RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 PCDHB15Q9Y5E8 787 aa10.92□□□□□ -0.66
CCDC7-210ENST00000545067 PLCH2O75038 1416 aa10.92□□□□□ -0.66
CCDC7-210ENST00000545067 FAM69CQ0P6D2 419 aa10.92□□□□□ -0.66
CCDC7-210ENST00000545067 NOL8Q76FK4 1167 aaKnown RBP10.92□□□□□ -0.66
CCDC7-210ENST00000545067 ABCC10Q5T3U5 1492 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 SEC24BO95487 1268 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
CCDC7-210ENST00000545067 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
CCDC7-210ENST00000545067 TRIM44Q96DX7 344 aaPredicted RBP10.91□□□□□ -0.66
CCDC7-210ENST00000545067 ARHGEF12Q9NZN5 1544 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 TXNDC2Q86VQ3 553 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 CDK19Q9BWU1 502 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 C22orf23Q9BZE7 217 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 ADGRL1O94910 1474 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
CCDC7-210ENST00000545067 SSH1Q8WYL5 1049 aa10.91□□□□□ -0.66
CCDC7-210ENST00000545067 KDM5CP41229 1560 aa10.9□□□□□ -0.66
CCDC7-210ENST00000545067 NKTRP30414 1462 aaKnown RBP10.9□□□□□ -0.66
CCDC7-210ENST00000545067 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
CCDC7-210ENST00000545067 NGEFQ8N5V2 710 aa10.9□□□□□ -0.66
CCDC7-210ENST00000545067 FANCAO15360 1455 aa10.9□□□□□ -0.66
CCDC7-210ENST00000545067 SHANK2Q9UPX8 1470 aa10.9□□□□□ -0.66
CCDC7-210ENST00000545067 TMPOP42166 694 aaKnown RBP10.9□□□□□ -0.67
CCDC7-210ENST00000545067 RRS1Q15050 365 aaKnown RBP10.9□□□□□ -0.67
CCDC7-210ENST00000545067 RTF1Q92541 710 aaKnown RBP10.89□□□□□ -0.67
CCDC7-210ENST00000545067 COG3Q96JB2 828 aa10.89□□□□□ -0.67
CCDC7-210ENST00000545067 NAP1L5Q96NT1 182 aaPredicted RBP10.89□□□□□ -0.67
CCDC7-210ENST00000545067 GOLGA6L22H0YM25 854 aa10.89□□□□□ -0.67
CCDC7-210ENST00000545067 MVPQ14764 893 aaKnown RBP10.89□□□□□ -0.67
CCDC7-210ENST00000545067 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
CCDC7-210ENST00000545067 DCTN1Q14203 1278 aa10.89□□□□□ -0.67
CCDC7-210ENST00000545067 TMEM57Q8N5G2 664 aa10.89□□□□□ -0.67
CCDC7-210ENST00000545067 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
CCDC7-210ENST00000545067 NUTM2GQ5VZR2 741 aa10.88□□□□□ -0.67
CCDC7-210ENST00000545067 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
CCDC7-210ENST00000545067 ATF7IPQ6VMQ6 1270 aa10.88□□□□□ -0.67
CCDC7-210ENST00000545067 WDR63Q8IWG1 891 aa10.88□□□□□ -0.67
CCDC7-210ENST00000545067 MAGI2Q86UL8 1455 aa10.88□□□□□ -0.67
CCDC7-210ENST00000545067 FOXD4L6Q3SYB3 417 aaPredicted RBP10.87□□□□□ -0.67
CCDC7-210ENST00000545067 FOXD4L3Q6VB84 417 aaPredicted RBP10.87□□□□□ -0.67
CCDC7-210ENST00000545067 C14orf93Q9H972 538 aaKnown RBP10.87□□□□□ -0.67
CCDC7-210ENST00000545067 NGDNQ8NEJ9 315 aaKnown RBP10.87□□□□□ -0.67
CCDC7-210ENST00000545067 GOLGA6L3A6NEY3 463 aa10.87□□□□□ -0.67
CCDC7-210ENST00000545067 DUOX2Q9NRD8 1548 aa10.86□□□□□ -0.67
CCDC7-210ENST00000545067 TRIM27P14373 513 aa10.86□□□□□ -0.67
CCDC7-210ENST00000545067 CASC1Q6TDU7 716 aa10.86□□□□□ -0.67
CCDC7-210ENST00000545067 CALD1Q05682 793 aaKnown RBP10.86□□□□□ -0.67
CCDC7-210ENST00000545067 CHMP4BQ9H444 224 aaKnown RBP10.86□□□□□ -0.67
CCDC7-210ENST00000545067 EMILIN1Q9Y6C2 1016 aa10.86□□□□□ -0.67
CCDC7-210ENST00000545067 ASXL1Q8IXJ9 1541 aa10.85□□□□□ -0.67
CCDC7-210ENST00000545067 GPRASP1Q5JY77 1395 aa10.85□□□□□ -0.67
CCDC7-210ENST00000545067 AMPHP49418 695 aa10.85□□□□□ -0.67
CCDC7-210ENST00000545067 L1TD1Q5T7N2 865 aaKnown RBP10.84□□□□□ -0.67
CCDC7-210ENST00000545067 CD109Q6YHK3 1445 aa10.84□□□□□ -0.67
CCDC7-210ENST00000545067 KIF16BQ96L93 1317 aa10.84□□□□□ -0.67
CCDC7-210ENST00000545067 TRIM6-TRIM34B2RNG4 842 aa10.84□□□□□ -0.67
CCDC7-210ENST00000545067 NME9Q86XW9 330 aa10.84□□□□□ -0.67
CCDC7-210ENST00000545067 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
CCDC7-210ENST00000545067 SAMD9LQ8IVG5 1584 aa10.83□□□□□ -0.68
CCDC7-210ENST00000545067 OS9Q13438 667 aaPredicted RBP10.83□□□□□ -0.68
CCDC7-210ENST00000545067 MIS18AQ9NYP9 233 aa10.83□□□□□ -0.68
CCDC7-210ENST00000545067 TWISTNBQ3B726 338 aaPredicted RBP10.83□□□□□ -0.68
CCDC7-210ENST00000545067 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
CCDC7-210ENST00000545067 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
CCDC7-210ENST00000545067 ADGBQ8N7X0 1667 aa10.83□□□□□ -0.68
CCDC7-210ENST00000545067 FAM83GA6ND36 823 aa10.82□□□□□ -0.68
CCDC7-210ENST00000545067 ABCA8O94911 1581 aa10.82□□□□□ -0.68
CCDC7-210ENST00000545067 SULT6B1Q6IMI4 303 aa10.82□□□□□ -0.68
CCDC7-210ENST00000545067 FYB1O15117 783 aa10.82□□□□□ -0.68
CCDC7-210ENST00000545067 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
CCDC7-210ENST00000545067 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
CCDC7-210ENST00000545067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC7-210ENST00000545067 TBC1D2Q9BYX2 928 aa10.82□□□□□ -0.68
CCDC7-210ENST00000545067 GNAI1P63096 354 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 GBP4Q96PP9 640 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 CHMP5Q9NZZ3 219 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 SLC26A8Q96RN1 970 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 RILPL2Q969X0 211 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 STK31Q9BXU1 1019 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
CCDC7-210ENST00000545067 UGGT1Q9NYU2 1555 aa10.8□□□□□ -0.68
CCDC7-210ENST00000545067 LMOD3Q0VAK6 560 aa10.8□□□□□ -0.68
CCDC7-210ENST00000545067 BLMP54132 1417 aaPredicted RBP10.8□□□□□ -0.68
CCDC7-210ENST00000545067 ERCC6L2Q5T890 1561 aa10.8□□□□□ -0.68
CCDC7-210ENST00000545067 CDC42BPAQ5VT25 1732 aa10.79□□□□□ -0.68
CCDC7-210ENST00000545067 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
CCDC7-210ENST00000545067 ASXL2Q76L83 1435 aa10.79□□□□□ -0.68
CCDC7-210ENST00000545067 EIF2S2P20042 333 aaKnown RBP10.79□□□□□ -0.68
CCDC7-210ENST00000545067 MCM10Q7L590 875 aa10.79□□□□□ -0.68
CCDC7-210ENST00000545067 CHD1LQ86WJ1 897 aa10.79□□□□□ -0.68
CCDC7-210ENST00000545067 RPGRIP1LQ68CZ1 1315 aa10.78□□□□□ -0.68
CCDC7-210ENST00000545067 KDM5DQ9BY66 1539 aa10.78□□□□□ -0.68
CCDC7-210ENST00000545067 TRAK2O60296 914 aa10.78□□□□□ -0.68
CCDC7-210ENST00000545067 DDX49Q9Y6V7 483 aaKnown RBP10.78□□□□□ -0.68
CCDC7-210ENST00000545067 WDR7Q9Y4E6 1490 aa10.78□□□□□ -0.68
CCDC7-210ENST00000545067 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
CCDC7-210ENST00000545067 API5Q9BZZ5 524 aaKnown RBP10.78□□□□□ -0.68
CCDC7-210ENST00000545067 ZMYM4Q5VZL5 1548 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms