RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 SBNO2Q9Y2G9 1366 aa11.35□□□□□ -0.59
GPN3-207ENST00000550228 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
GPN3-207ENST00000550228 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
GPN3-207ENST00000550228 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
GPN3-207ENST00000550228 NKTRP30414 1462 aaKnown RBP11.33□□□□□ -0.6
GPN3-207ENST00000550228 SIRT1Q96EB6 747 aa11.33□□□□□ -0.6
GPN3-207ENST00000550228 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
GPN3-207ENST00000550228 DMRT2Q9Y5R5 561 aa11.33□□□□□ -0.6
GPN3-207ENST00000550228 ZNF335Q9H4Z2 1342 aaPredicted RBP11.33□□□□□ -0.6
GPN3-207ENST00000550228 NALCNQ8IZF0 1738 aa11.32□□□□□ -0.6
GPN3-207ENST00000550228 PROSER2Q86WR7 435 aaPredicted RBP11.32□□□□□ -0.6
GPN3-207ENST00000550228 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
GPN3-207ENST00000550228 EVC2Q86UK5 1308 aa11.32□□□□□ -0.6
GPN3-207ENST00000550228 C14orf37Q86TY3 774 aa11.31□□□□□ -0.6
GPN3-207ENST00000550228 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
GPN3-207ENST00000550228 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
GPN3-207ENST00000550228 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
GPN3-207ENST00000550228 CDCA8Q53HL2 280 aa11.3□□□□□ -0.6
GPN3-207ENST00000550228 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
GPN3-207ENST00000550228 MYOM1P52179 1685 aa11.3□□□□□ -0.6
GPN3-207ENST00000550228 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
GPN3-207ENST00000550228 XIRP1Q702N8 1843 aaKnown RBP11.28□□□□□ -0.6
GPN3-207ENST00000550228 ADGRL3Q9HAR2 1447 aa11.28□□□□□ -0.6
GPN3-207ENST00000550228 WASLO00401 505 aaPredicted RBP11.28□□□□□ -0.6
GPN3-207ENST00000550228 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
GPN3-207ENST00000550228 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.61
GPN3-207ENST00000550228 NUTM2FA1L443 756 aa11.27□□□□□ -0.61
GPN3-207ENST00000550228 CDC42BPGQ6DT37 1551 aa11.27□□□□□ -0.61
GPN3-207ENST00000550228 LRRC7Q96NW7 1537 aa11.26□□□□□ -0.61
GPN3-207ENST00000550228 TMC1Q8TDI8 760 aa11.26□□□□□ -0.61
GPN3-207ENST00000550228 ATAD2Q6PL18 1390 aa11.26□□□□□ -0.61
GPN3-207ENST00000550228 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
GPN3-207ENST00000550228 ATP7BP35670 1465 aa11.25□□□□□ -0.61
GPN3-207ENST00000550228 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
GPN3-207ENST00000550228 TOPAZ1Q8N9V7 1692 aa11.24□□□□□ -0.61
GPN3-207ENST00000550228 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
GPN3-207ENST00000550228 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
GPN3-207ENST00000550228 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
GPN3-207ENST00000550228 PRR36Q9H6K5 1346 aa11.24□□□□□ -0.61
GPN3-207ENST00000550228 PUS7Q96PZ0 661 aaKnown RBP11.23□□□□□ -0.61
GPN3-207ENST00000550228 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
GPN3-207ENST00000550228 MSH6P52701 1360 aa11.23□□□□□ -0.61
GPN3-207ENST00000550228 LTBP4Q8N2S1 1624 aa11.23□□□□□ -0.61
GPN3-207ENST00000550228 PPIP5K1Q6PFW1 1433 aa11.22□□□□□ -0.61
GPN3-207ENST00000550228 NCOA3Q9Y6Q9 1424 aa11.22□□□□□ -0.61
GPN3-207ENST00000550228 ANKARQ7Z5J8 1434 aa11.21□□□□□ -0.61
GPN3-207ENST00000550228 ATF3P18847 181 aa11.21□□□□□ -0.61
GPN3-207ENST00000550228 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.61
GPN3-207ENST00000550228 PANK3Q9H999 370 aa11.21□□□□□ -0.61
GPN3-207ENST00000550228 CABP1Q9NZU7 370 aa11.21□□□□□ -0.61
GPN3-207ENST00000550228 NINLQ9Y2I6 1382 aa11.2□□□□□ -0.62
GPN3-207ENST00000550228 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
GPN3-207ENST00000550228 DCCP43146 1447 aa11.19□□□□□ -0.62
GPN3-207ENST00000550228 AKAP12Q02952 1782 aa11.19□□□□□ -0.62
GPN3-207ENST00000550228 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
GPN3-207ENST00000550228 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 A0A1W2PP64 1363 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 ANKRD36BQ8N2N9 1353 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 HDGFL2Q7Z4V5 671 aaPredicted RBP11.18□□□□□ -0.62
GPN3-207ENST00000550228 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 TERF2IPQ9NYB0 399 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 C1orf167Q5SNV9 1468 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 CD163L1Q9NR16 1453 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 MST1RQ04912 1400 aa11.18□□□□□ -0.62
GPN3-207ENST00000550228 ESCO1Q5FWF5 840 aa11.17□□□□□ -0.62
GPN3-207ENST00000550228 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
GPN3-207ENST00000550228 MON2Q7Z3U7 1717 aa11.17□□□□□ -0.62
GPN3-207ENST00000550228 ACEP12821 1306 aa11.16□□□□□ -0.62
GPN3-207ENST00000550228 NGDNQ8NEJ9 315 aaKnown RBP11.16□□□□□ -0.62
GPN3-207ENST00000550228 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
GPN3-207ENST00000550228 KIF1AQ12756 1690 aa11.16□□□□□ -0.62
GPN3-207ENST00000550228 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
GPN3-207ENST00000550228 KIF20BQ96Q89 1820 aa11.15□□□□□ -0.62
GPN3-207ENST00000550228 PLEKHG3A1L390 1219 aa11.15□□□□□ -0.62
GPN3-207ENST00000550228 ORAI2Q96SN7 254 aa11.15□□□□□ -0.62
GPN3-207ENST00000550228 CARD14Q9BXL6 1004 aa11.15□□□□□ -0.62
GPN3-207ENST00000550228 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.62
GPN3-207ENST00000550228 ANP32CO43423 234 aa11.14□□□□□ -0.63
GPN3-207ENST00000550228 CPSF1Q10570 1443 aaKnown RBP11.14□□□□□ -0.63
GPN3-207ENST00000550228 NRKQ7Z2Y5 1582 aa11.14□□□□□ -0.63
GPN3-207ENST00000550228 PER1O15534 1290 aaPredicted RBP11.13□□□□□ -0.63
GPN3-207ENST00000550228 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
GPN3-207ENST00000550228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
GPN3-207ENST00000550228 POLR3AO14802 1390 aaPredicted RBP11.13□□□□□ -0.63
GPN3-207ENST00000550228 USP6P35125 1406 aa11.12□□□□□ -0.63
GPN3-207ENST00000550228 EDC4Q6P2E9 1401 aaKnown RBP11.12□□□□□ -0.63
GPN3-207ENST00000550228 CGNL1Q0VF96 1302 aa11.11□□□□□ -0.63
GPN3-207ENST00000550228 XPCQ01831 940 aaPredicted RBP11.11□□□□□ -0.63
GPN3-207ENST00000550228 MIER1Q8N108 512 aa11.11□□□□□ -0.63
GPN3-207ENST00000550228 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
GPN3-207ENST00000550228 SLAIN2Q9P270 581 aa11.11□□□□□ -0.63
GPN3-207ENST00000550228 ANKRD26Q9UPS8 1709 aa11.11□□□□□ -0.63
GPN3-207ENST00000550228 FOXO3O43524 673 aa11.1□□□□□ -0.63
GPN3-207ENST00000550228 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
GPN3-207ENST00000550228 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
GPN3-207ENST00000550228 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
GPN3-207ENST00000550228 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
GPN3-207ENST00000550228 PAK3O75914 559 aaPredicted RBP11.09□□□□□ -0.63
GPN3-207ENST00000550228 PSME1Q06323 249 aa11.09□□□□□ -0.63
GPN3-207ENST00000550228 BRINP3Q76B58 766 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms