RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 NBPF1Q3BBV0 1214 aa33.16■■■□□ 2.9
CLTA-210ENST00000540080 BRINP3Q76B58 766 aa33.14■■■□□ 2.9
CLTA-210ENST00000540080 DLC1Q96QB1 1528 aa33.13■■■□□ 2.89
CLTA-210ENST00000540080 TONSLQ96HA7 1378 aa33.13■■■□□ 2.89
CLTA-210ENST00000540080 KIAA1210Q9ULL0 1709 aa33.11■■■□□ 2.89
CLTA-210ENST00000540080 C1orf167Q5SNV9 1468 aa33.09■■■□□ 2.89
CLTA-210ENST00000540080 CDC42BPGQ6DT37 1551 aa33.08■■■□□ 2.89
CLTA-210ENST00000540080 NUTM2FA1L443 756 aa33.07■■■□□ 2.88
CLTA-210ENST00000540080 ORAI2Q96SN7 254 aa33.05■■■□□ 2.88
CLTA-210ENST00000540080 NBPF8Q3BBV2 869 aa33.04■■■□□ 2.88
CLTA-210ENST00000540080 PHLPP1O60346 1717 aa33.04■■■□□ 2.88
CLTA-210ENST00000540080 MINK1Q8N4C8 1332 aaPredicted RBP33.02■■■□□ 2.88
CLTA-210ENST00000540080 HIRIP3Q9BW71 556 aaPredicted RBP33.02■■■□□ 2.88
CLTA-210ENST00000540080 ESCO1Q5FWF5 840 aa33■■■□□ 2.87
CLTA-210ENST00000540080 DDX17Q92841 729 aaKnown RBP33■■■□□ 2.87
CLTA-210ENST00000540080 ARHGEF28Q8N1W1 1705 aaKnown RBP32.99■■■□□ 2.87
CLTA-210ENST00000540080 TRPM1Q7Z4N2 1603 aa32.99■■■□□ 2.87
CLTA-210ENST00000540080 CCER1Q8TC90 406 aaPredicted RBP32.98■■■□□ 2.87
CLTA-210ENST00000540080 AHDC1Q5TGY3 1603 aaPredicted RBP32.98■■■□□ 2.87
CLTA-210ENST00000540080 ROCK2O75116 1388 aaKnown RBP32.97■■■□□ 2.87
CLTA-210ENST00000540080 CLSPNQ9HAW4 1339 aa32.96■■■□□ 2.87
CLTA-210ENST00000540080 FMN2Q9NZ56 1722 aa32.95■■■□□ 2.87
CLTA-210ENST00000540080 COL16A1Q07092 1604 aaPredicted RBP32.94■■■□□ 2.86
CLTA-210ENST00000540080 NHSL1Q5SYE7 1610 aa32.91■■■□□ 2.86
CLTA-210ENST00000540080 ADGRB2O60241 1585 aa32.9■■■□□ 2.86
CLTA-210ENST00000540080 JCADQ9P266 1359 aa32.89■■■□□ 2.86
CLTA-210ENST00000540080 WASLO00401 505 aaPredicted RBP32.89■■■□□ 2.86
CLTA-210ENST00000540080 DISP3Q9P2K9 1392 aa32.87■■■□□ 2.85
CLTA-210ENST00000540080 CENPJQ9HC77 1338 aaPredicted RBP32.87■■■□□ 2.85
CLTA-210ENST00000540080 FOXO3O43524 673 aa32.87■■■□□ 2.85
CLTA-210ENST00000540080 LRRC59Q96AG4 307 aaKnown RBP32.85■■■□□ 2.85
CLTA-210ENST00000540080 MED1Q15648 1581 aaPredicted RBP32.83■■■□□ 2.85
CLTA-210ENST00000540080 CARD11Q9BXL7 1154 aa32.83■■■□□ 2.85
CLTA-210ENST00000540080 RGPD8O14715 1765 aaPredicted RBP32.83■■■□□ 2.85
CLTA-210ENST00000540080 NPHP3Q7Z494 1330 aa32.82■■■□□ 2.84
CLTA-210ENST00000540080 XPCQ01831 940 aaPredicted RBP32.82■■■□□ 2.84
CLTA-210ENST00000540080 CDK19Q9BWU1 502 aa32.82■■■□□ 2.84
CLTA-210ENST00000540080 PHF8Q9UPP1 1060 aa32.82■■■□□ 2.84
CLTA-210ENST00000540080 GPRASP1Q5JY77 1395 aa32.82■■■□□ 2.84
CLTA-210ENST00000540080 SOS2Q07890 1332 aaPredicted RBP32.81■■■□□ 2.84
CLTA-210ENST00000540080 RALGAPBQ86X10 1494 aa32.81■■■□□ 2.84
CLTA-210ENST00000540080 ANKARQ7Z5J8 1434 aa32.81■■■□□ 2.84
CLTA-210ENST00000540080 EIF3AQ14152 1382 aaKnown RBP32.81■■■□□ 2.84
CLTA-210ENST00000540080 PRR36Q9H6K5 1346 aa32.79■■■□□ 2.84
CLTA-210ENST00000540080 TIMELESSQ9UNS1 1208 aa32.79■■■□□ 2.84
CLTA-210ENST00000540080 USP32Q8NFA0 1604 aa32.79■■■□□ 2.84
CLTA-210ENST00000540080 TULP4Q9NRJ4 1543 aa32.78■■■□□ 2.84
CLTA-210ENST00000540080 PMFBP1Q8TBY8 1022 aa32.78■■■□□ 2.84
CLTA-210ENST00000540080 KIF1AQ12756 1690 aa32.75■■■□□ 2.83
CLTA-210ENST00000540080 QRICH2Q9H0J4 1663 aa32.75■■■□□ 2.83
CLTA-210ENST00000540080 NUDT16Q96DE0 195 aaKnown RBP32.75■■■□□ 2.83
CLTA-210ENST00000540080 SPATA31A6Q5VVP1 1343 aa32.74■■■□□ 2.83
CLTA-210ENST00000540080 SHPRHQ149N8 1683 aa32.73■■■□□ 2.83
CLTA-210ENST00000540080 PXDNQ92626 1479 aa32.73■■■□□ 2.83
CLTA-210ENST00000540080 NUTM2BA6NNL0 878 aaPredicted RBP32.72■■■□□ 2.83
CLTA-210ENST00000540080 NUTM2EB1AL46 878 aaPredicted RBP32.72■■■□□ 2.83
CLTA-210ENST00000540080 KRT28Q7Z3Y7 464 aa32.72■■■□□ 2.83
CLTA-210ENST00000540080 NUTM2AQ8IVF1 878 aaPredicted RBP32.72■■■□□ 2.83
CLTA-210ENST00000540080 PHF23Q9BUL5 403 aaPredicted RBP32.72■■■□□ 2.83
CLTA-210ENST00000540080 PNPLA6Q8IY17 1366 aa32.71■■■□□ 2.83
CLTA-210ENST00000540080 SRPK2P78362 688 aaKnown RBP32.71■■■□□ 2.83
CLTA-210ENST00000540080 PSME1Q06323 249 aa32.7■■■□□ 2.83
CLTA-210ENST00000540080 CABP2Q9NPB3 220 aa32.69■■■□□ 2.82
CLTA-210ENST00000540080 ATP7BP35670 1465 aa32.68■■■□□ 2.82
CLTA-210ENST00000540080 NGDNQ8NEJ9 315 aaKnown RBP32.66■■■□□ 2.82
CLTA-210ENST00000540080 CCDC61Q9Y6R9 512 aa32.65■■■□□ 2.82
CLTA-210ENST00000540080 EVC2Q86UK5 1308 aa32.65■■■□□ 2.82
CLTA-210ENST00000540080 LRP6O75581 1613 aa32.65■■■□□ 2.82
CLTA-210ENST00000540080 MEX3CQ5U5Q3 659 aaKnown RBP32.64■■■□□ 2.82
CLTA-210ENST00000540080 SPATA31A3Q5VYP0 1347 aa32.61■■■□□ 2.81
CLTA-210ENST00000540080 ITSN1Q15811 1721 aa32.6■■■□□ 2.81
CLTA-210ENST00000540080 LMOD2Q6P5Q4 547 aa32.58■■■□□ 2.81
CLTA-210ENST00000540080 PLEKHG3A1L390 1219 aa32.56■■■□□ 2.8
CLTA-210ENST00000540080 SBNO1A3KN83 1393 aa32.56■■■□□ 2.8
CLTA-210ENST00000540080 ACEP12821 1306 aa32.55■■■□□ 2.8
CLTA-210ENST00000540080 PPIP5K1Q6PFW1 1433 aa32.55■■■□□ 2.8
CLTA-210ENST00000540080 ST20-MTHFSA0A0A6YYL1 179 aa32.55■■■□□ 2.8
CLTA-210ENST00000540080 RGS17Q9UGC6 210 aaPredicted RBP32.55■■■□□ 2.8
CLTA-210ENST00000540080 TOPAZ1Q8N9V7 1692 aa32.55■■■□□ 2.8
CLTA-210ENST00000540080 TNS3Q68CZ2 1445 aa32.54■■■□□ 2.8
CLTA-210ENST00000540080 ADAMTS2O95450 1211 aa32.54■■■□□ 2.8
CLTA-210ENST00000540080 SBNO2Q9Y2G9 1366 aa32.54■■■□□ 2.8
CLTA-210ENST00000540080 PLEKHG5O94827 1062 aa32.53■■■□□ 2.8
CLTA-210ENST00000540080 CABP1Q9NZU7 370 aa32.53■■■□□ 2.8
CLTA-210ENST00000540080 COL22A1Q8NFW1 1626 aaPredicted RBP32.52■■■□□ 2.8
CLTA-210ENST00000540080 PAK3O75914 559 aaPredicted RBP32.52■■■□□ 2.8
CLTA-210ENST00000540080 ILDR2Q71H61 639 aa32.52■■■□□ 2.8
CLTA-210ENST00000540080 POLR3AO14802 1390 aaPredicted RBP32.51■■■□□ 2.79
CLTA-210ENST00000540080 USP47Q96K76 1375 aa32.5■■■□□ 2.79
CLTA-210ENST00000540080 C8orf37Q96NL8 207 aa32.48■■■□□ 2.79
CLTA-210ENST00000540080 ARHGEF10O15013 1369 aa32.47■■■□□ 2.79
CLTA-210ENST00000540080 TESK2Q96S53 571 aa32.47■■■□□ 2.79
CLTA-210ENST00000540080 TRPM3Q9HCF6 1732 aaPredicted RBP32.47■■■□□ 2.79
CLTA-210ENST00000540080 CABLES1Q8TDN4 633 aa32.46■■■□□ 2.79
CLTA-210ENST00000540080 ATAD2Q6PL18 1390 aa32.44■■■□□ 2.78
CLTA-210ENST00000540080 HAP1P54257 671 aaPredicted RBP32.43■■■□□ 2.78
CLTA-210ENST00000540080 NGLY1Q96IV0 654 aa32.43■■■□□ 2.78
CLTA-210ENST00000540080 POTEAQ6S8J7 498 aa32.42■■■□□ 2.78
CLTA-210ENST00000540080 AFF2P51816 1311 aa32.41■■■□□ 2.78
CLTA-210ENST00000540080 ZNF772Q68DY9 489 aaPredicted RBP32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms