RNA–Protein interactions for RNA: ENST00000550559.5

TSFM-210, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 5 BASIC

Gene TSFM, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-210ENST00000550559 DLC1Q96QB1 1528 aa23.9■■□□□ 1.42
TSFM-210ENST00000550559 TRIM26Q12899 539 aaPredicted RBP23.9■■□□□ 1.42
TSFM-210ENST00000550559 ADGRB1O14514 1584 aa23.89■■□□□ 1.41
TSFM-210ENST00000550559 PLEKHH1Q9ULM0 1364 aa23.89■■□□□ 1.41
TSFM-210ENST00000550559 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
TSFM-210ENST00000550559 SPATA31A6Q5VVP1 1343 aa23.85■■□□□ 1.41
TSFM-210ENST00000550559 ILDR2Q71H61 639 aa23.85■■□□□ 1.41
TSFM-210ENST00000550559 POGKQ9P215 609 aa23.84■■□□□ 1.41
TSFM-210ENST00000550559 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.41
TSFM-210ENST00000550559 PRAM1Q96QH2 718 aa23.83■■□□□ 1.41
TSFM-210ENST00000550559 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
TSFM-210ENST00000550559 FMN2Q9NZ56 1722 aa23.81■■□□□ 1.4
TSFM-210ENST00000550559 ESCO1Q5FWF5 840 aa23.8■■□□□ 1.4
TSFM-210ENST00000550559 KIAA1210Q9ULL0 1709 aa23.8■■□□□ 1.4
TSFM-210ENST00000550559 TRAK1Q9UPV9 953 aa23.8■■□□□ 1.4
TSFM-210ENST00000550559 NPHP3Q7Z494 1330 aa23.79■■□□□ 1.4
TSFM-210ENST00000550559 SAFB2Q14151 953 aaKnown RBP eCLIP23.78■■□□□ 1.4
TSFM-210ENST00000550559 DDX17Q92841 729 aaKnown RBP23.78■■□□□ 1.4
TSFM-210ENST00000550559 ADGRB2O60241 1585 aa23.77■■□□□ 1.4
TSFM-210ENST00000550559 NUTM2FA1L443 756 aa23.76■■□□□ 1.39
TSFM-210ENST00000550559 SOS2Q07890 1332 aaPredicted RBP23.76■■□□□ 1.39
TSFM-210ENST00000550559 MEX3CQ5U5Q3 659 aaKnown RBP23.75■■□□□ 1.39
TSFM-210ENST00000550559 KIF1AQ12756 1690 aa23.75■■□□□ 1.39
TSFM-210ENST00000550559 EIF3AQ14152 1382 aaKnown RBP23.75■■□□□ 1.39
TSFM-210ENST00000550559 PNPLA6Q8IY17 1366 aa23.74■■□□□ 1.39
TSFM-210ENST00000550559 LRP6O75581 1613 aa23.73■■□□□ 1.39
TSFM-210ENST00000550559 SIN3AQ96ST3 1273 aa23.73■■□□□ 1.39
TSFM-210ENST00000550559 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
TSFM-210ENST00000550559 L3MBTL2Q969R5 705 aa23.72■■□□□ 1.39
TSFM-210ENST00000550559 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
TSFM-210ENST00000550559 ARHGEF28Q8N1W1 1705 aaKnown RBP23.72■■□□□ 1.39
TSFM-210ENST00000550559 SOCS7O14512 581 aa23.7■■□□□ 1.38
TSFM-210ENST00000550559 MINK1Q8N4C8 1332 aaPredicted RBP23.69■■□□□ 1.38
TSFM-210ENST00000550559 NUTM2BA6NNL0 878 aaPredicted RBP23.69■■□□□ 1.38
TSFM-210ENST00000550559 NUTM2EB1AL46 878 aaPredicted RBP23.69■■□□□ 1.38
TSFM-210ENST00000550559 FOXO3O43524 673 aa23.69■■□□□ 1.38
TSFM-210ENST00000550559 NUTM2AQ8IVF1 878 aaPredicted RBP23.69■■□□□ 1.38
TSFM-210ENST00000550559 RGS17Q9UGC6 210 aaPredicted RBP23.69■■□□□ 1.38
TSFM-210ENST00000550559 PXDNQ92626 1479 aa23.68■■□□□ 1.38
TSFM-210ENST00000550559 HIRIP3Q9BW71 556 aaPredicted RBP23.67■■□□□ 1.38
TSFM-210ENST00000550559 PHF8Q9UPP1 1060 aa23.67■■□□□ 1.38
TSFM-210ENST00000550559 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
TSFM-210ENST00000550559 WASLO00401 505 aaPredicted RBP23.65■■□□□ 1.38
TSFM-210ENST00000550559 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
TSFM-210ENST00000550559 RGPD8O14715 1765 aaPredicted RBP23.63■■□□□ 1.37
TSFM-210ENST00000550559 ZNF772Q68DY9 489 aaPredicted RBP23.63■■□□□ 1.37
TSFM-210ENST00000550559 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
TSFM-210ENST00000550559 XPCQ01831 940 aaPredicted RBP23.62■■□□□ 1.37
TSFM-210ENST00000550559 USP32Q8NFA0 1604 aa23.62■■□□□ 1.37
TSFM-210ENST00000550559 PSME1Q06323 249 aa23.61■■□□□ 1.37
TSFM-210ENST00000550559 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
TSFM-210ENST00000550559 TRPM1Q7Z4N2 1603 aa23.6■■□□□ 1.37
TSFM-210ENST00000550559 POTEAQ6S8J7 498 aa23.6■■□□□ 1.37
TSFM-210ENST00000550559 KRT28Q7Z3Y7 464 aa23.6■■□□□ 1.37
TSFM-210ENST00000550559 CENPJQ9HC77 1338 aaPredicted RBP23.59■■□□□ 1.37
TSFM-210ENST00000550559 ROCK2O75116 1388 aaKnown RBP23.58■■□□□ 1.37
TSFM-210ENST00000550559 SPATA31A3Q5VYP0 1347 aa23.58■■□□□ 1.36
TSFM-210ENST00000550559 TNS3Q68CZ2 1445 aa23.57■■□□□ 1.36
TSFM-210ENST00000550559 PRR36Q9H6K5 1346 aa23.57■■□□□ 1.36
TSFM-210ENST00000550559 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
TSFM-210ENST00000550559 SBNO1A3KN83 1393 aa23.56■■□□□ 1.36
TSFM-210ENST00000550559 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
TSFM-210ENST00000550559 C8orf37Q96NL8 207 aa23.56■■□□□ 1.36
TSFM-210ENST00000550559 AFF2P51816 1311 aa23.56■■□□□ 1.36
TSFM-210ENST00000550559 ATP7BP35670 1465 aa23.56■■□□□ 1.36
TSFM-210ENST00000550559 GPRASP1Q5JY77 1395 aa23.54■■□□□ 1.36
TSFM-210ENST00000550559 ADAMTS2O95450 1211 aa23.54■■□□□ 1.36
TSFM-210ENST00000550559 ARHGEF10O15013 1369 aa23.53■■□□□ 1.36
TSFM-210ENST00000550559 CDK19Q9BWU1 502 aa23.53■■□□□ 1.36
TSFM-210ENST00000550559 NUDT16Q96DE0 195 aaKnown RBP23.52■■□□□ 1.36
TSFM-210ENST00000550559 NGLY1Q96IV0 654 aa23.52■■□□□ 1.36
TSFM-210ENST00000550559 QRICH2Q9H0J4 1663 aa23.51■■□□□ 1.35
TSFM-210ENST00000550559 NGDNQ8NEJ9 315 aaKnown RBP23.51■■□□□ 1.35
TSFM-210ENST00000550559 NBPF8Q3BBV2 869 aa23.48■■□□□ 1.35
TSFM-210ENST00000550559 LMOD2Q6P5Q4 547 aa23.48■■□□□ 1.35
TSFM-210ENST00000550559 CCDC61Q9Y6R9 512 aa23.48■■□□□ 1.35
TSFM-210ENST00000550559 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
TSFM-210ENST00000550559 HAP1P54257 671 aaPredicted RBP23.47■■□□□ 1.35
TSFM-210ENST00000550559 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
TSFM-210ENST00000550559 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
TSFM-210ENST00000550559 RXRBP28702 533 aa23.46■■□□□ 1.35
TSFM-210ENST00000550559 TRPM3Q9HCF6 1732 aaPredicted RBP23.46■■□□□ 1.35
TSFM-210ENST00000550559 MARF1Q9Y4F3 1742 aaKnown RBP23.46■■□□□ 1.35
TSFM-210ENST00000550559 EVC2Q86UK5 1308 aa23.43■■□□□ 1.34
TSFM-210ENST00000550559 FNBP4Q8N3X1 1017 aaPredicted RBP23.43■■□□□ 1.34
TSFM-210ENST00000550559 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
TSFM-210ENST00000550559 PCGF6Q9BYE7 350 aa23.43■■□□□ 1.34
TSFM-210ENST00000550559 USP21Q9UK80 565 aa23.43■■□□□ 1.34
TSFM-210ENST00000550559 CDK12Q9NYV4 1490 aaPredicted RBP23.43■■□□□ 1.34
TSFM-210ENST00000550559 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
TSFM-210ENST00000550559 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
TSFM-210ENST00000550559 PLEKHG3A1L390 1219 aa23.42■■□□□ 1.34
TSFM-210ENST00000550559 QTRT2Q9H974 415 aaKnown RBP23.42■■□□□ 1.34
TSFM-210ENST00000550559 ALS2Q96Q42 1657 aa23.41■■□□□ 1.34
TSFM-210ENST00000550559 PAK3O75914 559 aaPredicted RBP23.4■■□□□ 1.34
TSFM-210ENST00000550559 TRPC5Q9UL62 973 aaPredicted RBP23.4■■□□□ 1.34
TSFM-210ENST00000550559 PPIP5K1Q6PFW1 1433 aa23.4■■□□□ 1.34
TSFM-210ENST00000550559 ABCA3Q99758 1704 aa23.39■■□□□ 1.34
TSFM-210ENST00000550559 ACEP12821 1306 aa23.39■■□□□ 1.34
TSFM-210ENST00000550559 RBM6P78332 1123 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms