RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, human

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPPL3-208	ENST00000543854	WAPL	Q7Z5K2	1190 aa		27.79	■■■□□ 2.04
SPPL3-208	ENST00000543854	DLC1	Q96QB1	1528 aa		27.77	■■■□□ 2.04
SPPL3-208	ENST00000543854	SHPRH	Q149N8	1683 aa		27.77	■■■□□ 2.04
SPPL3-208	ENST00000543854	TRIM26	Q12899	539 aa	Predicted RBP	27.75	■■■□□ 2.03
SPPL3-208	ENST00000543854	ILDR2	Q71H61	639 aa		27.74	■■■□□ 2.03
SPPL3-208	ENST00000543854	SIRT1	Q96EB6	747 aa		27.74	■■■□□ 2.03
SPPL3-208	ENST00000543854	FMN2	Q9NZ56	1722 aa		27.72	■■■□□ 2.03
SPPL3-208	ENST00000543854	KIAA1210	Q9ULL0	1709 aa		27.7	■■■□□ 2.02
SPPL3-208	ENST00000543854	PRAM1	Q96QH2	718 aa		27.69	■■■□□ 2.02
SPPL3-208	ENST00000543854	ORAI2	Q96SN7	254 aa		27.69	■■■□□ 2.02
SPPL3-208	ENST00000543854	SPATA31A6	Q5VVP1	1343 aa		27.68	■■■□□ 2.02
SPPL3-208	ENST00000543854	DDX17	Q92841	729 aa	Known RBP	27.67	■■■□□ 2.02
SPPL3-208	ENST00000543854	ADGRB2	O60241	1585 aa		27.66	■■■□□ 2.02
SPPL3-208	ENST00000543854	POGK	Q9P215	609 aa		27.66	■■■□□ 2.02
SPPL3-208	ENST00000543854	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
SPPL3-208	ENST00000543854	TRAK1	Q9UPV9	953 aa		27.65	■■■□□ 2.02
SPPL3-208	ENST00000543854	ESCO1	Q5FWF5	840 aa		27.64	■■■□□ 2.02
SPPL3-208	ENST00000543854	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.64	■■■□□ 2.01
SPPL3-208	ENST00000543854	LRP6	O75581	1613 aa		27.63	■■■□□ 2.01
SPPL3-208	ENST00000543854	KIF1A	Q12756	1690 aa		27.63	■■■□□ 2.01
SPPL3-208	ENST00000543854	LRRC59	Q96AG4	307 aa	Known RBP	27.63	■■■□□ 2.01
SPPL3-208	ENST00000543854	NUTM2F	A1L443	756 aa		27.62	■■■□□ 2.01
SPPL3-208	ENST00000543854	SOS2	Q07890	1332 aa	Predicted RBP	27.6	■■■□□ 2.01
SPPL3-208	ENST00000543854	NPHP3	Q7Z494	1330 aa		27.6	■■■□□ 2.01
SPPL3-208	ENST00000543854	SIN3A	Q96ST3	1273 aa		27.59	■■■□□ 2.01
SPPL3-208	ENST00000543854	PNPLA6	Q8IY17	1366 aa		27.59	■■■□□ 2.01
SPPL3-208	ENST00000543854	MEX3C	Q5U5Q3	659 aa	Known RBP	27.57	■■■□□ 2
SPPL3-208	ENST00000543854	RGPD8	O14715	1765 aa	Predicted RBP	27.56	■■■□□ 2
SPPL3-208	ENST00000543854	NEUROD1	Q13562	356 aa		27.56	■■■□□ 2
SPPL3-208	ENST00000543854	L3MBTL2	Q969R5	705 aa		27.56	■■■□□ 2
SPPL3-208	ENST00000543854	PXDN	Q92626	1479 aa		27.56	■■■□□ 2
SPPL3-208	ENST00000543854	ANKAR	Q7Z5J8	1434 aa		27.55	■■■□□ 2
SPPL3-208	ENST00000543854	EIF3A	Q14152	1382 aa	Known RBP	27.54	■■■□□ 2
SPPL3-208	ENST00000543854	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.54	■■■□□ 2
SPPL3-208	ENST00000543854	RGS17	Q9UGC6	210 aa	Predicted RBP	27.54	■■■□□ 2
SPPL3-208	ENST00000543854	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.53	■■■□□ 2
SPPL3-208	ENST00000543854	NUTM2E	B1AL46	878 aa	Predicted RBP	27.53	■■■□□ 2
SPPL3-208	ENST00000543854	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.53	■■■□□ 2
SPPL3-208	ENST00000543854	USP32	Q8NFA0	1604 aa		27.52	■■■□□ 2
SPPL3-208	ENST00000543854	FOXO3	O43524	673 aa		27.52	■■■□□ 2
SPPL3-208	ENST00000543854	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.51	■■□□□ 1.99
SPPL3-208	ENST00000543854	TULP4	Q9NRJ4	1543 aa		27.51	■■□□□ 1.99
SPPL3-208	ENST00000543854	TRPM1	Q7Z4N2	1603 aa		27.5	■■□□□ 1.99
SPPL3-208	ENST00000543854	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.5	■■□□□ 1.99
SPPL3-208	ENST00000543854	SOCS7	O14512	581 aa		27.5	■■□□□ 1.99
SPPL3-208	ENST00000543854	XPC	Q01831	940 aa	Predicted RBP	27.48	■■□□□ 1.99
SPPL3-208	ENST00000543854	NBPF1	Q3BBV0	1214 aa		27.48	■■□□□ 1.99
SPPL3-208	ENST00000543854	PHF8	Q9UPP1	1060 aa		27.47	■■□□□ 1.99
SPPL3-208	ENST00000543854	WASL	O00401	505 aa	Predicted RBP	27.45	■■□□□ 1.98
SPPL3-208	ENST00000543854	ITSN1	Q15811	1721 aa		27.44	■■□□□ 1.98
SPPL3-208	ENST00000543854	POTEA	Q6S8J7	498 aa		27.42	■■□□□ 1.98
SPPL3-208	ENST00000543854	TONSL	Q96HA7	1378 aa		27.42	■■□□□ 1.98
SPPL3-208	ENST00000543854	QRICH2	Q9H0J4	1663 aa		27.41	■■□□□ 1.98
SPPL3-208	ENST00000543854	ROCK2	O75116	1388 aa	Known RBP	27.4	■■□□□ 1.98
SPPL3-208	ENST00000543854	ZNF772	Q68DY9	489 aa	Predicted RBP	27.4	■■□□□ 1.98
SPPL3-208	ENST00000543854	PRR36	Q9H6K5	1346 aa		27.4	■■□□□ 1.98
SPPL3-208	ENST00000543854	ATP7B	P35670	1465 aa		27.39	■■□□□ 1.98
SPPL3-208	ENST00000543854	KRT28	Q7Z3Y7	464 aa		27.39	■■□□□ 1.98
SPPL3-208	ENST00000543854	TNS3	Q68CZ2	1445 aa		27.38	■■□□□ 1.97
SPPL3-208	ENST00000543854	SPATA31A3	Q5VYP0	1347 aa		27.38	■■□□□ 1.97
SPPL3-208	ENST00000543854	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.38	■■□□□ 1.97
SPPL3-208	ENST00000543854	ADAMTS2	O95450	1211 aa		27.37	■■□□□ 1.97
SPPL3-208	ENST00000543854	PSME1	Q06323	249 aa		27.37	■■□□□ 1.97
SPPL3-208	ENST00000543854	PMFBP1	Q8TBY8	1022 aa		27.37	■■□□□ 1.97
SPPL3-208	ENST00000543854	C8orf37	Q96NL8	207 aa		27.37	■■□□□ 1.97
SPPL3-208	ENST00000543854	AFF2	P51816	1311 aa		27.36	■■□□□ 1.97
SPPL3-208	ENST00000543854	TOPAZ1	Q8N9V7	1692 aa		27.35	■■□□□ 1.97
SPPL3-208	ENST00000543854	SBNO1	A3KN83	1393 aa		27.35	■■□□□ 1.97
SPPL3-208	ENST00000543854	MARF1	Q9Y4F3	1742 aa	Known RBP	27.33	■■□□□ 1.97
SPPL3-208	ENST00000543854	GPRASP1	Q5JY77	1395 aa		27.33	■■□□□ 1.97
SPPL3-208	ENST00000543854	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.33	■■□□□ 1.96
SPPL3-208	ENST00000543854	CDK19	Q9BWU1	502 aa		27.32	■■□□□ 1.96
SPPL3-208	ENST00000543854	NUDT16	Q96DE0	195 aa	Known RBP	27.31	■■□□□ 1.96
SPPL3-208	ENST00000543854	ARHGEF10	O15013	1369 aa		27.31	■■□□□ 1.96
SPPL3-208	ENST00000543854	NGLY1	Q96IV0	654 aa		27.3	■■□□□ 1.96
SPPL3-208	ENST00000543854	RALGAPB	Q86X10	1494 aa		27.3	■■□□□ 1.96
SPPL3-208	ENST00000543854	NBPF8	Q3BBV2	869 aa		27.29	■■□□□ 1.96
SPPL3-208	ENST00000543854	NGDN	Q8NEJ9	315 aa	Known RBP	27.29	■■□□□ 1.96
SPPL3-208	ENST00000543854	ABCA3	Q99758	1704 aa		27.28	■■□□□ 1.96
SPPL3-208	ENST00000543854	ALS2	Q96Q42	1657 aa		27.27	■■□□□ 1.96
SPPL3-208	ENST00000543854	LMOD2	Q6P5Q4	547 aa		27.26	■■□□□ 1.95
SPPL3-208	ENST00000543854	SRPK2	P78362	688 aa	Known RBP	27.25	■■□□□ 1.95
SPPL3-208	ENST00000543854	PCGF6	Q9BYE7	350 aa		27.24	■■□□□ 1.95
SPPL3-208	ENST00000543854	CCDC61	Q9Y6R9	512 aa		27.24	■■□□□ 1.95
SPPL3-208	ENST00000543854	HAP1	P54257	671 aa	Predicted RBP	27.23	■■□□□ 1.95
SPPL3-208	ENST00000543854	POLR3A	O14802	1390 aa	Predicted RBP	27.22	■■□□□ 1.95
SPPL3-208	ENST00000543854	RXRB	P28702	533 aa		27.21	■■□□□ 1.95
SPPL3-208	ENST00000543854	CARD11	Q9BXL7	1154 aa		27.21	■■□□□ 1.95
SPPL3-208	ENST00000543854	PPIP5K1	Q6PFW1	1433 aa		27.2	■■□□□ 1.94
SPPL3-208	ENST00000543854	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.2	■■□□□ 1.94
SPPL3-208	ENST00000543854	USP21	Q9UK80	565 aa		27.2	■■□□□ 1.94
SPPL3-208	ENST00000543854	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.19	■■□□□ 1.94
SPPL3-208	ENST00000543854	EVC2	Q86UK5	1308 aa		27.19	■■□□□ 1.94
SPPL3-208	ENST00000543854	CABP2	Q9NPB3	220 aa		27.19	■■□□□ 1.94
SPPL3-208	ENST00000543854	PLEKHG5	O94827	1062 aa		27.18	■■□□□ 1.94
SPPL3-208	ENST00000543854	PAK3	O75914	559 aa	Predicted RBP	27.17	■■□□□ 1.94
SPPL3-208	ENST00000543854	CABLES1	Q8TDN4	633 aa		27.17	■■□□□ 1.94
SPPL3-208	ENST00000543854	QTRT2	Q9H974	415 aa	Known RBP	27.17	■■□□□ 1.94
SPPL3-208	ENST00000543854	ACE	P12821	1306 aa		27.16	■■□□□ 1.94
SPPL3-208	ENST00000543854	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.16	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms