RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 SHPRHQ149N8 1683 aa25.5■■□□□ 1.67
LTBR-210ENST00000542830 WAPLQ7Z5K2 1190 aa25.5■■□□□ 1.67
LTBR-210ENST00000542830 RGS17Q9UGC6 210 aaPredicted RBP25.5■■□□□ 1.67
LTBR-210ENST00000542830 LRRC59Q96AG4 307 aaKnown RBP25.49■■□□□ 1.67
LTBR-210ENST00000542830 DCAF11Q8TEB1 546 aa25.48■■□□□ 1.67
LTBR-210ENST00000542830 PLEKHH1Q9ULM0 1364 aa25.46■■□□□ 1.67
LTBR-210ENST00000542830 ORAI2Q96SN7 254 aa25.46■■□□□ 1.67
LTBR-210ENST00000542830 KDM2AQ9Y2K7 1162 aa25.46■■□□□ 1.67
LTBR-210ENST00000542830 DDX17Q92841 729 aaKnown RBP25.44■■□□□ 1.66
LTBR-210ENST00000542830 MEX3CQ5U5Q3 659 aaKnown RBP25.43■■□□□ 1.66
LTBR-210ENST00000542830 LRP6O75581 1613 aa25.42■■□□□ 1.66
LTBR-210ENST00000542830 ESCO1Q5FWF5 840 aa25.41■■□□□ 1.66
LTBR-210ENST00000542830 DLC1Q96QB1 1528 aa25.41■■□□□ 1.66
LTBR-210ENST00000542830 SOS2Q07890 1332 aaPredicted RBP25.4■■□□□ 1.66
LTBR-210ENST00000542830 ADGRB1O14514 1584 aa25.39■■□□□ 1.66
LTBR-210ENST00000542830 NPHP3Q7Z494 1330 aa25.38■■□□□ 1.65
LTBR-210ENST00000542830 PRAM1Q96QH2 718 aa25.38■■□□□ 1.65
LTBR-210ENST00000542830 PNPLA6Q8IY17 1366 aa25.38■■□□□ 1.65
LTBR-210ENST00000542830 NUTM2BA6NNL0 878 aaPredicted RBP25.37■■□□□ 1.65
LTBR-210ENST00000542830 NUTM2EB1AL46 878 aaPredicted RBP25.37■■□□□ 1.65
LTBR-210ENST00000542830 POTEAQ6S8J7 498 aa25.37■■□□□ 1.65
LTBR-210ENST00000542830 NUTM2AQ8IVF1 878 aaPredicted RBP25.37■■□□□ 1.65
LTBR-210ENST00000542830 POGKQ9P215 609 aa25.37■■□□□ 1.65
LTBR-210ENST00000542830 FMN2Q9NZ56 1722 aa25.35■■□□□ 1.65
LTBR-210ENST00000542830 NUTM2FA1L443 756 aa25.35■■□□□ 1.65
LTBR-210ENST00000542830 ZNF772Q68DY9 489 aaPredicted RBP25.34■■□□□ 1.65
LTBR-210ENST00000542830 TRAK1Q9UPV9 953 aa25.34■■□□□ 1.65
LTBR-210ENST00000542830 SAFB2Q14151 953 aaKnown RBP eCLIP25.32■■□□□ 1.64
LTBR-210ENST00000542830 FOXO3O43524 673 aa25.31■■□□□ 1.64
LTBR-210ENST00000542830 PXDNQ92626 1479 aa25.29■■□□□ 1.64
LTBR-210ENST00000542830 KIF1AQ12756 1690 aa25.29■■□□□ 1.64
LTBR-210ENST00000542830 ADGRB2O60241 1585 aa25.27■■□□□ 1.64
LTBR-210ENST00000542830 PHF8Q9UPP1 1060 aa25.25■■□□□ 1.63
LTBR-210ENST00000542830 EIF3AQ14152 1382 aaKnown RBP25.25■■□□□ 1.63
LTBR-210ENST00000542830 ANKARQ7Z5J8 1434 aa25.25■■□□□ 1.63
LTBR-210ENST00000542830 KIAA1210Q9ULL0 1709 aa25.24■■□□□ 1.63
LTBR-210ENST00000542830 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
LTBR-210ENST00000542830 AFF2P51816 1311 aa25.23■■□□□ 1.63
LTBR-210ENST00000542830 XPCQ01831 940 aaPredicted RBP25.23■■□□□ 1.63
LTBR-210ENST00000542830 C8orf37Q96NL8 207 aa25.23■■□□□ 1.63
LTBR-210ENST00000542830 MINK1Q8N4C8 1332 aaPredicted RBP25.22■■□□□ 1.63
LTBR-210ENST00000542830 ADAMTS2O95450 1211 aa25.21■■□□□ 1.63
LTBR-210ENST00000542830 HIRIP3Q9BW71 556 aaPredicted RBP25.21■■□□□ 1.63
LTBR-210ENST00000542830 PSME1Q06323 249 aa25.2■■□□□ 1.62
LTBR-210ENST00000542830 KRT28Q7Z3Y7 464 aa25.2■■□□□ 1.62
LTBR-210ENST00000542830 RGPD8O14715 1765 aaPredicted RBP25.19■■□□□ 1.62
LTBR-210ENST00000542830 WASLO00401 505 aaPredicted RBP25.19■■□□□ 1.62
LTBR-210ENST00000542830 ARHGEF28Q8N1W1 1705 aaKnown RBP25.19■■□□□ 1.62
LTBR-210ENST00000542830 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
LTBR-210ENST00000542830 NGLY1Q96IV0 654 aa25.18■■□□□ 1.62
LTBR-210ENST00000542830 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
LTBR-210ENST00000542830 TULP4Q9NRJ4 1543 aa25.17■■□□□ 1.62
LTBR-210ENST00000542830 RXRBP28702 533 aa25.16■■□□□ 1.62
LTBR-210ENST00000542830 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
LTBR-210ENST00000542830 SIN3AQ96ST3 1273 aa25.16■■□□□ 1.62
LTBR-210ENST00000542830 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
LTBR-210ENST00000542830 NBPF1Q3BBV0 1214 aa25.15■■□□□ 1.62
LTBR-210ENST00000542830 SBNO1A3KN83 1393 aa25.14■■□□□ 1.61
LTBR-210ENST00000542830 TNS3Q68CZ2 1445 aa25.13■■□□□ 1.61
LTBR-210ENST00000542830 NEUROD1Q13562 356 aa25.13■■□□□ 1.61
LTBR-210ENST00000542830 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
LTBR-210ENST00000542830 PRR36Q9H6K5 1346 aa25.12■■□□□ 1.61
LTBR-210ENST00000542830 FNBP4Q8N3X1 1017 aaPredicted RBP25.11■■□□□ 1.61
LTBR-210ENST00000542830 QTRT2Q9H974 415 aaKnown RBP25.11■■□□□ 1.61
LTBR-210ENST00000542830 CDK12Q9NYV4 1490 aaPredicted RBP25.1■■□□□ 1.61
LTBR-210ENST00000542830 ARHGEF10O15013 1369 aa25.09■■□□□ 1.61
LTBR-210ENST00000542830 GPRASP1Q5JY77 1395 aa25.09■■□□□ 1.61
LTBR-210ENST00000542830 USP21Q9UK80 565 aa25.09■■□□□ 1.61
LTBR-210ENST00000542830 RBM6P78332 1123 aaKnown RBP25.08■■□□□ 1.61
LTBR-210ENST00000542830 NUDT16Q96DE0 195 aaKnown RBP25.06■■□□□ 1.6
LTBR-210ENST00000542830 CDK19Q9BWU1 502 aa25.06■■□□□ 1.6
LTBR-210ENST00000542830 TRPC5Q9UL62 973 aaPredicted RBP25.06■■□□□ 1.6
LTBR-210ENST00000542830 ATP7BP35670 1465 aa25.05■■□□□ 1.6
LTBR-210ENST00000542830 LMOD2Q6P5Q4 547 aa25.05■■□□□ 1.6
LTBR-210ENST00000542830 NGDNQ8NEJ9 315 aaKnown RBP25.05■■□□□ 1.6
LTBR-210ENST00000542830 MARF1Q9Y4F3 1742 aaKnown RBP25.05■■□□□ 1.6
LTBR-210ENST00000542830 CENPJQ9HC77 1338 aaPredicted RBP25.05■■□□□ 1.6
LTBR-210ENST00000542830 ITSN1Q15811 1721 aa25.04■■□□□ 1.6
LTBR-210ENST00000542830 HAP1P54257 671 aaPredicted RBP25.04■■□□□ 1.6
LTBR-210ENST00000542830 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
LTBR-210ENST00000542830 CCDC61Q9Y6R9 512 aa25■■□□□ 1.59
LTBR-210ENST00000542830 ROCK2O75116 1388 aaKnown RBP25■■□□□ 1.59
LTBR-210ENST00000542830 ATRNO75882 1429 aa25■■□□□ 1.59
LTBR-210ENST00000542830 TRPM3Q9HCF6 1732 aaPredicted RBP25■■□□□ 1.59
LTBR-210ENST00000542830 BCL9LQ86UU0 1499 aa24.99■■□□□ 1.59
LTBR-210ENST00000542830 CABLES1Q8TDN4 633 aa24.98■■□□□ 1.59
LTBR-210ENST00000542830 RGS12O14924 1447 aa24.96■■□□□ 1.59
LTBR-210ENST00000542830 TONSLQ96HA7 1378 aa24.96■■□□□ 1.59
LTBR-210ENST00000542830 SRPK2P78362 688 aaKnown RBP24.96■■□□□ 1.59
LTBR-210ENST00000542830 SLIT2O94813 1529 aa24.96■■□□□ 1.59
LTBR-210ENST00000542830 POLR3AO14802 1390 aaPredicted RBP24.95■■□□□ 1.59
LTBR-210ENST00000542830 ALS2Q96Q42 1657 aa24.95■■□□□ 1.58
LTBR-210ENST00000542830 QRICH2Q9H0J4 1663 aa24.95■■□□□ 1.58
LTBR-210ENST00000542830 PLEKHG3A1L390 1219 aa24.95■■□□□ 1.58
LTBR-210ENST00000542830 PAK3O75914 559 aaPredicted RBP24.95■■□□□ 1.58
LTBR-210ENST00000542830 UNC5CLQ8IV45 518 aa24.95■■□□□ 1.58
LTBR-210ENST00000542830 TOPAZ1Q8N9V7 1692 aa24.94■■□□□ 1.58
LTBR-210ENST00000542830 PLEKHG5O94827 1062 aa24.94■■□□□ 1.58
LTBR-210ENST00000542830 ABCA3Q99758 1704 aa24.93■■□□□ 1.58
LTBR-210ENST00000542830 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms