RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 CARD11Q9BXL7 1154 aa17.24■□□□□ 0.35
KRT18-205ENST00000548496 FBXO41Q8TF61 875 aa17.23■□□□□ 0.35
KRT18-205ENST00000548496 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
KRT18-205ENST00000548496 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
KRT18-205ENST00000548496 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
KRT18-205ENST00000548496 ILDR1Q86SU0 546 aaPredicted RBP17.22■□□□□ 0.35
KRT18-205ENST00000548496 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
KRT18-205ENST00000548496 DLC1Q96QB1 1528 aa17.21■□□□□ 0.35
KRT18-205ENST00000548496 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
KRT18-205ENST00000548496 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.34
KRT18-205ENST00000548496 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
KRT18-205ENST00000548496 CADPS2Q86UW7 1296 aa17.19■□□□□ 0.34
KRT18-205ENST00000548496 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
KRT18-205ENST00000548496 CENPJQ9HC77 1338 aaPredicted RBP17.17■□□□□ 0.34
KRT18-205ENST00000548496 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
KRT18-205ENST00000548496 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
KRT18-205ENST00000548496 MST1RQ04912 1400 aa17.14■□□□□ 0.33
KRT18-205ENST00000548496 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
KRT18-205ENST00000548496 DDX17Q92841 729 aaKnown RBP17.14■□□□□ 0.33
KRT18-205ENST00000548496 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
KRT18-205ENST00000548496 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
KRT18-205ENST00000548496 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
KRT18-205ENST00000548496 WASLO00401 505 aaPredicted RBP17.12■□□□□ 0.33
KRT18-205ENST00000548496 HSPA1LP34931 641 aa17.12■□□□□ 0.33
KRT18-205ENST00000548496 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
KRT18-205ENST00000548496 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
KRT18-205ENST00000548496 DCCP43146 1447 aa17.12■□□□□ 0.33
KRT18-205ENST00000548496 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
KRT18-205ENST00000548496 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
KRT18-205ENST00000548496 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
KRT18-205ENST00000548496 CDC42BPGQ6DT37 1551 aa17.11■□□□□ 0.33
KRT18-205ENST00000548496 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
KRT18-205ENST00000548496 PRR36Q9H6K5 1346 aa17.09■□□□□ 0.33
KRT18-205ENST00000548496 USP47Q96K76 1375 aa17.09■□□□□ 0.33
KRT18-205ENST00000548496 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
KRT18-205ENST00000548496 PMFBP1Q8TBY8 1022 aa17.08■□□□□ 0.32
KRT18-205ENST00000548496 ADGRB2O60241 1585 aa17.07■□□□□ 0.32
KRT18-205ENST00000548496 XPCQ01831 940 aaPredicted RBP17.07■□□□□ 0.32
KRT18-205ENST00000548496 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
KRT18-205ENST00000548496 NUDT16Q96DE0 195 aaKnown RBP17.06■□□□□ 0.32
KRT18-205ENST00000548496 FOXO3O43524 673 aa17.05■□□□□ 0.32
KRT18-205ENST00000548496 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
KRT18-205ENST00000548496 TULP4Q9NRJ4 1543 aa17.05■□□□□ 0.32
KRT18-205ENST00000548496 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
KRT18-205ENST00000548496 TESK2Q96S53 571 aa17.04■□□□□ 0.32
KRT18-205ENST00000548496 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
KRT18-205ENST00000548496 PHLPP1O60346 1717 aa17.03■□□□□ 0.32
KRT18-205ENST00000548496 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
KRT18-205ENST00000548496 ATP7BP35670 1465 aa16.99■□□□□ 0.31
KRT18-205ENST00000548496 ANKARQ7Z5J8 1434 aa16.99■□□□□ 0.31
KRT18-205ENST00000548496 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
KRT18-205ENST00000548496 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
KRT18-205ENST00000548496 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
KRT18-205ENST00000548496 DISP3Q9P2K9 1392 aa16.99■□□□□ 0.31
KRT18-205ENST00000548496 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
KRT18-205ENST00000548496 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
KRT18-205ENST00000548496 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
KRT18-205ENST00000548496 PSME1Q06323 249 aa16.97■□□□□ 0.31
KRT18-205ENST00000548496 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
KRT18-205ENST00000548496 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
KRT18-205ENST00000548496 PPIP5K1Q6PFW1 1433 aa16.96■□□□□ 0.31
KRT18-205ENST00000548496 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.31
KRT18-205ENST00000548496 TMF1P82094 1093 aa16.96■□□□□ 0.31
KRT18-205ENST00000548496 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.31
KRT18-205ENST00000548496 ITSN1Q15811 1721 aa16.96■□□□□ 0.3
KRT18-205ENST00000548496 COL16A1Q07092 1604 aaPredicted RBP16.95■□□□□ 0.3
KRT18-205ENST00000548496 ACEP12821 1306 aa16.95■□□□□ 0.3
KRT18-205ENST00000548496 NPHP3Q7Z494 1330 aa16.95■□□□□ 0.3
KRT18-205ENST00000548496 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
KRT18-205ENST00000548496 TOPAZ1Q8N9V7 1692 aa16.94■□□□□ 0.3
KRT18-205ENST00000548496 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
KRT18-205ENST00000548496 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
KRT18-205ENST00000548496 SOS2Q07890 1332 aaPredicted RBP16.94■□□□□ 0.3
KRT18-205ENST00000548496 PLEKHG3A1L390 1219 aa16.93■□□□□ 0.3
KRT18-205ENST00000548496 C11orf95C9JLR9 678 aaPredicted RBP16.93■□□□□ 0.3
KRT18-205ENST00000548496 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
KRT18-205ENST00000548496 PXDNQ92626 1479 aa16.92■□□□□ 0.3
KRT18-205ENST00000548496 LRRC59Q96AG4 307 aaKnown RBP16.91■□□□□ 0.3
KRT18-205ENST00000548496 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
KRT18-205ENST00000548496 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
KRT18-205ENST00000548496 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
KRT18-205ENST00000548496 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.3
KRT18-205ENST00000548496 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
KRT18-205ENST00000548496 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
KRT18-205ENST00000548496 POLR3AO14802 1390 aaPredicted RBP16.88■□□□□ 0.29
KRT18-205ENST00000548496 JCADQ9P266 1359 aa16.88■□□□□ 0.29
KRT18-205ENST00000548496 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
KRT18-205ENST00000548496 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
KRT18-205ENST00000548496 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
KRT18-205ENST00000548496 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
KRT18-205ENST00000548496 TRPM3Q9HCF6 1732 aaPredicted RBP16.85■□□□□ 0.29
KRT18-205ENST00000548496 PUS7Q96PZ0 661 aaKnown RBP16.85■□□□□ 0.29
KRT18-205ENST00000548496 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
KRT18-205ENST00000548496 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
KRT18-205ENST00000548496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
KRT18-205ENST00000548496 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
KRT18-205ENST00000548496 SBNO1A3KN83 1393 aa16.83■□□□□ 0.28
KRT18-205ENST00000548496 TNS3Q68CZ2 1445 aa16.83■□□□□ 0.28
KRT18-205ENST00000548496 HDGFL2Q7Z4V5 671 aaPredicted RBP16.83■□□□□ 0.28
KRT18-205ENST00000548496 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms