RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 SLC24A1O60721 1099 aa24.88■■□□□ 1.57
MSLN-202ENST00000545450 EXOC6Q8TAG9 804 aa24.88■■□□□ 1.57
MSLN-202ENST00000545450 SETD1AO15047 1707 aaKnown RBP24.87■■□□□ 1.57
MSLN-202ENST00000545450 RCAN3Q9UKA8 241 aa24.87■■□□□ 1.57
MSLN-202ENST00000545450 CEBPAP49715 358 aaPredicted RBP24.86■■□□□ 1.57
MSLN-202ENST00000545450 PDE3BQ13370 1112 aa24.86■■□□□ 1.57
MSLN-202ENST00000545450 PARD3Q8TEW0 1356 aa24.85■■□□□ 1.57
MSLN-202ENST00000545450 NRXN3Q9Y4C0 1643 aa24.84■■□□□ 1.57
MSLN-202ENST00000545450 PTPRMP28827 1452 aa24.83■■□□□ 1.57
MSLN-202ENST00000545450 MS4A1P11836 297 aa24.82■■□□□ 1.56
MSLN-202ENST00000545450 YTHDC2Q9H6S0 1430 aaKnown RBP24.82■■□□□ 1.56
MSLN-202ENST00000545450 NLRP13Q86W25 1043 aa24.81■■□□□ 1.56
MSLN-202ENST00000545450 STK26Q9P289 416 aa24.81■■□□□ 1.56
MSLN-202ENST00000545450 PDE4AP27815 886 aa24.81■■□□□ 1.56
MSLN-202ENST00000545450 TULP4Q9NRJ4 1543 aa24.8■■□□□ 1.56
MSLN-202ENST00000545450 CC2D1BQ5T0F9 858 aaKnown RBP24.8■■□□□ 1.56
MSLN-202ENST00000545450 NLRP1Q9C000 1473 aa24.79■■□□□ 1.56
MSLN-202ENST00000545450 BACH2Q9BYV9 841 aa24.79■■□□□ 1.56
MSLN-202ENST00000545450 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.77■■□□□ 1.56
MSLN-202ENST00000545450 TMEM2Q9UHN6 1383 aa24.76■■□□□ 1.55
MSLN-202ENST00000545450 SAFB2Q14151 953 aaKnown RBP eCLIP24.75■■□□□ 1.55
MSLN-202ENST00000545450 KNSTRNQ9Y448 316 aa24.75■■□□□ 1.55
MSLN-202ENST00000545450 AMER1Q5JTC6 1135 aaPredicted RBP24.74■■□□□ 1.55
MSLN-202ENST00000545450 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
MSLN-202ENST00000545450 INSRP06213 1382 aa24.74■■□□□ 1.55
MSLN-202ENST00000545450 NPM2Q86SE8 214 aaKnown RBP24.73■■□□□ 1.55
MSLN-202ENST00000545450 USP35Q9P2H5 1018 aa24.73■■□□□ 1.55
MSLN-202ENST00000545450 RIMS1Q86UR5 1692 aaKnown RBP24.72■■□□□ 1.55
MSLN-202ENST00000545450 PRAM1Q96QH2 718 aa24.71■■□□□ 1.55
MSLN-202ENST00000545450 EVC2Q86UK5 1308 aa24.71■■□□□ 1.55
MSLN-202ENST00000545450 SALL2Q9Y467 1007 aaPredicted RBP24.71■■□□□ 1.55
MSLN-202ENST00000545450 DLC1Q96QB1 1528 aa24.7■■□□□ 1.54
MSLN-202ENST00000545450 HDGFP51858 240 aaKnown RBP24.69■■□□□ 1.54
MSLN-202ENST00000545450 CARD14Q9BXL6 1004 aa24.69■■□□□ 1.54
MSLN-202ENST00000545450 CDCA7LQ96GN5 454 aa24.69■■□□□ 1.54
MSLN-202ENST00000545450 METP08581 1390 aa24.68■■□□□ 1.54
MSLN-202ENST00000545450 NPC1L1Q9UHC9 1359 aa24.67■■□□□ 1.54
MSLN-202ENST00000545450 PUS7Q96PZ0 661 aaKnown RBP24.67■■□□□ 1.54
MSLN-202ENST00000545450 SLC12A5Q9H2X9 1139 aa24.67■■□□□ 1.54
MSLN-202ENST00000545450 POGKQ9P215 609 aa24.67■■□□□ 1.54
MSLN-202ENST00000545450 BLMP54132 1417 aaPredicted RBP24.66■■□□□ 1.54
MSLN-202ENST00000545450 MINK1Q8N4C8 1332 aaPredicted RBP24.66■■□□□ 1.54
MSLN-202ENST00000545450 CABP2Q9NPB3 220 aa24.66■■□□□ 1.54
MSLN-202ENST00000545450 LTKP29376 864 aa24.65■■□□□ 1.54
MSLN-202ENST00000545450 KNDC1Q76NI1 1749 aa24.65■■□□□ 1.54
MSLN-202ENST00000545450 ADAMTSL3P82987 1691 aa24.65■■□□□ 1.54
MSLN-202ENST00000545450 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
MSLN-202ENST00000545450 SLIT1O75093 1534 aa24.64■■□□□ 1.54
MSLN-202ENST00000545450 NEFMP07197 916 aa24.64■■□□□ 1.53
MSLN-202ENST00000545450 ARHGAP23Q9P227 1491 aa24.63■■□□□ 1.53
MSLN-202ENST00000545450 ADAMTS13Q76LX8 1427 aa24.63■■□□□ 1.53
MSLN-202ENST00000545450 PPM1GO15355 546 aaPredicted RBP24.63■■□□□ 1.53
MSLN-202ENST00000545450 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
MSLN-202ENST00000545450 LAS1LQ9Y4W2 734 aaKnown RBP24.62■■□□□ 1.53
MSLN-202ENST00000545450 PLEKHG1Q9ULL1 1385 aa24.62■■□□□ 1.53
MSLN-202ENST00000545450 NSD3Q9BZ95 1437 aa24.61■■□□□ 1.53
MSLN-202ENST00000545450 WAPLQ7Z5K2 1190 aa24.61■■□□□ 1.53
MSLN-202ENST00000545450 PLIN1O60240 522 aa24.6■■□□□ 1.53
MSLN-202ENST00000545450 TXNDC2Q86VQ3 553 aa24.59■■□□□ 1.53
MSLN-202ENST00000545450 USP32Q8NFA0 1604 aa24.59■■□□□ 1.53
MSLN-202ENST00000545450 PPP2R1AP30153 589 aa24.59■■□□□ 1.53
MSLN-202ENST00000545450 SRPK2P78362 688 aaKnown RBP24.59■■□□□ 1.53
MSLN-202ENST00000545450 CRBNQ96SW2 442 aa24.59■■□□□ 1.53
MSLN-202ENST00000545450 CPS1P31327 1500 aa24.58■■□□□ 1.53
MSLN-202ENST00000545450 CEP170BQ9Y4F5 1589 aaPredicted RBP24.58■■□□□ 1.52
MSLN-202ENST00000545450 TECPR2O15040 1411 aa24.57■■□□□ 1.52
MSLN-202ENST00000545450 DDRGK1Q96HY6 314 aa24.57■■□□□ 1.52
MSLN-202ENST00000545450 ANKRD36BQ8N2N9 1353 aa24.56■■□□□ 1.52
MSLN-202ENST00000545450 MED14O60244 1454 aa24.56■■□□□ 1.52
MSLN-202ENST00000545450 EID1Q9Y6B2 187 aa24.55■■□□□ 1.52
MSLN-202ENST00000545450 ATAD2Q6PL18 1390 aa24.55■■□□□ 1.52
MSLN-202ENST00000545450 THEMISQ8N1K5 641 aaPredicted RBP24.54■■□□□ 1.52
MSLN-202ENST00000545450 CDK19Q9BWU1 502 aa24.54■■□□□ 1.52
MSLN-202ENST00000545450 NINLQ9Y2I6 1382 aa24.54■■□□□ 1.52
MSLN-202ENST00000545450 FAM135BQ49AJ0 1406 aa24.53■■□□□ 1.52
MSLN-202ENST00000545450 IL27Q8NEV9 243 aa24.52■■□□□ 1.52
MSLN-202ENST00000545450 ZNF142P52746 1687 aaPredicted RBP24.51■■□□□ 1.51
MSLN-202ENST00000545450 A0A1W2PP64 1363 aa24.51■■□□□ 1.51
MSLN-202ENST00000545450 KDM2BQ8NHM5 1336 aa24.51■■□□□ 1.51
MSLN-202ENST00000545450 CD163L1Q9NR16 1453 aa24.51■■□□□ 1.51
MSLN-202ENST00000545450 SLC26A8Q96RN1 970 aa24.5■■□□□ 1.51
MSLN-202ENST00000545450 SKAP1Q86WV1 359 aa24.49■■□□□ 1.51
MSLN-202ENST00000545450 SIRT1Q96EB6 747 aa24.49■■□□□ 1.51
MSLN-202ENST00000545450 ROBO2Q9HCK4 1378 aa24.48■■□□□ 1.51
MSLN-202ENST00000545450 PTPRUQ92729 1446 aa24.48■■□□□ 1.51
MSLN-202ENST00000545450 SETD1BQ9UPS6 1966 aaKnown RBP24.48■■□□□ 1.51
MSLN-202ENST00000545450 CGNL1Q0VF96 1302 aa24.46■■□□□ 1.51
MSLN-202ENST00000545450 C20orf194Q5TEA3 1177 aa24.46■■□□□ 1.51
MSLN-202ENST00000545450 DIP2AQ14689 1571 aa24.45■■□□□ 1.51
MSLN-202ENST00000545450 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.45■■□□□ 1.5
MSLN-202ENST00000545450 CENPQQ7L2Z9 268 aaPredicted RBP24.44■■□□□ 1.5
MSLN-202ENST00000545450 ADAMTS8Q9UP79 889 aa24.44■■□□□ 1.5
MSLN-202ENST00000545450 WASLO00401 505 aaPredicted RBP24.43■■□□□ 1.5
MSLN-202ENST00000545450 MORC1Q86VD1 984 aa24.42■■□□□ 1.5
MSLN-202ENST00000545450 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
MSLN-202ENST00000545450 TBX22Q9Y458 520 aa24.42■■□□□ 1.5
MSLN-202ENST00000545450 TERF2IPQ9NYB0 399 aa24.41■■□□□ 1.5
MSLN-202ENST00000545450 NSD2O96028 1365 aa24.41■■□□□ 1.5
MSLN-202ENST00000545450 ADGRB2O60241 1585 aa24.41■■□□□ 1.5
MSLN-202ENST00000545450 DUSP27Q5VZP5 1158 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms