RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 IQGAP3Q86VI3 1631 aa11.93□□□□□ -0.5
RFX4-208ENST00000549040 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
RFX4-208ENST00000549040 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
RFX4-208ENST00000549040 CEBPAP49715 358 aaPredicted RBP11.92□□□□□ -0.5
RFX4-208ENST00000549040 FBXO31Q5XUX0 539 aaPredicted RBP11.92□□□□□ -0.5
RFX4-208ENST00000549040 ANKRD30BQ9BXX2 1392 aa11.92□□□□□ -0.5
RFX4-208ENST00000549040 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
RFX4-208ENST00000549040 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
RFX4-208ENST00000549040 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
RFX4-208ENST00000549040 NPATQ14207 1427 aa11.9□□□□□ -0.5
RFX4-208ENST00000549040 ADAMTSL3P82987 1691 aa11.9□□□□□ -0.5
RFX4-208ENST00000549040 PTPRTO14522 1441 aa11.89□□□□□ -0.51
RFX4-208ENST00000549040 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
RFX4-208ENST00000549040 ST18O60284 1047 aa11.88□□□□□ -0.51
RFX4-208ENST00000549040 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
RFX4-208ENST00000549040 SIN3AQ96ST3 1273 aa11.88□□□□□ -0.51
RFX4-208ENST00000549040 ESF1Q9H501 851 aaKnown RBP11.88□□□□□ -0.51
RFX4-208ENST00000549040 NOS1P29475 1434 aa11.87□□□□□ -0.51
RFX4-208ENST00000549040 EFCAB6Q5THR3 1501 aa11.87□□□□□ -0.51
RFX4-208ENST00000549040 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
RFX4-208ENST00000549040 TET3O43151 1660 aa11.87□□□□□ -0.51
RFX4-208ENST00000549040 CEP152O94986 1710 aa11.86□□□□□ -0.51
RFX4-208ENST00000549040 POTEMA6NI47 508 aa11.86□□□□□ -0.51
RFX4-208ENST00000549040 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
RFX4-208ENST00000549040 E9PCH4 1651 aa11.85□□□□□ -0.51
RFX4-208ENST00000549040 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
RFX4-208ENST00000549040 POTEGQ6S5H5 508 aa11.85□□□□□ -0.51
RFX4-208ENST00000549040 MADDQ8WXG6 1647 aa11.85□□□□□ -0.51
RFX4-208ENST00000549040 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
RFX4-208ENST00000549040 IDI1Q13907 227 aa11.84□□□□□ -0.51
RFX4-208ENST00000549040 CAMSAP1Q5T5Y3 1602 aa11.84□□□□□ -0.51
RFX4-208ENST00000549040 ZC3H13Q5T200 1668 aaKnown RBP11.84□□□□□ -0.51
RFX4-208ENST00000549040 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
RFX4-208ENST00000549040 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
RFX4-208ENST00000549040 KIF3CO14782 793 aa11.83□□□□□ -0.52
RFX4-208ENST00000549040 HOXB3P14651 431 aaPredicted RBP11.83□□□□□ -0.52
RFX4-208ENST00000549040 PTPRMP28827 1452 aa11.82□□□□□ -0.52
RFX4-208ENST00000549040 NEUROD1Q13562 356 aa11.81□□□□□ -0.52
RFX4-208ENST00000549040 DOK7Q18PE1 504 aa11.81□□□□□ -0.52
RFX4-208ENST00000549040 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
RFX4-208ENST00000549040 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
RFX4-208ENST00000549040 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
RFX4-208ENST00000549040 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
RFX4-208ENST00000549040 SYNMO15061 1565 aa11.8□□□□□ -0.52
RFX4-208ENST00000549040 SPATA31D1Q6ZQQ2 1576 aa11.8□□□□□ -0.52
RFX4-208ENST00000549040 TNRQ92752 1358 aa11.79□□□□□ -0.52
RFX4-208ENST00000549040 FER1L4A9Z1Z3 1794 aa11.79□□□□□ -0.52
RFX4-208ENST00000549040 C3P01024 1663 aa11.79□□□□□ -0.52
RFX4-208ENST00000549040 RIMS1Q86UR5 1692 aaKnown RBP11.79□□□□□ -0.52
RFX4-208ENST00000549040 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
RFX4-208ENST00000549040 TRPM2O94759 1503 aa11.78□□□□□ -0.52
RFX4-208ENST00000549040 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
RFX4-208ENST00000549040 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
RFX4-208ENST00000549040 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
RFX4-208ENST00000549040 CCDC144AA2RUR9 1427 aa11.77□□□□□ -0.53
RFX4-208ENST00000549040 SPATA31E1Q6ZUB1 1445 aa11.77□□□□□ -0.53
RFX4-208ENST00000549040 CLTCL1P53675 1640 aa11.76□□□□□ -0.53
RFX4-208ENST00000549040 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
RFX4-208ENST00000549040 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
RFX4-208ENST00000549040 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
RFX4-208ENST00000549040 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
RFX4-208ENST00000549040 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
RFX4-208ENST00000549040 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
RFX4-208ENST00000549040 SPHKAPQ2M3C7 1700 aa11.74□□□□□ -0.53
RFX4-208ENST00000549040 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
RFX4-208ENST00000549040 TIMELESSQ9UNS1 1208 aa11.73□□□□□ -0.53
RFX4-208ENST00000549040 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
RFX4-208ENST00000549040 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
RFX4-208ENST00000549040 ZSWIM6Q9HCJ5 1215 aa11.72□□□□□ -0.53
RFX4-208ENST00000549040 NLRP1Q9C000 1473 aa11.71□□□□□ -0.53
RFX4-208ENST00000549040 PPP1R15AO75807 674 aaPredicted RBP11.71□□□□□ -0.53
RFX4-208ENST00000549040 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
RFX4-208ENST00000549040 FOXK1P85037 733 aa11.71□□□□□ -0.53
RFX4-208ENST00000549040 TMEM131LA2VDJ0 1609 aa11.7□□□□□ -0.54
RFX4-208ENST00000549040 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
RFX4-208ENST00000549040 PDE4AP27815 886 aa11.69□□□□□ -0.54
RFX4-208ENST00000549040 NBPF8Q3BBV2 869 aa11.69□□□□□ -0.54
RFX4-208ENST00000549040 DCAF11Q8TEB1 546 aa11.69□□□□□ -0.54
RFX4-208ENST00000549040 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
RFX4-208ENST00000549040 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
RFX4-208ENST00000549040 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
RFX4-208ENST00000549040 LTKP29376 864 aa11.68□□□□□ -0.54
RFX4-208ENST00000549040 EMP3P54852 163 aa11.68□□□□□ -0.54
RFX4-208ENST00000549040 NUTM2DQ5VT03 806 aaPredicted RBP11.68□□□□□ -0.54
RFX4-208ENST00000549040 GPR153Q6NV75 609 aa11.68□□□□□ -0.54
RFX4-208ENST00000549040 THEMISQ8N1K5 641 aaPredicted RBP11.68□□□□□ -0.54
RFX4-208ENST00000549040 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
RFX4-208ENST00000549040 ADGRF5Q8IZF2 1346 aa11.67□□□□□ -0.54
RFX4-208ENST00000549040 SLC34A2O95436 690 aa11.67□□□□□ -0.54
RFX4-208ENST00000549040 DSG2Q14126 1118 aa11.67□□□□□ -0.54
RFX4-208ENST00000549040 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
RFX4-208ENST00000549040 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
RFX4-208ENST00000549040 ZFYVE9O95405 1425 aa11.67□□□□□ -0.54
RFX4-208ENST00000549040 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
RFX4-208ENST00000549040 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
RFX4-208ENST00000549040 TMEM2Q9UHN6 1383 aa11.67□□□□□ -0.54
RFX4-208ENST00000549040 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
RFX4-208ENST00000549040 UHRF1BP1Q6BDS2 1440 aa11.66□□□□□ -0.54
RFX4-208ENST00000549040 ARHGAP23Q9P227 1491 aa11.65□□□□□ -0.54
RFX4-208ENST00000549040 MYO3AQ8NEV4 1616 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms