RNA–Protein interactions for RNA: ENST00000546814.1

LETMD1-204, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-204ENST00000546814 METP08581 1390 aa10.43□□□□□ -0.74
LETMD1-204ENST00000546814 SOS2Q07890 1332 aaPredicted RBP10.43□□□□□ -0.74
LETMD1-204ENST00000546814 FNBP4Q8N3X1 1017 aaPredicted RBP10.43□□□□□ -0.74
LETMD1-204ENST00000546814 QTRT2Q9H974 415 aaKnown RBP10.43□□□□□ -0.74
LETMD1-204ENST00000546814 NUP155O75694 1391 aa10.42□□□□□ -0.74
LETMD1-204ENST00000546814 FAM50AQ14320 339 aaKnown RBP10.41□□□□□ -0.74
LETMD1-204ENST00000546814 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
LETMD1-204ENST00000546814 C1orf167Q5SNV9 1468 aa10.41□□□□□ -0.74
LETMD1-204ENST00000546814 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
LETMD1-204ENST00000546814 NEXMIFQ5QGS0 1516 aa10.39□□□□□ -0.75
LETMD1-204ENST00000546814 CHGAP10645 457 aaKnown RBP10.39□□□□□ -0.75
LETMD1-204ENST00000546814 NUTM2DQ5VT03 806 aaPredicted RBP10.39□□□□□ -0.75
LETMD1-204ENST00000546814 CCDC125Q86Z20 511 aa10.39□□□□□ -0.75
LETMD1-204ENST00000546814 COL22A1Q8NFW1 1626 aaPredicted RBP10.39□□□□□ -0.75
LETMD1-204ENST00000546814 NALCNQ8IZF0 1738 aa10.38□□□□□ -0.75
LETMD1-204ENST00000546814 NUTM2BA6NNL0 878 aaPredicted RBP10.38□□□□□ -0.75
LETMD1-204ENST00000546814 NUTM2EB1AL46 878 aaPredicted RBP10.38□□□□□ -0.75
LETMD1-204ENST00000546814 NUTM2AQ8IVF1 878 aaPredicted RBP10.38□□□□□ -0.75
LETMD1-204ENST00000546814 ATRNO75882 1429 aa10.38□□□□□ -0.75
LETMD1-204ENST00000546814 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
LETMD1-204ENST00000546814 HFM1A2PYH4 1435 aa10.37□□□□□ -0.75
LETMD1-204ENST00000546814 C8orf37Q96NL8 207 aa10.37□□□□□ -0.75
LETMD1-204ENST00000546814 TRPC5Q9UL62 973 aaPredicted RBP10.37□□□□□ -0.75
LETMD1-204ENST00000546814 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
LETMD1-204ENST00000546814 MYOM2P54296 1465 aa10.36□□□□□ -0.75
LETMD1-204ENST00000546814 RPGRIP1LQ68CZ1 1315 aa10.36□□□□□ -0.75
LETMD1-204ENST00000546814 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
LETMD1-204ENST00000546814 ROBO2Q9HCK4 1378 aa10.35□□□□□ -0.75
LETMD1-204ENST00000546814 BCL9LQ86UU0 1499 aa10.35□□□□□ -0.75
LETMD1-204ENST00000546814 USP21Q9UK80 565 aa10.34□□□□□ -0.75
LETMD1-204ENST00000546814 TECPR2O15040 1411 aa10.33□□□□□ -0.76
LETMD1-204ENST00000546814 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
LETMD1-204ENST00000546814 DDX17Q92841 729 aaKnown RBP10.33□□□□□ -0.76
LETMD1-204ENST00000546814 PXDNQ92626 1479 aa10.33□□□□□ -0.76
LETMD1-204ENST00000546814 CDC42BPGQ6DT37 1551 aa10.33□□□□□ -0.76
LETMD1-204ENST00000546814 NPHP3Q7Z494 1330 aa10.33□□□□□ -0.76
LETMD1-204ENST00000546814 ORAI2Q96SN7 254 aa10.32□□□□□ -0.76
LETMD1-204ENST00000546814 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
LETMD1-204ENST00000546814 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
LETMD1-204ENST00000546814 ADAMTS2O95450 1211 aa10.31□□□□□ -0.76
LETMD1-204ENST00000546814 ZNF326Q5BKZ1 582 aaKnown RBP10.31□□□□□ -0.76
LETMD1-204ENST00000546814 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.3□□□□□ -0.76
LETMD1-204ENST00000546814 SLIT2O94813 1529 aa10.3□□□□□ -0.76
LETMD1-204ENST00000546814 LRPPRCP42704 1394 aaKnown RBP10.29□□□□□ -0.76
LETMD1-204ENST00000546814 ONECUT3O60422 494 aaPredicted RBP10.29□□□□□ -0.76
LETMD1-204ENST00000546814 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
LETMD1-204ENST00000546814 NAIPQ13075 1403 aa10.29□□□□□ -0.76
LETMD1-204ENST00000546814 KIF1BO60333 1816 aa10.28□□□□□ -0.76
LETMD1-204ENST00000546814 BLMP54132 1417 aaPredicted RBP10.28□□□□□ -0.76
LETMD1-204ENST00000546814 ABCC11Q96J66 1382 aa10.27□□□□□ -0.76
LETMD1-204ENST00000546814 RRBP1Q9P2E9 1410 aaKnown RBP10.27□□□□□ -0.77
LETMD1-204ENST00000546814 SIRT1Q96EB6 747 aa10.27□□□□□ -0.77
LETMD1-204ENST00000546814 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.77
LETMD1-204ENST00000546814 UNC5CLQ8IV45 518 aa10.26□□□□□ -0.77
LETMD1-204ENST00000546814 SPATA31A3Q5VYP0 1347 aa10.26□□□□□ -0.77
LETMD1-204ENST00000546814 RALGAPBQ86X10 1494 aa10.25□□□□□ -0.77
LETMD1-204ENST00000546814 PPLO60437 1756 aa10.25□□□□□ -0.77
LETMD1-204ENST00000546814 GLI3P10071 1580 aa10.24□□□□□ -0.77
LETMD1-204ENST00000546814 LRP5O75197 1615 aa10.24□□□□□ -0.77
LETMD1-204ENST00000546814 ANKRD30BQ9BXX2 1392 aa10.24□□□□□ -0.77
LETMD1-204ENST00000546814 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
LETMD1-204ENST00000546814 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
LETMD1-204ENST00000546814 FOXO3O43524 673 aa10.23□□□□□ -0.77
LETMD1-204ENST00000546814 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
LETMD1-204ENST00000546814 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
LETMD1-204ENST00000546814 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
LETMD1-204ENST00000546814 VPS72Q15906 364 aa10.22□□□□□ -0.77
LETMD1-204ENST00000546814 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
LETMD1-204ENST00000546814 SBNO1A3KN83 1393 aa10.21□□□□□ -0.78
LETMD1-204ENST00000546814 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
LETMD1-204ENST00000546814 USP32Q8NFA0 1604 aa10.21□□□□□ -0.78
LETMD1-204ENST00000546814 MYT1Q01538 1121 aa10.2□□□□□ -0.78
LETMD1-204ENST00000546814 NWD2Q9ULI1 1742 aa10.2□□□□□ -0.78
LETMD1-204ENST00000546814 FMN2Q9NZ56 1722 aa10.19□□□□□ -0.78
LETMD1-204ENST00000546814 NRXN1Q9ULB1 1477 aa10.19□□□□□ -0.78
LETMD1-204ENST00000546814 TNS3Q68CZ2 1445 aa10.19□□□□□ -0.78
LETMD1-204ENST00000546814 ADGRF5Q8IZF2 1346 aa10.19□□□□□ -0.78
LETMD1-204ENST00000546814 DISP2A7MBM2 1401 aa10.18□□□□□ -0.78
LETMD1-204ENST00000546814 ARHGEF10O15013 1369 aa10.18□□□□□ -0.78
LETMD1-204ENST00000546814 ITGAEP38570 1179 aa10.18□□□□□ -0.78
LETMD1-204ENST00000546814 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
LETMD1-204ENST00000546814 IFT172Q9UG01 1749 aa10.18□□□□□ -0.78
LETMD1-204ENST00000546814 YTHDC2Q9H6S0 1430 aaKnown RBP10.17□□□□□ -0.78
LETMD1-204ENST00000546814 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
LETMD1-204ENST00000546814 PSME1Q06323 249 aa10.17□□□□□ -0.78
LETMD1-204ENST00000546814 KRT28Q7Z3Y7 464 aa10.17□□□□□ -0.78
LETMD1-204ENST00000546814 WAPLQ7Z5K2 1190 aa10.17□□□□□ -0.78
LETMD1-204ENST00000546814 PLEKHH1Q9ULM0 1364 aa10.16□□□□□ -0.78
LETMD1-204ENST00000546814 KRT27Q7Z3Y8 459 aa10.16□□□□□ -0.78
LETMD1-204ENST00000546814 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
LETMD1-204ENST00000546814 C14orf93Q9H972 538 aaKnown RBP10.16□□□□□ -0.78
LETMD1-204ENST00000546814 BRWD3Q6RI45 1802 aa10.16□□□□□ -0.78
LETMD1-204ENST00000546814 ANKARQ7Z5J8 1434 aa10.16□□□□□ -0.78
LETMD1-204ENST00000546814 XPCQ01831 940 aaPredicted RBP10.15□□□□□ -0.78
LETMD1-204ENST00000546814 DEFB132Q7Z7B7 95 aa10.15□□□□□ -0.78
LETMD1-204ENST00000546814 PHF8Q9UPP1 1060 aa10.15□□□□□ -0.78
LETMD1-204ENST00000546814 DLC1Q96QB1 1528 aa10.15□□□□□ -0.78
LETMD1-204ENST00000546814 SF3B2Q13435 895 aaKnown RBP10.14□□□□□ -0.79
LETMD1-204ENST00000546814 ABCA3Q99758 1704 aa10.13□□□□□ -0.79
LETMD1-204ENST00000546814 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms