RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
NR4A1-212ENST00000549102 ADGRB1O14514 1584 aa21.99■■□□□ 1.11
NR4A1-212ENST00000549102 SHPRHQ149N8 1683 aa21.99■■□□□ 1.11
NR4A1-212ENST00000549102 SIRT1Q96EB6 747 aa21.99■■□□□ 1.11
NR4A1-212ENST00000549102 DLC1Q96QB1 1528 aa21.96■■□□□ 1.11
NR4A1-212ENST00000549102 ORAI2Q96SN7 254 aa21.96■■□□□ 1.11
NR4A1-212ENST00000549102 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
NR4A1-212ENST00000549102 FMN2Q9NZ56 1722 aa21.94■■□□□ 1.1
NR4A1-212ENST00000549102 SPATA31A6Q5VVP1 1343 aa21.94■■□□□ 1.1
NR4A1-212ENST00000549102 PRAM1Q96QH2 718 aa21.93■■□□□ 1.1
NR4A1-212ENST00000549102 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
NR4A1-212ENST00000549102 LRRC59Q96AG4 307 aaKnown RBP21.91■■□□□ 1.1
NR4A1-212ENST00000549102 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
NR4A1-212ENST00000549102 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
NR4A1-212ENST00000549102 POGKQ9P215 609 aa21.9■■□□□ 1.1
NR4A1-212ENST00000549102 RGS17Q9UGC6 210 aaPredicted RBP21.9■■□□□ 1.1
NR4A1-212ENST00000549102 TRAK1Q9UPV9 953 aa21.9■■□□□ 1.1
NR4A1-212ENST00000549102 LRP6O75581 1613 aa21.9■■□□□ 1.1
NR4A1-212ENST00000549102 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.1
NR4A1-212ENST00000549102 NUTM2FA1L443 756 aa21.89■■□□□ 1.09
NR4A1-212ENST00000549102 SOS2Q07890 1332 aaPredicted RBP21.87■■□□□ 1.09
NR4A1-212ENST00000549102 ADGRB2O60241 1585 aa21.87■■□□□ 1.09
NR4A1-212ENST00000549102 SOCS7O14512 581 aa21.86■■□□□ 1.09
NR4A1-212ENST00000549102 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
NR4A1-212ENST00000549102 RGPD8O14715 1765 aaPredicted RBP21.86■■□□□ 1.09
NR4A1-212ENST00000549102 ARHGEF28Q8N1W1 1705 aaKnown RBP21.86■■□□□ 1.09
NR4A1-212ENST00000549102 PNPLA6Q8IY17 1366 aa21.86■■□□□ 1.09
NR4A1-212ENST00000549102 NPHP3Q7Z494 1330 aa21.85■■□□□ 1.09
NR4A1-212ENST00000549102 MEX3CQ5U5Q3 659 aaKnown RBP21.85■■□□□ 1.09
NR4A1-212ENST00000549102 KIF1AQ12756 1690 aa21.85■■□□□ 1.09
NR4A1-212ENST00000549102 NUTM2BA6NNL0 878 aaPredicted RBP21.83■■□□□ 1.09
NR4A1-212ENST00000549102 NUTM2EB1AL46 878 aaPredicted RBP21.83■■□□□ 1.09
NR4A1-212ENST00000549102 NUTM2AQ8IVF1 878 aaPredicted RBP21.83■■□□□ 1.09
NR4A1-212ENST00000549102 PXDNQ92626 1479 aa21.83■■□□□ 1.08
NR4A1-212ENST00000549102 FOXO3O43524 673 aa21.82■■□□□ 1.08
NR4A1-212ENST00000549102 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
NR4A1-212ENST00000549102 L3MBTL2Q969R5 705 aa21.82■■□□□ 1.08
NR4A1-212ENST00000549102 MINK1Q8N4C8 1332 aaPredicted RBP21.8■■□□□ 1.08
NR4A1-212ENST00000549102 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
NR4A1-212ENST00000549102 USP32Q8NFA0 1604 aa21.8■■□□□ 1.08
NR4A1-212ENST00000549102 XPCQ01831 940 aaPredicted RBP21.79■■□□□ 1.08
NR4A1-212ENST00000549102 POTEAQ6S8J7 498 aa21.79■■□□□ 1.08
NR4A1-212ENST00000549102 ANKARQ7Z5J8 1434 aa21.79■■□□□ 1.08
NR4A1-212ENST00000549102 NBPF1Q3BBV0 1214 aa21.78■■□□□ 1.08
NR4A1-212ENST00000549102 COL22A1Q8NFW1 1626 aaPredicted RBP21.77■■□□□ 1.08
NR4A1-212ENST00000549102 PHF8Q9UPP1 1060 aa21.77■■□□□ 1.08
NR4A1-212ENST00000549102 EIF3AQ14152 1382 aaKnown RBP21.76■■□□□ 1.07
NR4A1-212ENST00000549102 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
NR4A1-212ENST00000549102 WASLO00401 505 aaPredicted RBP21.74■■□□□ 1.07
NR4A1-212ENST00000549102 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
NR4A1-212ENST00000549102 ZNF772Q68DY9 489 aaPredicted RBP21.73■■□□□ 1.07
NR4A1-212ENST00000549102 KRT28Q7Z3Y7 464 aa21.72■■□□□ 1.07
NR4A1-212ENST00000549102 PRR36Q9H6K5 1346 aa21.71■■□□□ 1.07
NR4A1-212ENST00000549102 ADAMTS2O95450 1211 aa21.7■■□□□ 1.06
NR4A1-212ENST00000549102 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
NR4A1-212ENST00000549102 C8orf37Q96NL8 207 aa21.7■■□□□ 1.06
NR4A1-212ENST00000549102 AFF2P51816 1311 aa21.7■■□□□ 1.06
NR4A1-212ENST00000549102 ITSN1Q15811 1721 aa21.69■■□□□ 1.06
NR4A1-212ENST00000549102 SPATA31A3Q5VYP0 1347 aa21.69■■□□□ 1.06
NR4A1-212ENST00000549102 PSME1Q06323 249 aa21.68■■□□□ 1.06
NR4A1-212ENST00000549102 ATP7BP35670 1465 aa21.67■■□□□ 1.06
NR4A1-212ENST00000549102 TNS3Q68CZ2 1445 aa21.67■■□□□ 1.06
NR4A1-212ENST00000549102 MARF1Q9Y4F3 1742 aaKnown RBP21.66■■□□□ 1.06
NR4A1-212ENST00000549102 QRICH2Q9H0J4 1663 aa21.66■■□□□ 1.06
NR4A1-212ENST00000549102 SBNO1A3KN83 1393 aa21.66■■□□□ 1.06
NR4A1-212ENST00000549102 CENPJQ9HC77 1338 aaPredicted RBP21.66■■□□□ 1.06
NR4A1-212ENST00000549102 ROCK2O75116 1388 aaKnown RBP21.65■■□□□ 1.06
NR4A1-212ENST00000549102 TONSLQ96HA7 1378 aa21.65■■□□□ 1.06
NR4A1-212ENST00000549102 NGLY1Q96IV0 654 aa21.65■■□□□ 1.06
NR4A1-212ENST00000549102 CDK19Q9BWU1 502 aa21.65■■□□□ 1.06
NR4A1-212ENST00000549102 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.05
NR4A1-212ENST00000549102 TRPM3Q9HCF6 1732 aaPredicted RBP21.63■■□□□ 1.05
NR4A1-212ENST00000549102 TOPAZ1Q8N9V7 1692 aa21.63■■□□□ 1.05
NR4A1-212ENST00000549102 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
NR4A1-212ENST00000549102 NBPF8Q3BBV2 869 aa21.62■■□□□ 1.05
NR4A1-212ENST00000549102 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
NR4A1-212ENST00000549102 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
NR4A1-212ENST00000549102 LMOD2Q6P5Q4 547 aa21.6■■□□□ 1.05
NR4A1-212ENST00000549102 RXRBP28702 533 aa21.59■■□□□ 1.05
NR4A1-212ENST00000549102 ABCA3Q99758 1704 aa21.59■■□□□ 1.05
NR4A1-212ENST00000549102 ALS2Q96Q42 1657 aa21.59■■□□□ 1.05
NR4A1-212ENST00000549102 FNBP4Q8N3X1 1017 aaPredicted RBP21.57■■□□□ 1.04
NR4A1-212ENST00000549102 QTRT2Q9H974 415 aaKnown RBP21.57■■□□□ 1.04
NR4A1-212ENST00000549102 USP21Q9UK80 565 aa21.57■■□□□ 1.04
NR4A1-212ENST00000549102 CCDC61Q9Y6R9 512 aa21.57■■□□□ 1.04
NR4A1-212ENST00000549102 SRPK2P78362 688 aaKnown RBP21.56■■□□□ 1.04
NR4A1-212ENST00000549102 PLEKHG5O94827 1062 aa21.55■■□□□ 1.04
NR4A1-212ENST00000549102 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
NR4A1-212ENST00000549102 CABLES1Q8TDN4 633 aa21.55■■□□□ 1.04
NR4A1-212ENST00000549102 RALGAPBQ86X10 1494 aa21.55■■□□□ 1.04
NR4A1-212ENST00000549102 CDK12Q9NYV4 1490 aaPredicted RBP21.55■■□□□ 1.04
NR4A1-212ENST00000549102 POLR3AO14802 1390 aaPredicted RBP21.54■■□□□ 1.04
NR4A1-212ENST00000549102 CABP2Q9NPB3 220 aa21.54■■□□□ 1.04
NR4A1-212ENST00000549102 PLEKHG3A1L390 1219 aa21.53■■□□□ 1.04
NR4A1-212ENST00000549102 PAK3O75914 559 aaPredicted RBP21.53■■□□□ 1.04
NR4A1-212ENST00000549102 RBM6P78332 1123 aaKnown RBP21.53■■□□□ 1.04
NR4A1-212ENST00000549102 ACEP12821 1306 aa21.53■■□□□ 1.04
NR4A1-212ENST00000549102 CARD11Q9BXL7 1154 aa21.52■■□□□ 1.04
NR4A1-212ENST00000549102 PCGF6Q9BYE7 350 aa21.52■■□□□ 1.04
NR4A1-212ENST00000549102 TRPC5Q9UL62 973 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms