RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZNF518AQ6AHZ1 1483 aa7.26□□□□□ -1.25
VPS50-220ENST00000544910 ASXL2Q76L83 1435 aa7.26□□□□□ -1.25
VPS50-220ENST00000544910 SHROOM2Q13796 1616 aa7.26□□□□□ -1.25
VPS50-220ENST00000544910 PLXNC1O60486 1568 aa7.26□□□□□ -1.25
VPS50-220ENST00000544910 PTMSP20962 102 aa7.26□□□□□ -1.25
VPS50-220ENST00000544910 ZMYM4Q5VZL5 1548 aa7.26□□□□□ -1.25
VPS50-220ENST00000544910 KDM5AP29375 1690 aaKnown RBP7.25□□□□□ -1.25
VPS50-220ENST00000544910 IQGAP3Q86VI3 1631 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 GPRASP1Q5JY77 1395 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 KIF16BQ96L93 1317 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 FAM69CQ0P6D2 419 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 EID1Q9Y6B2 187 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 UNC13BO14795 1591 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 PTMAP06454 111 aaKnown RBP7.25□□□□□ -1.25
VPS50-220ENST00000544910 TESK2Q96S53 571 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 CYB5RLQ6IPT4 315 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 PRAM1Q96QH2 718 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 SLC52A1Q9NWF4 448 aa7.25□□□□□ -1.25
VPS50-220ENST00000544910 ATAD2Q6PL18 1390 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 BLMP54132 1417 aaPredicted RBP7.24□□□□□ -1.25
VPS50-220ENST00000544910 PAK3O75914 559 aaPredicted RBP7.24□□□□□ -1.25
VPS50-220ENST00000544910 DNTTIP2Q5QJE6 756 aaKnown RBP7.24□□□□□ -1.25
VPS50-220ENST00000544910 PRDM15P57071 1507 aaPredicted RBP7.24□□□□□ -1.25
VPS50-220ENST00000544910 UHRF1BP1LA0JNW5 1464 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 NSD2O96028 1365 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 TRPM1Q7Z4N2 1603 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 ABCC1P33527 1531 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 CFAP74Q9C0B2 1584 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 PLEKHG5O94827 1062 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 MCCP23508 829 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 WWC1Q8IX03 1113 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 PIK3C2GO75747 1445 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 BCORL1Q5H9F3 1711 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 INSRP06213 1382 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 GBP4Q96PP9 640 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 RSPH6AQ9H0K4 717 aa7.24□□□□□ -1.25
VPS50-220ENST00000544910 CT47B1P0C2W7 299 aaPredicted RBP7.23□□□□□ -1.25
VPS50-220ENST00000544910 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
VPS50-220ENST00000544910 GSE1Q14687 1217 aa7.23□□□□□ -1.25
VPS50-220ENST00000544910 TRPM2O94759 1503 aa7.23□□□□□ -1.25
VPS50-220ENST00000544910 RAPGEF3O95398 923 aa7.23□□□□□ -1.25
VPS50-220ENST00000544910 C20orf194Q5TEA3 1177 aa7.23□□□□□ -1.25
VPS50-220ENST00000544910 CDK19Q9BWU1 502 aa7.23□□□□□ -1.25
VPS50-220ENST00000544910 SYNMO15061 1565 aa7.23□□□□□ -1.25
VPS50-220ENST00000544910 C14orf93Q9H972 538 aaKnown RBP7.23□□□□□ -1.25
VPS50-220ENST00000544910 GNAI1P63096 354 aa7.22□□□□□ -1.25
VPS50-220ENST00000544910 AMER1Q5JTC6 1135 aaPredicted RBP7.22□□□□□ -1.25
VPS50-220ENST00000544910 CDC42BPBQ9Y5S2 1711 aa7.22□□□□□ -1.25
VPS50-220ENST00000544910 HMMRO75330 724 aa7.22□□□□□ -1.25
VPS50-220ENST00000544910 OS9Q13438 667 aaPredicted RBP7.22□□□□□ -1.25
VPS50-220ENST00000544910 APBB1O00213 710 aa7.22□□□□□ -1.25
VPS50-220ENST00000544910 ANKRD45Q5TZF3 282 aa7.22□□□□□ -1.25
VPS50-220ENST00000544910 STK31Q9BXU1 1019 aa7.22□□□□□ -1.25
VPS50-220ENST00000544910 EXOSC9Q06265 439 aaKnown RBP7.22□□□□□ -1.25
VPS50-220ENST00000544910 PER1O15534 1290 aaPredicted RBP7.21□□□□□ -1.25
VPS50-220ENST00000544910 NGDNQ8NEJ9 315 aaKnown RBP7.21□□□□□ -1.26
VPS50-220ENST00000544910 HMOX1P09601 288 aa7.21□□□□□ -1.26
VPS50-220ENST00000544910 MSNP26038 577 aaKnown RBP7.21□□□□□ -1.26
VPS50-220ENST00000544910 AMPHP49418 695 aa7.21□□□□□ -1.26
VPS50-220ENST00000544910 API5Q9BZZ5 524 aaKnown RBP7.21□□□□□ -1.26
VPS50-220ENST00000544910 PDZRN3Q9UPQ7 1066 aa7.21□□□□□ -1.26
VPS50-220ENST00000544910 RNF123Q5XPI4 1314 aa7.2□□□□□ -1.26
VPS50-220ENST00000544910 ELL2O00472 640 aaPredicted RBP7.2□□□□□ -1.26
VPS50-220ENST00000544910 MVPQ14764 893 aaKnown RBP7.2□□□□□ -1.26
VPS50-220ENST00000544910 TSR2Q969E8 191 aaKnown RBP7.2□□□□□ -1.26
VPS50-220ENST00000544910 NOB1Q9ULX3 412 aaKnown RBP7.2□□□□□ -1.26
VPS50-220ENST00000544910 GOLGA6L3A6NEY3 463 aa7.2□□□□□ -1.26
VPS50-220ENST00000544910 DDX11L8A8MPP1 907 aa7.2□□□□□ -1.26
VPS50-220ENST00000544910 ATP10AO60312 1499 aa7.2□□□□□ -1.26
VPS50-220ENST00000544910 NFKBIBQ15653 356 aa7.2□□□□□ -1.26
VPS50-220ENST00000544910 CABP1Q9NZU7 370 aa7.2□□□□□ -1.26
VPS50-220ENST00000544910 NUTM2FA1L443 756 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 CHAF1AQ13111 956 aaPredicted RBP7.19□□□□□ -1.26
VPS50-220ENST00000544910 PRKAR2BP31323 418 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 LMOD2Q6P5Q4 547 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 TET3O43151 1660 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 POLR3AO14802 1390 aaPredicted RBP7.19□□□□□ -1.26
VPS50-220ENST00000544910 ZFYVE16Q7Z3T8 1539 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 SLC4A10Q6U841 1118 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 ANKRD36BQ8N2N9 1353 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 NPC1L1Q9UHC9 1359 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 LAMC1P11047 1609 aa7.19□□□□□ -1.26
VPS50-220ENST00000544910 GZF1Q9H116 711 aaPredicted RBP7.18□□□□□ -1.26
VPS50-220ENST00000544910 PLEKHH1Q9ULM0 1364 aa7.18□□□□□ -1.26
VPS50-220ENST00000544910 RARSP54136 660 aaKnown RBP7.18□□□□□ -1.26
VPS50-220ENST00000544910 C22orf23Q9BZE7 217 aa7.18□□□□□ -1.26
VPS50-220ENST00000544910 KIF1BO60333 1816 aa7.18□□□□□ -1.26
VPS50-220ENST00000544910 SPHKAPQ2M3C7 1700 aa7.18□□□□□ -1.26
VPS50-220ENST00000544910 ABCC11Q96J66 1382 aa7.18□□□□□ -1.26
VPS50-220ENST00000544910 CHMP4AQ9BY43 222 aa7.18□□□□□ -1.26
VPS50-220ENST00000544910 TMPOP42166 694 aaKnown RBP7.17□□□□□ -1.26
VPS50-220ENST00000544910 MYOM2P54296 1465 aa7.17□□□□□ -1.26
VPS50-220ENST00000544910 FOXD4L1Q9NU39 408 aa7.17□□□□□ -1.26
VPS50-220ENST00000544910 FCHSD2O94868 740 aa7.17□□□□□ -1.26
VPS50-220ENST00000544910 ATF7IPQ6VMQ6 1270 aa7.17□□□□□ -1.26
VPS50-220ENST00000544910 SKAP1Q86WV1 359 aa7.17□□□□□ -1.26
VPS50-220ENST00000544910 ERCC6L2Q5T890 1561 aa7.16□□□□□ -1.26
VPS50-220ENST00000544910 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.16□□□□□ -1.26
VPS50-220ENST00000544910 CHMP5Q9NZZ3 219 aa7.16□□□□□ -1.26
VPS50-220ENST00000544910 ST18O60284 1047 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms