RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
PCMTD1-208ENST00000544451 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
PCMTD1-208ENST00000544451 TMEM57Q8N5G2 664 aa16.56■□□□□ 0.24
PCMTD1-208ENST00000544451 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
PCMTD1-208ENST00000544451 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
PCMTD1-208ENST00000544451 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
PCMTD1-208ENST00000544451 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
PCMTD1-208ENST00000544451 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
PCMTD1-208ENST00000544451 PLCB2Q00722 1185 aa16.55■□□□□ 0.24
PCMTD1-208ENST00000544451 MAGI2Q86UL8 1455 aa16.55■□□□□ 0.24
PCMTD1-208ENST00000544451 MCM4P33991 863 aa16.54■□□□□ 0.24
PCMTD1-208ENST00000544451 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
PCMTD1-208ENST00000544451 GLIPR1L2Q4G1C9 344 aa16.53■□□□□ 0.24
PCMTD1-208ENST00000544451 DDX49Q9Y6V7 483 aaKnown RBP16.53■□□□□ 0.24
PCMTD1-208ENST00000544451 TRIM27P14373 513 aa16.52■□□□□ 0.24
PCMTD1-208ENST00000544451 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
PCMTD1-208ENST00000544451 ATF7IPQ6VMQ6 1270 aa16.52■□□□□ 0.23
PCMTD1-208ENST00000544451 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.23
PCMTD1-208ENST00000544451 BLMP54132 1417 aaPredicted RBP16.51■□□□□ 0.23
PCMTD1-208ENST00000544451 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
PCMTD1-208ENST00000544451 TRAPPC8Q9Y2L5 1435 aa16.51■□□□□ 0.23
PCMTD1-208ENST00000544451 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
PCMTD1-208ENST00000544451 PTMAP06454 111 aaKnown RBP16.5■□□□□ 0.23
PCMTD1-208ENST00000544451 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
PCMTD1-208ENST00000544451 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
PCMTD1-208ENST00000544451 ZMYM4Q5VZL5 1548 aa16.5■□□□□ 0.23
PCMTD1-208ENST00000544451 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
PCMTD1-208ENST00000544451 PRAM1Q96QH2 718 aa16.5■□□□□ 0.23
PCMTD1-208ENST00000544451 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
PCMTD1-208ENST00000544451 TBC1D32Q96NH3 1257 aa16.49■□□□□ 0.23
PCMTD1-208ENST00000544451 RAPGEF3O95398 923 aa16.49■□□□□ 0.23
PCMTD1-208ENST00000544451 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
PCMTD1-208ENST00000544451 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
PCMTD1-208ENST00000544451 ASXL1Q8IXJ9 1541 aa16.48■□□□□ 0.23
PCMTD1-208ENST00000544451 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
PCMTD1-208ENST00000544451 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
PCMTD1-208ENST00000544451 DDX11L8A8MPP1 907 aa16.48■□□□□ 0.23
PCMTD1-208ENST00000544451 CABP1Q9NZU7 370 aa16.48■□□□□ 0.23
PCMTD1-208ENST00000544451 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
PCMTD1-208ENST00000544451 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
PCMTD1-208ENST00000544451 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
PCMTD1-208ENST00000544451 MSNP26038 577 aaKnown RBP16.46■□□□□ 0.23
PCMTD1-208ENST00000544451 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.22
PCMTD1-208ENST00000544451 CEP170Q5SW79 1584 aa16.45■□□□□ 0.22
PCMTD1-208ENST00000544451 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
PCMTD1-208ENST00000544451 NOS1P29475 1434 aa16.45■□□□□ 0.22
PCMTD1-208ENST00000544451 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
PCMTD1-208ENST00000544451 XRCC6P12956 609 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCMTD1-208ENST00000544451 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
PCMTD1-208ENST00000544451 VSIG10Q8N0Z9 540 aa16.44■□□□□ 0.22
PCMTD1-208ENST00000544451 STAC3Q96MF2 364 aa16.44■□□□□ 0.22
PCMTD1-208ENST00000544451 MPNDQ8N594 471 aa16.43■□□□□ 0.22
PCMTD1-208ENST00000544451 ADGBQ8N7X0 1667 aa16.43■□□□□ 0.22
PCMTD1-208ENST00000544451 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
PCMTD1-208ENST00000544451 CHD1LQ86WJ1 897 aa16.43■□□□□ 0.22
PCMTD1-208ENST00000544451 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
PCMTD1-208ENST00000544451 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
PCMTD1-208ENST00000544451 HSP90AA2PQ14568 343 aaPredicted RBP16.42■□□□□ 0.22
PCMTD1-208ENST00000544451 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
PCMTD1-208ENST00000544451 RRAGDQ9NQL2 400 aaPredicted RBP16.42■□□□□ 0.22
PCMTD1-208ENST00000544451 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
PCMTD1-208ENST00000544451 GRPEL1Q9HAV7 217 aa16.41■□□□□ 0.22
PCMTD1-208ENST00000544451 RRS1Q15050 365 aaKnown RBP16.41■□□□□ 0.22
PCMTD1-208ENST00000544451 MRE11P49959 708 aa16.4■□□□□ 0.22
PCMTD1-208ENST00000544451 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
PCMTD1-208ENST00000544451 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
PCMTD1-208ENST00000544451 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
PCMTD1-208ENST00000544451 CAVIN1Q6NZI2 390 aaKnown RBP16.39■□□□□ 0.21
PCMTD1-208ENST00000544451 WAPLQ7Z5K2 1190 aa16.39■□□□□ 0.21
PCMTD1-208ENST00000544451 RNF214Q8ND24 703 aa16.39■□□□□ 0.21
PCMTD1-208ENST00000544451 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
PCMTD1-208ENST00000544451 KDM5DQ9BY66 1539 aa16.39■□□□□ 0.21
PCMTD1-208ENST00000544451 TNPO1Q92973 898 aaKnown RBP16.39■□□□□ 0.21
PCMTD1-208ENST00000544451 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
PCMTD1-208ENST00000544451 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
PCMTD1-208ENST00000544451 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
PCMTD1-208ENST00000544451 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
PCMTD1-208ENST00000544451 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
PCMTD1-208ENST00000544451 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
PCMTD1-208ENST00000544451 SSFA2P28290 1259 aa16.37■□□□□ 0.21
PCMTD1-208ENST00000544451 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
PCMTD1-208ENST00000544451 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
PCMTD1-208ENST00000544451 USP19O94966 1318 aa16.37■□□□□ 0.21
PCMTD1-208ENST00000544451 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
PCMTD1-208ENST00000544451 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
PCMTD1-208ENST00000544451 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
PCMTD1-208ENST00000544451 NINLQ9Y2I6 1382 aa16.35■□□□□ 0.21
PCMTD1-208ENST00000544451 NASPP49321 788 aaPredicted RBP16.35■□□□□ 0.21
PCMTD1-208ENST00000544451 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
PCMTD1-208ENST00000544451 IDI1Q13907 227 aa16.34■□□□□ 0.21
PCMTD1-208ENST00000544451 PRPF40AO75400 957 aaKnown RBP16.34■□□□□ 0.21
PCMTD1-208ENST00000544451 AAMPQ13685 434 aa16.34■□□□□ 0.21
PCMTD1-208ENST00000544451 COG3Q96JB2 828 aa16.34■□□□□ 0.21
PCMTD1-208ENST00000544451 NUP160Q12769 1436 aa16.34■□□□□ 0.21
PCMTD1-208ENST00000544451 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
PCMTD1-208ENST00000544451 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
PCMTD1-208ENST00000544451 ESPNB1AK53 854 aa16.33■□□□□ 0.2
PCMTD1-208ENST00000544451 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.2
PCMTD1-208ENST00000544451 DUOX2Q9NRD8 1548 aa16.33■□□□□ 0.2
PCMTD1-208ENST00000544451 CDC42BPAQ5VT25 1732 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms