917 POGKQ9P215 609 aa17.76■□□□□ 0.43
RFX4-212ENST00000552917 RGS17Q9UGC6 210 aaPredicted RBP17.76■□□□□ 0.43
RFX4-212ENST00000552917 ADGRB1O14514 1584 aa17.75■□□□□ 0.43
RFX4-212ENST00000552917 SOCS7O14512 581 aa17.75■□□□□ 0.43
RFX4-212ENST00000552917 TRIM26Q12899 539 aaPredicted RBP17.75■□□□□ 0.43
RFX4-212ENST00000552917 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
RFX4-212ENST00000552917 NHSL1Q5SYE7 1610 aa17.74■□□□□ 0.43
RFX4-212ENST00000552917 NUTM2FA1L443 756 aa17.74■□□□□ 0.43
RFX4-212ENST00000552917 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.43
RFX4-212ENST00000552917 SOS2Q07890 1332 aaPredicted RBP17.73■□□□□ 0.43
RFX4-212ENST00000552917 DLC1Q96QB1 1528 aa17.73■□□□□ 0.43
RFX4-212ENST00000552917 NPHP3Q7Z494 1330 aa17.72■□□□□ 0.43
RFX4-212ENST00000552917 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
RFX4-212ENST00000552917 SHPRHQ149N8 1683 aa17.71■□□□□ 0.42
RFX4-212ENST00000552917 LRP6O75581 1613 aa17.7■□□□□ 0.42
RFX4-212ENST00000552917 NUTM2BA6NNL0 878 aaPredicted RBP17.7■□□□□ 0.42
RFX4-212ENST00000552917 NUTM2EB1AL46 878 aaPredicted RBP17.7■□□□□ 0.42
RFX4-212ENST00000552917 FOXO3O43524 673 aa17.7■□□□□ 0.42
RFX4-212ENST00000552917 NUTM2AQ8IVF1 878 aaPredicted RBP17.7■□□□□ 0.42
RFX4-212ENST00000552917 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
RFX4-212ENST00000552917 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
RFX4-212ENST00000552917 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
RFX4-212ENST00000552917 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
RFX4-212ENST00000552917 POTEAQ6S8J7 498 aa17.67■□□□□ 0.42
RFX4-212ENST00000552917 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
RFX4-212ENST00000552917 MINK1Q8N4C8 1332 aaPredicted RBP17.66■□□□□ 0.42
RFX4-212ENST00000552917 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
RFX4-212ENST00000552917 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
RFX4-212ENST00000552917 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
RFX4-212ENST00000552917 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
RFX4-212ENST00000552917 PXDNQ92626 1479 aa17.63■□□□□ 0.41
RFX4-212ENST00000552917 WASLO00401 505 aaPredicted RBP17.63■□□□□ 0.41
RFX4-212ENST00000552917 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
RFX4-212ENST00000552917 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
RFX4-212ENST00000552917 EIF3AQ14152 1382 aaKnown RBP17.62■□□□□ 0.41
RFX4-212ENST00000552917 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
RFX4-212ENST00000552917 KRT28Q7Z3Y7 464 aa17.61■□□□□ 0.41
RFX4-212ENST00000552917 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
RFX4-212ENST00000552917 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
RFX4-212ENST00000552917 KIF1AQ12756 1690 aa17.59■□□□□ 0.41
RFX4-212ENST00000552917 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
RFX4-212ENST00000552917 PSME1Q06323 249 aa17.59■□□□□ 0.41
RFX4-212ENST00000552917 C8orf37Q96NL8 207 aa17.59■□□□□ 0.41
RFX4-212ENST00000552917 AFF2P51816 1311 aa17.58■□□□□ 0.4
RFX4-212ENST00000552917 PRR36Q9H6K5 1346 aa17.58■□□□□ 0.4
RFX4-212ENST00000552917 PMFBP1Q8TBY8 1022 aa17.58■□□□□ 0.4
RFX4-212ENST00000552917 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
RFX4-212ENST00000552917 ARHGEF28Q8N1W1 1705 aaKnown RBP17.56■□□□□ 0.4
RFX4-212ENST00000552917 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
RFX4-212ENST00000552917 CDK19Q9BWU1 502 aa17.55■□□□□ 0.4
RFX4-212ENST00000552917 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
RFX4-212ENST00000552917 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
RFX4-212ENST00000552917 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
RFX4-212ENST00000552917 NUDT16Q96DE0 195 aaKnown RBP17.54■□□□□ 0.4
RFX4-212ENST00000552917 COL22A1Q8NFW1 1626 aaPredicted RBP17.54■□□□□ 0.4
RFX4-212ENST00000552917 RXRBP28702 533 aa17.53■□□□□ 0.4
RFX4-212ENST00000552917 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
RFX4-212ENST00000552917 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
RFX4-212ENST00000552917 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
RFX4-212ENST00000552917 RGPD8O14715 1765 aaPredicted RBP17.52■□□□□ 0.4
RFX4-212ENST00000552917 ROCK2O75116 1388 aaKnown RBP17.52■□□□□ 0.39
RFX4-212ENST00000552917 TONSLQ96HA7 1378 aa17.52■□□□□ 0.39
RFX4-212ENST00000552917 NBPF8Q3BBV2 869 aa17.51■□□□□ 0.39
RFX4-212ENST00000552917 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
RFX4-212ENST00000552917 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
RFX4-212ENST00000552917 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
RFX4-212ENST00000552917 ARHGEF10O15013 1369 aa17.51■□□□□ 0.39
RFX4-212ENST00000552917 ATP7BP35670 1465 aa17.5■□□□□ 0.39
RFX4-212ENST00000552917 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
RFX4-212ENST00000552917 USP21Q9UK80 565 aa17.49■□□□□ 0.39
RFX4-212ENST00000552917 HAP1P54257 671 aaPredicted RBP17.48■□□□□ 0.39
RFX4-212ENST00000552917 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
RFX4-212ENST00000552917 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
RFX4-212ENST00000552917 RBM6P78332 1123 aaKnown RBP17.47■□□□□ 0.39
RFX4-212ENST00000552917 CABLES1Q8TDN4 633 aa17.47■□□□□ 0.39
RFX4-212ENST00000552917 PLEKHG3A1L390 1219 aa17.46■□□□□ 0.39
RFX4-212ENST00000552917 PAK3O75914 559 aaPredicted RBP17.45■□□□□ 0.38
RFX4-212ENST00000552917 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
RFX4-212ENST00000552917 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
RFX4-212ENST00000552917 TRPC5Q9UL62 973 aaPredicted RBP17.45■□□□□ 0.38
RFX4-212ENST00000552917 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
RFX4-212ENST00000552917 ACEP12821 1306 aa17.44■□□□□ 0.38
RFX4-212ENST00000552917 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
RFX4-212ENST00000552917 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
RFX4-212ENST00000552917 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
RFX4-212ENST00000552917 BCL9LQ86UU0 1499 aa17.42■□□□□ 0.38
RFX4-212ENST00000552917 ITSN1Q15811 1721 aa17.41■□□□□ 0.38
RFX4-212ENST00000552917 ATRNO75882 1429 aa17.41■□□□□ 0.38
RFX4-212ENST00000552917 PCGF6Q9BYE7 350 aa17.41■□□□□ 0.38
RFX4-212ENST00000552917 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
RFX4-212ENST00000552917 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
RFX4-212ENST00000552917 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
RFX4-212ENST00000552917 RALGAPBQ86X10 1494 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms