RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 DDX17Q92841 729 aaKnown RBP20.53■□□□□ 0.88
DDX54-210ENST00000552375 CFAP70Q5T0N1 1121 aa20.52■□□□□ 0.88
DDX54-210ENST00000552375 WAPLQ7Z5K2 1190 aa20.52■□□□□ 0.88
DDX54-210ENST00000552375 PNPLA6Q8IY17 1366 aa20.51■□□□□ 0.87
DDX54-210ENST00000552375 POTEAQ6S8J7 498 aa20.51■□□□□ 0.87
DDX54-210ENST00000552375 LRRC59Q96AG4 307 aaKnown RBP20.51■□□□□ 0.87
DDX54-210ENST00000552375 ORAI2Q96SN7 254 aa20.51■□□□□ 0.87
DDX54-210ENST00000552375 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
DDX54-210ENST00000552375 MEX3CQ5U5Q3 659 aaKnown RBP20.5■□□□□ 0.87
DDX54-210ENST00000552375 ADGRB1O14514 1584 aa20.5■□□□□ 0.87
DDX54-210ENST00000552375 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
DDX54-210ENST00000552375 SIRT1Q96EB6 747 aa20.49■□□□□ 0.87
DDX54-210ENST00000552375 SOS2Q07890 1332 aaPredicted RBP20.49■□□□□ 0.87
DDX54-210ENST00000552375 DLC1Q96QB1 1528 aa20.48■□□□□ 0.87
DDX54-210ENST00000552375 NUTM2BA6NNL0 878 aaPredicted RBP20.45■□□□□ 0.86
DDX54-210ENST00000552375 NUTM2EB1AL46 878 aaPredicted RBP20.45■□□□□ 0.86
DDX54-210ENST00000552375 ESCO1Q5FWF5 840 aa20.45■□□□□ 0.86
DDX54-210ENST00000552375 NUTM2AQ8IVF1 878 aaPredicted RBP20.45■□□□□ 0.86
DDX54-210ENST00000552375 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
DDX54-210ENST00000552375 NPHP3Q7Z494 1330 aa20.45■□□□□ 0.86
DDX54-210ENST00000552375 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
DDX54-210ENST00000552375 FMN2Q9NZ56 1722 aa20.44■□□□□ 0.86
DDX54-210ENST00000552375 PXDNQ92626 1479 aa20.43■□□□□ 0.86
DDX54-210ENST00000552375 ZNF772Q68DY9 489 aaPredicted RBP20.43■□□□□ 0.86
DDX54-210ENST00000552375 PRAM1Q96QH2 718 aa20.42■□□□□ 0.86
DDX54-210ENST00000552375 NUTM2FA1L443 756 aa20.41■□□□□ 0.86
DDX54-210ENST00000552375 KDM2AQ9Y2K7 1162 aa20.41■□□□□ 0.86
DDX54-210ENST00000552375 ADGRB2O60241 1585 aa20.4■□□□□ 0.86
DDX54-210ENST00000552375 KIF1AQ12756 1690 aa20.38■□□□□ 0.85
DDX54-210ENST00000552375 SAFB2Q14151 953 aaKnown RBP eCLIP20.38■□□□□ 0.85
DDX54-210ENST00000552375 COL22A1Q8NFW1 1626 aaPredicted RBP20.38■□□□□ 0.85
DDX54-210ENST00000552375 AFF2P51816 1311 aa20.37■□□□□ 0.85
DDX54-210ENST00000552375 FOXO3O43524 673 aa20.37■□□□□ 0.85
DDX54-210ENST00000552375 POGKQ9P215 609 aa20.37■□□□□ 0.85
DDX54-210ENST00000552375 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
DDX54-210ENST00000552375 C8orf37Q96NL8 207 aa20.36■□□□□ 0.85
DDX54-210ENST00000552375 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
DDX54-210ENST00000552375 XPCQ01831 940 aaPredicted RBP20.35■□□□□ 0.85
DDX54-210ENST00000552375 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
DDX54-210ENST00000552375 EIF3AQ14152 1382 aaKnown RBP20.32■□□□□ 0.84
DDX54-210ENST00000552375 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
DDX54-210ENST00000552375 CDK12Q9NYV4 1490 aaPredicted RBP20.3■□□□□ 0.84
DDX54-210ENST00000552375 TULP4Q9NRJ4 1543 aa20.3■□□□□ 0.84
DDX54-210ENST00000552375 TNS3Q68CZ2 1445 aa20.29■□□□□ 0.84
DDX54-210ENST00000552375 USP32Q8NFA0 1604 aa20.29■□□□□ 0.84
DDX54-210ENST00000552375 RXRBP28702 533 aa20.29■□□□□ 0.84
DDX54-210ENST00000552375 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
DDX54-210ENST00000552375 MINK1Q8N4C8 1332 aaPredicted RBP20.28■□□□□ 0.84
DDX54-210ENST00000552375 ARHGEF28Q8N1W1 1705 aaKnown RBP20.28■□□□□ 0.84
DDX54-210ENST00000552375 SIN3AQ96ST3 1273 aa20.28■□□□□ 0.84
DDX54-210ENST00000552375 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
DDX54-210ENST00000552375 KIAA1210Q9ULL0 1709 aa20.27■□□□□ 0.84
DDX54-210ENST00000552375 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
DDX54-210ENST00000552375 SBNO1A3KN83 1393 aa20.26■□□□□ 0.83
DDX54-210ENST00000552375 KRT28Q7Z3Y7 464 aa20.26■□□□□ 0.83
DDX54-210ENST00000552375 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
DDX54-210ENST00000552375 WASLO00401 505 aaPredicted RBP20.25■□□□□ 0.83
DDX54-210ENST00000552375 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
DDX54-210ENST00000552375 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
DDX54-210ENST00000552375 FNBP4Q8N3X1 1017 aaPredicted RBP20.24■□□□□ 0.83
DDX54-210ENST00000552375 RGS12O14924 1447 aa20.24■□□□□ 0.83
DDX54-210ENST00000552375 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
DDX54-210ENST00000552375 PSME1Q06323 249 aa20.23■□□□□ 0.83
DDX54-210ENST00000552375 ATP7BP35670 1465 aa20.23■□□□□ 0.83
DDX54-210ENST00000552375 ARHGEF10O15013 1369 aa20.22■□□□□ 0.83
DDX54-210ENST00000552375 RGPD8O14715 1765 aaPredicted RBP20.22■□□□□ 0.83
DDX54-210ENST00000552375 QTRT2Q9H974 415 aaKnown RBP20.22■□□□□ 0.83
DDX54-210ENST00000552375 USP21Q9UK80 565 aa20.22■□□□□ 0.83
DDX54-210ENST00000552375 ATRNO75882 1429 aa20.21■□□□□ 0.83
DDX54-210ENST00000552375 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
DDX54-210ENST00000552375 TRPC5Q9UL62 973 aaPredicted RBP20.2■□□□□ 0.82
DDX54-210ENST00000552375 TRPM1Q7Z4N2 1603 aa20.2■□□□□ 0.82
DDX54-210ENST00000552375 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
DDX54-210ENST00000552375 GPRASP1Q5JY77 1395 aa20.19■□□□□ 0.82
DDX54-210ENST00000552375 BCL9LQ86UU0 1499 aa20.18■□□□□ 0.82
DDX54-210ENST00000552375 L3MBTL2Q969R5 705 aa20.18■□□□□ 0.82
DDX54-210ENST00000552375 SLIT2O94813 1529 aa20.17■□□□□ 0.82
DDX54-210ENST00000552375 TRPM3Q9HCF6 1732 aaPredicted RBP20.16■□□□□ 0.82
DDX54-210ENST00000552375 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
DDX54-210ENST00000552375 ABCA3Q99758 1704 aa20.14■□□□□ 0.81
DDX54-210ENST00000552375 HAP1P54257 671 aaPredicted RBP20.14■□□□□ 0.81
DDX54-210ENST00000552375 LMOD2Q6P5Q4 547 aa20.14■□□□□ 0.81
DDX54-210ENST00000552375 ITSN1Q15811 1721 aa20.13■□□□□ 0.81
DDX54-210ENST00000552375 CENPJQ9HC77 1338 aaPredicted RBP20.13■□□□□ 0.81
DDX54-210ENST00000552375 NGDNQ8NEJ9 315 aaKnown RBP20.13■□□□□ 0.81
DDX54-210ENST00000552375 NUDT16Q96DE0 195 aaKnown RBP20.13■□□□□ 0.81
DDX54-210ENST00000552375 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
DDX54-210ENST00000552375 TOPAZ1Q8N9V7 1692 aa20.13■□□□□ 0.81
DDX54-210ENST00000552375 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
DDX54-210ENST00000552375 UPF1Q92900 1129 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX54-210ENST00000552375 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
DDX54-210ENST00000552375 ALS2Q96Q42 1657 aa20.12■□□□□ 0.81
DDX54-210ENST00000552375 QRICH2Q9H0J4 1663 aa20.11■□□□□ 0.81
DDX54-210ENST00000552375 POLR3AO14802 1390 aaPredicted RBP20.1■□□□□ 0.81
DDX54-210ENST00000552375 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
DDX54-210ENST00000552375 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
DDX54-210ENST00000552375 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.81
DDX54-210ENST00000552375 RALGAPBQ86X10 1494 aa20.08■□□□□ 0.81
DDX54-210ENST00000552375 PLEKHG5O94827 1062 aa20.08■□□□□ 0.81
DDX54-210ENST00000552375 CCDC61Q9Y6R9 512 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms