RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 SHPRHQ149N8 1683 aa32.22■■■□□ 2.75
C2CD3-216ENST00000541922 STAC3Q96MF2 364 aa32.22■■■□□ 2.75
C2CD3-216ENST00000541922 SPATA31A6Q5VVP1 1343 aa32.21■■■□□ 2.75
C2CD3-216ENST00000541922 PLEKHH1Q9ULM0 1364 aa32.2■■■□□ 2.75
C2CD3-216ENST00000541922 DDX17Q92841 729 aaKnown RBP32.19■■■□□ 2.74
C2CD3-216ENST00000541922 SIRT1Q96EB6 747 aa32.19■■■□□ 2.74
C2CD3-216ENST00000541922 ORAI2Q96SN7 254 aa32.18■■■□□ 2.74
C2CD3-216ENST00000541922 RGS17Q9UGC6 210 aaPredicted RBP32.18■■■□□ 2.74
C2CD3-216ENST00000541922 LRRC59Q96AG4 307 aaKnown RBP32.16■■■□□ 2.74
C2CD3-216ENST00000541922 ADGRB1O14514 1584 aa32.11■■■□□ 2.73
C2CD3-216ENST00000541922 ESCO1Q5FWF5 840 aa32.11■■■□□ 2.73
C2CD3-216ENST00000541922 LRP6O75581 1613 aa32.11■■■□□ 2.73
C2CD3-216ENST00000541922 MEX3CQ5U5Q3 659 aaKnown RBP32.1■■■□□ 2.73
C2CD3-216ENST00000541922 DLC1Q96QB1 1528 aa32.1■■■□□ 2.73
C2CD3-216ENST00000541922 NUTM2FA1L443 756 aa32.09■■■□□ 2.73
C2CD3-216ENST00000541922 PRAM1Q96QH2 718 aa32.09■■■□□ 2.73
C2CD3-216ENST00000541922 POGKQ9P215 609 aa32.08■■■□□ 2.73
C2CD3-216ENST00000541922 FMN2Q9NZ56 1722 aa32.08■■■□□ 2.73
C2CD3-216ENST00000541922 NUTM2BA6NNL0 878 aaPredicted RBP32.07■■■□□ 2.72
C2CD3-216ENST00000541922 NUTM2EB1AL46 878 aaPredicted RBP32.07■■■□□ 2.72
C2CD3-216ENST00000541922 SAFB2Q14151 953 aaKnown RBP eCLIP32.07■■■□□ 2.72
C2CD3-216ENST00000541922 NUTM2AQ8IVF1 878 aaPredicted RBP32.07■■■□□ 2.72
C2CD3-216ENST00000541922 SOS2Q07890 1332 aaPredicted RBP32.06■■■□□ 2.72
C2CD3-216ENST00000541922 TRAK1Q9UPV9 953 aa32.06■■■□□ 2.72
C2CD3-216ENST00000541922 PNPLA6Q8IY17 1366 aa32.05■■■□□ 2.72
C2CD3-216ENST00000541922 NPHP3Q7Z494 1330 aa32.03■■■□□ 2.72
C2CD3-216ENST00000541922 POTEAQ6S8J7 498 aa32.03■■■□□ 2.72
C2CD3-216ENST00000541922 FOXO3O43524 673 aa31.99■■■□□ 2.71
C2CD3-216ENST00000541922 RGPD8O14715 1765 aaPredicted RBP31.97■■■□□ 2.71
C2CD3-216ENST00000541922 KIF1AQ12756 1690 aa31.96■■■□□ 2.71
C2CD3-216ENST00000541922 KIAA1210Q9ULL0 1709 aa31.95■■■□□ 2.7
C2CD3-216ENST00000541922 PXDNQ92626 1479 aa31.94■■■□□ 2.7
C2CD3-216ENST00000541922 ADGRB2O60241 1585 aa31.94■■■□□ 2.7
C2CD3-216ENST00000541922 XPCQ01831 940 aaPredicted RBP31.93■■■□□ 2.7
C2CD3-216ENST00000541922 ZNF772Q68DY9 489 aaPredicted RBP31.93■■■□□ 2.7
C2CD3-216ENST00000541922 MINK1Q8N4C8 1332 aaPredicted RBP31.92■■■□□ 2.7
C2CD3-216ENST00000541922 SIN3AQ96ST3 1273 aa31.91■■■□□ 2.7
C2CD3-216ENST00000541922 HIRIP3Q9BW71 556 aaPredicted RBP31.91■■■□□ 2.7
C2CD3-216ENST00000541922 ARHGEF28Q8N1W1 1705 aaKnown RBP31.91■■■□□ 2.7
C2CD3-216ENST00000541922 PHF8Q9UPP1 1060 aa31.9■■■□□ 2.7
C2CD3-216ENST00000541922 TRIM26Q12899 539 aaPredicted RBP31.89■■■□□ 2.7
C2CD3-216ENST00000541922 COL22A1Q8NFW1 1626 aaPredicted RBP31.87■■■□□ 2.69
C2CD3-216ENST00000541922 ANKARQ7Z5J8 1434 aa31.87■■■□□ 2.69
C2CD3-216ENST00000541922 L3MBTL2Q969R5 705 aa31.87■■■□□ 2.69
C2CD3-216ENST00000541922 C8orf37Q96NL8 207 aa31.87■■■□□ 2.69
C2CD3-216ENST00000541922 AFF2P51816 1311 aa31.86■■■□□ 2.69
C2CD3-216ENST00000541922 ADAMTS2O95450 1211 aa31.86■■■□□ 2.69
C2CD3-216ENST00000541922 NEUROD1Q13562 356 aa31.86■■■□□ 2.69
C2CD3-216ENST00000541922 USP32Q8NFA0 1604 aa31.85■■■□□ 2.69
C2CD3-216ENST00000541922 EIF3AQ14152 1382 aaKnown RBP31.84■■■□□ 2.69
C2CD3-216ENST00000541922 NBPF1Q3BBV0 1214 aa31.84■■■□□ 2.69
C2CD3-216ENST00000541922 KRT28Q7Z3Y7 464 aa31.84■■■□□ 2.69
C2CD3-216ENST00000541922 WASLO00401 505 aaPredicted RBP31.83■■■□□ 2.69
C2CD3-216ENST00000541922 SPATA31A3Q5VYP0 1347 aa31.8■■■□□ 2.68
C2CD3-216ENST00000541922 PSME1Q06323 249 aa31.8■■■□□ 2.68
C2CD3-216ENST00000541922 NGLY1Q96IV0 654 aa31.8■■■□□ 2.68
C2CD3-216ENST00000541922 TULP4Q9NRJ4 1543 aa31.8■■■□□ 2.68
C2CD3-216ENST00000541922 PMFBP1Q8TBY8 1022 aa31.79■■■□□ 2.68
C2CD3-216ENST00000541922 PRR36Q9H6K5 1346 aa31.76■■■□□ 2.68
C2CD3-216ENST00000541922 RXRBP28702 533 aa31.74■■■□□ 2.67
C2CD3-216ENST00000541922 TNS3Q68CZ2 1445 aa31.74■■■□□ 2.67
C2CD3-216ENST00000541922 SBNO1A3KN83 1393 aa31.72■■■□□ 2.67
C2CD3-216ENST00000541922 MARF1Q9Y4F3 1742 aaKnown RBP31.71■■■□□ 2.67
C2CD3-216ENST00000541922 QTRT2Q9H974 415 aaKnown RBP31.7■■■□□ 2.67
C2CD3-216ENST00000541922 ITSN1Q15811 1721 aa31.69■■■□□ 2.66
C2CD3-216ENST00000541922 TRPM1Q7Z4N2 1603 aa31.69■■■□□ 2.66
C2CD3-216ENST00000541922 CDK19Q9BWU1 502 aa31.69■■■□□ 2.66
C2CD3-216ENST00000541922 GPRASP1Q5JY77 1395 aa31.68■■■□□ 2.66
C2CD3-216ENST00000541922 LMOD2Q6P5Q4 547 aa31.68■■■□□ 2.66
C2CD3-216ENST00000541922 NUDT16Q96DE0 195 aaKnown RBP31.68■■■□□ 2.66
C2CD3-216ENST00000541922 USP21Q9UK80 565 aa31.68■■■□□ 2.66
C2CD3-216ENST00000541922 FNBP4Q8N3X1 1017 aaPredicted RBP31.67■■■□□ 2.66
C2CD3-216ENST00000541922 NGDNQ8NEJ9 315 aaKnown RBP31.67■■■□□ 2.66
C2CD3-216ENST00000541922 CENPJQ9HC77 1338 aaPredicted RBP31.67■■■□□ 2.66
C2CD3-216ENST00000541922 ATP7BP35670 1465 aa31.66■■■□□ 2.66
C2CD3-216ENST00000541922 ARHGEF10O15013 1369 aa31.66■■■□□ 2.66
C2CD3-216ENST00000541922 HAP1P54257 671 aaPredicted RBP31.64■■■□□ 2.66
C2CD3-216ENST00000541922 TRPM3Q9HCF6 1732 aaPredicted RBP31.63■■■□□ 2.65
C2CD3-216ENST00000541922 RBM6P78332 1123 aaKnown RBP31.63■■■□□ 2.65
C2CD3-216ENST00000541922 CDK12Q9NYV4 1490 aaPredicted RBP31.63■■■□□ 2.65
C2CD3-216ENST00000541922 ROCK2O75116 1388 aaKnown RBP31.62■■■□□ 2.65
C2CD3-216ENST00000541922 QRICH2Q9H0J4 1663 aa31.61■■■□□ 2.65
C2CD3-216ENST00000541922 PLEKHG5O94827 1062 aa31.61■■■□□ 2.65
C2CD3-216ENST00000541922 TRPC5Q9UL62 973 aaPredicted RBP31.61■■■□□ 2.65
C2CD3-216ENST00000541922 CABLES1Q8TDN4 633 aa31.6■■■□□ 2.65
C2CD3-216ENST00000541922 TONSLQ96HA7 1378 aa31.59■■■□□ 2.65
C2CD3-216ENST00000541922 CCDC61Q9Y6R9 512 aa31.59■■■□□ 2.65
C2CD3-216ENST00000541922 TOPAZ1Q8N9V7 1692 aa31.57■■■□□ 2.65
C2CD3-216ENST00000541922 SRPK2P78362 688 aaKnown RBP31.57■■■□□ 2.64
C2CD3-216ENST00000541922 NBPF8Q3BBV2 869 aa31.57■■■□□ 2.64
C2CD3-216ENST00000541922 ALS2Q96Q42 1657 aa31.57■■■□□ 2.64
C2CD3-216ENST00000541922 ABCA3Q99758 1704 aa31.56■■■□□ 2.64
C2CD3-216ENST00000541922 BCL9LQ86UU0 1499 aa31.55■■■□□ 2.64
C2CD3-216ENST00000541922 PAK3O75914 559 aaPredicted RBP31.55■■■□□ 2.64
C2CD3-216ENST00000541922 ATRNO75882 1429 aa31.54■■■□□ 2.64
C2CD3-216ENST00000541922 ACEP12821 1306 aa31.51■■■□□ 2.64
C2CD3-216ENST00000541922 RGS12O14924 1447 aa31.51■■■□□ 2.64
C2CD3-216ENST00000541922 PLEKHG3A1L390 1219 aa31.51■■■□□ 2.63
C2CD3-216ENST00000541922 CABP2Q9NPB3 220 aa31.51■■■□□ 2.63
C2CD3-216ENST00000541922 POLR3AO14802 1390 aaPredicted RBP31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms