RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 C14orf93Q9H972 538 aaKnown RBP16.44■□□□□ 0.22
COPS7A-217ENST00000543537 KNDC1Q76NI1 1749 aa16.43■□□□□ 0.22
COPS7A-217ENST00000543537 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
COPS7A-217ENST00000543537 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
COPS7A-217ENST00000543537 YTHDC2Q9H6S0 1430 aaKnown RBP16.41■□□□□ 0.22
COPS7A-217ENST00000543537 LRP6O75581 1613 aa16.4■□□□□ 0.22
COPS7A-217ENST00000543537 LRRC59Q96AG4 307 aaKnown RBP16.39■□□□□ 0.21
COPS7A-217ENST00000543537 TMEM132EQ6IEE7 984 aa16.38■□□□□ 0.21
COPS7A-217ENST00000543537 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-217ENST00000543537 POTEAQ6S8J7 498 aa16.37■□□□□ 0.21
COPS7A-217ENST00000543537 CFAP70Q5T0N1 1121 aa16.35■□□□□ 0.21
COPS7A-217ENST00000543537 WAPLQ7Z5K2 1190 aa16.35■□□□□ 0.21
COPS7A-217ENST00000543537 ORAI2Q96SN7 254 aa16.35■□□□□ 0.21
COPS7A-217ENST00000543537 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
COPS7A-217ENST00000543537 PLEKHH1Q9ULM0 1364 aa16.35■□□□□ 0.21
COPS7A-217ENST00000543537 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
COPS7A-217ENST00000543537 ADGRB1O14514 1584 aa16.34■□□□□ 0.21
COPS7A-217ENST00000543537 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-217ENST00000543537 STK26Q9P289 416 aa16.34■□□□□ 0.21
COPS7A-217ENST00000543537 TONSLQ96HA7 1378 aa16.34■□□□□ 0.21
COPS7A-217ENST00000543537 DDX17Q92841 729 aaKnown RBP16.32■□□□□ 0.2
COPS7A-217ENST00000543537 NPHP3Q7Z494 1330 aa16.31■□□□□ 0.2
COPS7A-217ENST00000543537 ZNF772Q68DY9 489 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-217ENST00000543537 FMN2Q9NZ56 1722 aa16.3■□□□□ 0.2
COPS7A-217ENST00000543537 PXDNQ92626 1479 aa16.29■□□□□ 0.2
COPS7A-217ENST00000543537 DCAF11Q8TEB1 546 aa16.29■□□□□ 0.2
COPS7A-217ENST00000543537 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
COPS7A-217ENST00000543537 ESCO1Q5FWF5 840 aa16.28■□□□□ 0.2
COPS7A-217ENST00000543537 MEX3CQ5U5Q3 659 aaKnown RBP16.28■□□□□ 0.2
COPS7A-217ENST00000543537 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.2
COPS7A-217ENST00000543537 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
COPS7A-217ENST00000543537 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
COPS7A-217ENST00000543537 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
COPS7A-217ENST00000543537 ANKARQ7Z5J8 1434 aa16.25■□□□□ 0.19
COPS7A-217ENST00000543537 NUTM2BA6NNL0 878 aaPredicted RBP16.24■□□□□ 0.19
COPS7A-217ENST00000543537 NUTM2EB1AL46 878 aaPredicted RBP16.24■□□□□ 0.19
COPS7A-217ENST00000543537 FOXO3O43524 673 aa16.24■□□□□ 0.19
COPS7A-217ENST00000543537 NUTM2AQ8IVF1 878 aaPredicted RBP16.24■□□□□ 0.19
COPS7A-217ENST00000543537 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
COPS7A-217ENST00000543537 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
COPS7A-217ENST00000543537 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
COPS7A-217ENST00000543537 AFF2P51816 1311 aa16.22■□□□□ 0.19
COPS7A-217ENST00000543537 POGKQ9P215 609 aa16.21■□□□□ 0.19
COPS7A-217ENST00000543537 TRAK1Q9UPV9 953 aa16.21■□□□□ 0.19
COPS7A-217ENST00000543537 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
COPS7A-217ENST00000543537 SPATA31A3Q5VYP0 1347 aa16.2■□□□□ 0.18
COPS7A-217ENST00000543537 NUTM2FA1L443 756 aa16.2■□□□□ 0.18
COPS7A-217ENST00000543537 FNBP4Q8N3X1 1017 aaPredicted RBP16.2■□□□□ 0.18
COPS7A-217ENST00000543537 PHF8Q9UPP1 1060 aa16.2■□□□□ 0.18
COPS7A-217ENST00000543537 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
COPS7A-217ENST00000543537 RXRBP28702 533 aa16.19■□□□□ 0.18
COPS7A-217ENST00000543537 C8orf37Q96NL8 207 aa16.19■□□□□ 0.18
COPS7A-217ENST00000543537 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
COPS7A-217ENST00000543537 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
COPS7A-217ENST00000543537 SAFB2Q14151 953 aaKnown RBP eCLIP16.17■□□□□ 0.18
COPS7A-217ENST00000543537 TULP4Q9NRJ4 1543 aa16.17■□□□□ 0.18
COPS7A-217ENST00000543537 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
COPS7A-217ENST00000543537 RGPD8O14715 1765 aaPredicted RBP16.16■□□□□ 0.18
COPS7A-217ENST00000543537 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
COPS7A-217ENST00000543537 ADAMTS2O95450 1211 aa16.16■□□□□ 0.18
COPS7A-217ENST00000543537 XPCQ01831 940 aaPredicted RBP16.16■□□□□ 0.18
COPS7A-217ENST00000543537 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
COPS7A-217ENST00000543537 NGLY1Q96IV0 654 aa16.16■□□□□ 0.18
COPS7A-217ENST00000543537 RBM6P78332 1123 aaKnown RBP16.15■□□□□ 0.18
COPS7A-217ENST00000543537 PSME1Q06323 249 aa16.15■□□□□ 0.18
COPS7A-217ENST00000543537 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
COPS7A-217ENST00000543537 QTRT2Q9H974 415 aaKnown RBP16.15■□□□□ 0.18
COPS7A-217ENST00000543537 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
COPS7A-217ENST00000543537 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
COPS7A-217ENST00000543537 MINK1Q8N4C8 1332 aaPredicted RBP16.13■□□□□ 0.17
COPS7A-217ENST00000543537 ARHGEF10O15013 1369 aa16.13■□□□□ 0.17
COPS7A-217ENST00000543537 ATRNO75882 1429 aa16.12■□□□□ 0.17
COPS7A-217ENST00000543537 BCL9LQ86UU0 1499 aa16.12■□□□□ 0.17
COPS7A-217ENST00000543537 MARF1Q9Y4F3 1742 aaKnown RBP16.12■□□□□ 0.17
COPS7A-217ENST00000543537 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-217ENST00000543537 USP21Q9UK80 565 aa16.12■□□□□ 0.17
COPS7A-217ENST00000543537 TRPC5Q9UL62 973 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-217ENST00000543537 ATP7BP35670 1465 aa16.11■□□□□ 0.17
COPS7A-217ENST00000543537 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
COPS7A-217ENST00000543537 SLIT2O94813 1529 aa16.1■□□□□ 0.17
COPS7A-217ENST00000543537 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
COPS7A-217ENST00000543537 RGS12O14924 1447 aa16.1■□□□□ 0.17
COPS7A-217ENST00000543537 TRPM3Q9HCF6 1732 aaPredicted RBP16.09■□□□□ 0.17
COPS7A-217ENST00000543537 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
COPS7A-217ENST00000543537 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.08■□□□□ 0.17
COPS7A-217ENST00000543537 GPRASP1Q5JY77 1395 aa16.08■□□□□ 0.16
COPS7A-217ENST00000543537 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.16
COPS7A-217ENST00000543537 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
COPS7A-217ENST00000543537 ALS2Q96Q42 1657 aa16.07■□□□□ 0.16
COPS7A-217ENST00000543537 ITSN1Q15811 1721 aa16.06■□□□□ 0.16
COPS7A-217ENST00000543537 POLR3AO14802 1390 aaPredicted RBP16.06■□□□□ 0.16
COPS7A-217ENST00000543537 UNC5CLQ8IV45 518 aa16.05■□□□□ 0.16
COPS7A-217ENST00000543537 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
COPS7A-217ENST00000543537 CCDC61Q9Y6R9 512 aa16.05■□□□□ 0.16
COPS7A-217ENST00000543537 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
COPS7A-217ENST00000543537 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
COPS7A-217ENST00000543537 PLEKHG3A1L390 1219 aa16.04■□□□□ 0.16
COPS7A-217ENST00000543537 EIF4G2P78344 907 aaKnown RBP eCLIP16.04■□□□□ 0.16
COPS7A-217ENST00000543537 TOPAZ1Q8N9V7 1692 aa16.04■□□□□ 0.16
COPS7A-217ENST00000543537 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms