RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 KIF7Q2M1P5 1343 aa40.11■■■■■ 4.01
BRF1-213ENST00000548421 DMRT2Q9Y5R5 561 aa40.1■■■■■ 4.01
BRF1-213ENST00000548421 TULP4Q9NRJ4 1543 aa40.05■■■■■ 4
BRF1-213ENST00000548421 NKTRP30414 1462 aaKnown RBP40.05■■■■■ 4
BRF1-213ENST00000548421 MINK1Q8N4C8 1332 aaPredicted RBP40.04■■■■■ 4
BRF1-213ENST00000548421 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.04■■■■■ 4
BRF1-213ENST00000548421 CDCA8Q53HL2 280 aa40.04■■■■■ 4
BRF1-213ENST00000548421 STRCP1A6NGW2 1772 aa40.04■■■■■ 4
BRF1-213ENST00000548421 EVC2Q86UK5 1308 aa40.02■■■■■ 4
BRF1-213ENST00000548421 ADGRB2O60241 1585 aa40.01■■■■■ 4
BRF1-213ENST00000548421 POLR3GLQ9BT43 218 aa39.98■■■■□ 3.99
BRF1-213ENST00000548421 NALCNQ8IZF0 1738 aa39.91■■■■□ 3.98
BRF1-213ENST00000548421 PUS7Q96PZ0 661 aaKnown RBP39.9■■■■□ 3.98
BRF1-213ENST00000548421 DDX10Q13206 875 aaKnown RBP39.89■■■■□ 3.98
BRF1-213ENST00000548421 MYOM1P52179 1685 aa39.87■■■■□ 3.97
BRF1-213ENST00000548421 WASLO00401 505 aaPredicted RBP39.87■■■■□ 3.97
BRF1-213ENST00000548421 PROSER2Q86WR7 435 aaPredicted RBP39.87■■■■□ 3.97
BRF1-213ENST00000548421 CDK19Q9BWU1 502 aa39.87■■■■□ 3.97
BRF1-213ENST00000548421 ZNF335Q9H4Z2 1342 aaPredicted RBP39.86■■■■□ 3.97
BRF1-213ENST00000548421 SRPK2P78362 688 aaKnown RBP39.86■■■■□ 3.97
BRF1-213ENST00000548421 CABP2Q9NPB3 220 aa39.84■■■■□ 3.97
BRF1-213ENST00000548421 ADGRL3Q9HAR2 1447 aa39.84■■■■□ 3.97
BRF1-213ENST00000548421 CDC42BPGQ6DT37 1551 aa39.82■■■■□ 3.96
BRF1-213ENST00000548421 ATAD2Q6PL18 1390 aa39.8■■■■□ 3.96
BRF1-213ENST00000548421 NCOA3Q9Y6Q9 1424 aa39.8■■■■□ 3.96
BRF1-213ENST00000548421 RBM33Q96EV2 1170 aaKnown RBP39.8■■■■□ 3.96
BRF1-213ENST00000548421 TMEM94Q12767 1356 aa39.77■■■■□ 3.96
BRF1-213ENST00000548421 FMN2Q9NZ56 1722 aa39.77■■■■□ 3.96
BRF1-213ENST00000548421 DIEXFQ68CQ4 756 aaKnown RBP39.76■■■■□ 3.96
BRF1-213ENST00000548421 XIRP1Q702N8 1843 aaKnown RBP39.76■■■■□ 3.96
BRF1-213ENST00000548421 C14orf37Q86TY3 774 aa39.75■■■■□ 3.95
BRF1-213ENST00000548421 LRRC7Q96NW7 1537 aa39.74■■■■□ 3.95
BRF1-213ENST00000548421 NINLQ9Y2I6 1382 aa39.72■■■■□ 3.95
BRF1-213ENST00000548421 ATP7BP35670 1465 aa39.71■■■■□ 3.95
BRF1-213ENST00000548421 USP32Q8NFA0 1604 aa39.69■■■■□ 3.94
BRF1-213ENST00000548421 TOPAZ1Q8N9V7 1692 aa39.68■■■■□ 3.94
BRF1-213ENST00000548421 ITSN1Q15811 1721 aa39.68■■■■□ 3.94
BRF1-213ENST00000548421 TMC1Q8TDI8 760 aa39.68■■■■□ 3.94
BRF1-213ENST00000548421 NUDT16Q96DE0 195 aaKnown RBP39.67■■■■□ 3.94
BRF1-213ENST00000548421 C19orf44Q9H6X5 657 aa39.66■■■■□ 3.94
BRF1-213ENST00000548421 ANKARQ7Z5J8 1434 aa39.65■■■■□ 3.94
BRF1-213ENST00000548421 PRR36Q9H6K5 1346 aa39.64■■■■□ 3.94
BRF1-213ENST00000548421 RGPD8O14715 1765 aaPredicted RBP39.64■■■■□ 3.94
BRF1-213ENST00000548421 DCCP43146 1447 aa39.64■■■■□ 3.94
BRF1-213ENST00000548421 SLC12A5Q9H2X9 1139 aa39.63■■■■□ 3.94
BRF1-213ENST00000548421 PANK3Q9H999 370 aa39.62■■■■□ 3.93
BRF1-213ENST00000548421 LTBP4Q8N2S1 1624 aa39.62■■■■□ 3.93
BRF1-213ENST00000548421 CCDC61Q9Y6R9 512 aa39.62■■■■□ 3.93
BRF1-213ENST00000548421 PPIP5K1Q6PFW1 1433 aa39.61■■■■□ 3.93
BRF1-213ENST00000548421 MSH6P52701 1360 aa39.6■■■■□ 3.93
BRF1-213ENST00000548421 NUTM2FA1L443 756 aa39.6■■■■□ 3.93
BRF1-213ENST00000548421 CABP1Q9NZU7 370 aa39.58■■■■□ 3.93
BRF1-213ENST00000548421 ANKRD36BQ8N2N9 1353 aa39.57■■■■□ 3.93
BRF1-213ENST00000548421 CD163L1Q9NR16 1453 aa39.53■■■■□ 3.92
BRF1-213ENST00000548421 ATF3P18847 181 aa39.53■■■■□ 3.92
BRF1-213ENST00000548421 TERF2IPQ9NYB0 399 aa39.52■■■■□ 3.92
BRF1-213ENST00000548421 A0A1W2PP64 1363 aa39.51■■■■□ 3.92
BRF1-213ENST00000548421 CADPS2Q86UW7 1296 aa39.5■■■■□ 3.91
BRF1-213ENST00000548421 AKAP12Q02952 1782 aa39.5■■■■□ 3.91
BRF1-213ENST00000548421 PER1O15534 1290 aaPredicted RBP39.49■■■■□ 3.91
BRF1-213ENST00000548421 PLEKHG3A1L390 1219 aa39.48■■■■□ 3.91
BRF1-213ENST00000548421 HDGFL2Q7Z4V5 671 aaPredicted RBP39.48■■■■□ 3.91
BRF1-213ENST00000548421 MST1RQ04912 1400 aa39.46■■■■□ 3.91
BRF1-213ENST00000548421 CPSF1Q10570 1443 aaKnown RBP39.45■■■■□ 3.91
BRF1-213ENST00000548421 MON2Q7Z3U7 1717 aa39.45■■■■□ 3.91
BRF1-213ENST00000548421 CARD14Q9BXL6 1004 aa39.44■■■■□ 3.9
BRF1-213ENST00000548421 KNSTRNQ9Y448 316 aa39.44■■■■□ 3.9
BRF1-213ENST00000548421 C1orf167Q5SNV9 1468 aa39.44■■■■□ 3.9
BRF1-213ENST00000548421 NSD3Q9BZ95 1437 aa39.43■■■■□ 3.9
BRF1-213ENST00000548421 POLR3AO14802 1390 aaPredicted RBP39.4■■■■□ 3.9
BRF1-213ENST00000548421 ACEP12821 1306 aa39.39■■■■□ 3.9
BRF1-213ENST00000548421 KIF1AQ12756 1690 aa39.39■■■■□ 3.9
BRF1-213ENST00000548421 PMFBP1Q8TBY8 1022 aa39.38■■■■□ 3.9
BRF1-213ENST00000548421 KTN1Q86UP2 1357 aaKnown RBP39.38■■■■□ 3.89
BRF1-213ENST00000548421 ANP32CO43423 234 aa39.37■■■■□ 3.89
BRF1-213ENST00000548421 ESCO1Q5FWF5 840 aa39.37■■■■□ 3.89
BRF1-213ENST00000548421 ZNF692Q9BU19 519 aaPredicted RBP39.37■■■■□ 3.89
BRF1-213ENST00000548421 PHF8Q9UPP1 1060 aa39.37■■■■□ 3.89
BRF1-213ENST00000548421 NGDNQ8NEJ9 315 aaKnown RBP39.34■■■■□ 3.89
BRF1-213ENST00000548421 ILDR1Q86SU0 546 aaPredicted RBP39.33■■■■□ 3.89
BRF1-213ENST00000548421 EDC4Q6P2E9 1401 aaKnown RBP39.33■■■■□ 3.89
BRF1-213ENST00000548421 NRKQ7Z2Y5 1582 aa39.33■■■■□ 3.89
BRF1-213ENST00000548421 NPC1L1Q9UHC9 1359 aa39.32■■■■□ 3.88
BRF1-213ENST00000548421 AMER1Q5JTC6 1135 aaPredicted RBP39.31■■■■□ 3.88
BRF1-213ENST00000548421 ORAI2Q96SN7 254 aa39.31■■■■□ 3.88
BRF1-213ENST00000548421 USP6P35125 1406 aa39.31■■■■□ 3.88
BRF1-213ENST00000548421 CGNL1Q0VF96 1302 aa39.29■■■■□ 3.88
BRF1-213ENST00000548421 KIF20BQ96Q89 1820 aa39.29■■■■□ 3.88
BRF1-213ENST00000548421 SLAIN2Q9P270 581 aa39.26■■■■□ 3.88
BRF1-213ENST00000548421 PRKRIP1Q9H875 184 aaPredicted RBP39.25■■■■□ 3.87
BRF1-213ENST00000548421 CC2D1BQ5T0F9 858 aaKnown RBP39.24■■■■□ 3.87
BRF1-213ENST00000548421 MIER1Q8N108 512 aa39.24■■■■□ 3.87
BRF1-213ENST00000548421 NSD2O96028 1365 aa39.24■■■■□ 3.87
BRF1-213ENST00000548421 CNGB1Q14028 1251 aaPredicted RBP39.24■■■■□ 3.87
BRF1-213ENST00000548421 ANKRD26Q9UPS8 1709 aa39.22■■■■□ 3.87
BRF1-213ENST00000548421 SSH2Q76I76 1423 aa39.21■■■■□ 3.87
BRF1-213ENST00000548421 IQSEC2Q5JU85 1478 aa39.21■■■■□ 3.87
BRF1-213ENST00000548421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.19■■■■□ 3.86
BRF1-213ENST00000548421 BRD4O60885 1362 aaPredicted RBP39.19■■■■□ 3.86
BRF1-213ENST00000548421 PARD3Q8TEW0 1356 aa39.19■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms