RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 C1orf167Q5SNV9 1468 aa26.43■■□□□ 1.82
SNRPA1-203ENST00000540017 CDC42BPGQ6DT37 1551 aa26.43■■□□□ 1.82
SNRPA1-203ENST00000540017 PHLPP1O60346 1717 aa26.42■■□□□ 1.82
SNRPA1-203ENST00000540017 SAFB2Q14151 953 aaKnown RBP eCLIP26.42■■□□□ 1.82
SNRPA1-203ENST00000540017 NBPF1Q3BBV0 1214 aa26.42■■□□□ 1.82
SNRPA1-203ENST00000540017 KIAA1210Q9ULL0 1709 aa26.42■■□□□ 1.82
SNRPA1-203ENST00000540017 AHDC1Q5TGY3 1603 aaPredicted RBP26.39■■□□□ 1.82
SNRPA1-203ENST00000540017 ORAI2Q96SN7 254 aa26.39■■□□□ 1.82
SNRPA1-203ENST00000540017 COL16A1Q07092 1604 aaPredicted RBP26.39■■□□□ 1.81
SNRPA1-203ENST00000540017 POGKQ9P215 609 aa26.38■■□□□ 1.81
SNRPA1-203ENST00000540017 DDX17Q92841 729 aaKnown RBP26.37■■□□□ 1.81
SNRPA1-203ENST00000540017 NUTM2FA1L443 756 aa26.36■■□□□ 1.81
SNRPA1-203ENST00000540017 ARHGEF28Q8N1W1 1705 aaKnown RBP26.34■■□□□ 1.81
SNRPA1-203ENST00000540017 NHSL1Q5SYE7 1610 aa26.34■■□□□ 1.81
SNRPA1-203ENST00000540017 FMN2Q9NZ56 1722 aa26.34■■□□□ 1.81
SNRPA1-203ENST00000540017 MED1Q15648 1581 aaPredicted RBP26.33■■□□□ 1.8
SNRPA1-203ENST00000540017 NBPF8Q3BBV2 869 aa26.32■■□□□ 1.8
SNRPA1-203ENST00000540017 MINK1Q8N4C8 1332 aaPredicted RBP26.31■■□□□ 1.8
SNRPA1-203ENST00000540017 TRPM1Q7Z4N2 1603 aa26.31■■□□□ 1.8
SNRPA1-203ENST00000540017 DISP3Q9P2K9 1392 aa26.31■■□□□ 1.8
SNRPA1-203ENST00000540017 ESCO1Q5FWF5 840 aa26.3■■□□□ 1.8
SNRPA1-203ENST00000540017 HIRIP3Q9BW71 556 aaPredicted RBP26.3■■□□□ 1.8
SNRPA1-203ENST00000540017 TONSLQ96HA7 1378 aa26.3■■□□□ 1.8
SNRPA1-203ENST00000540017 ADGRB2O60241 1585 aa26.29■■□□□ 1.8
SNRPA1-203ENST00000540017 JCADQ9P266 1359 aa26.27■■□□□ 1.8
SNRPA1-203ENST00000540017 RGPD8O14715 1765 aaPredicted RBP26.25■■□□□ 1.79
SNRPA1-203ENST00000540017 USP32Q8NFA0 1604 aa26.23■■□□□ 1.79
SNRPA1-203ENST00000540017 SOS2Q07890 1332 aaPredicted RBP26.22■■□□□ 1.79
SNRPA1-203ENST00000540017 ROCK2O75116 1388 aaKnown RBP26.21■■□□□ 1.79
SNRPA1-203ENST00000540017 WASLO00401 505 aaPredicted RBP26.21■■□□□ 1.79
SNRPA1-203ENST00000540017 FOXO3O43524 673 aa26.21■■□□□ 1.79
SNRPA1-203ENST00000540017 SHPRHQ149N8 1683 aa26.2■■□□□ 1.78
SNRPA1-203ENST00000540017 LRRC59Q96AG4 307 aaKnown RBP26.2■■□□□ 1.78
SNRPA1-203ENST00000540017 PRR36Q9H6K5 1346 aa26.19■■□□□ 1.78
SNRPA1-203ENST00000540017 XPCQ01831 940 aaPredicted RBP26.18■■□□□ 1.78
SNRPA1-203ENST00000540017 ANKARQ7Z5J8 1434 aa26.18■■□□□ 1.78
SNRPA1-203ENST00000540017 PXDNQ92626 1479 aa26.17■■□□□ 1.78
SNRPA1-203ENST00000540017 NPHP3Q7Z494 1330 aa26.17■■□□□ 1.78
SNRPA1-203ENST00000540017 PHF8Q9UPP1 1060 aa26.17■■□□□ 1.78
SNRPA1-203ENST00000540017 GPRASP1Q5JY77 1395 aa26.17■■□□□ 1.78
SNRPA1-203ENST00000540017 CENPJQ9HC77 1338 aaPredicted RBP26.16■■□□□ 1.78
SNRPA1-203ENST00000540017 TULP4Q9NRJ4 1543 aa26.16■■□□□ 1.78
SNRPA1-203ENST00000540017 KIF1AQ12756 1690 aa26.15■■□□□ 1.78
SNRPA1-203ENST00000540017 CLSPNQ9HAW4 1339 aa26.15■■□□□ 1.78
SNRPA1-203ENST00000540017 LRP6O75581 1613 aa26.15■■□□□ 1.78
SNRPA1-203ENST00000540017 PNPLA6Q8IY17 1366 aa26.15■■□□□ 1.78
SNRPA1-203ENST00000540017 SPATA31A6Q5VVP1 1343 aa26.14■■□□□ 1.78
SNRPA1-203ENST00000540017 RALGAPBQ86X10 1494 aa26.13■■□□□ 1.77
SNRPA1-203ENST00000540017 PMFBP1Q8TBY8 1022 aa26.13■■□□□ 1.77
SNRPA1-203ENST00000540017 CDK19Q9BWU1 502 aa26.13■■□□□ 1.77
SNRPA1-203ENST00000540017 QRICH2Q9H0J4 1663 aa26.12■■□□□ 1.77
SNRPA1-203ENST00000540017 ILDR2Q71H61 639 aa26.12■■□□□ 1.77
SNRPA1-203ENST00000540017 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
SNRPA1-203ENST00000540017 ATP7BP35670 1465 aa26.11■■□□□ 1.77
SNRPA1-203ENST00000540017 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
SNRPA1-203ENST00000540017 PHF23Q9BUL5 403 aaPredicted RBP26.1■■□□□ 1.77
SNRPA1-203ENST00000540017 RGS17Q9UGC6 210 aaPredicted RBP26.1■■□□□ 1.77
SNRPA1-203ENST00000540017 NUTM2BA6NNL0 878 aaPredicted RBP26.09■■□□□ 1.77
SNRPA1-203ENST00000540017 NUTM2EB1AL46 878 aaPredicted RBP26.09■■□□□ 1.77
SNRPA1-203ENST00000540017 KRT28Q7Z3Y7 464 aa26.09■■□□□ 1.77
SNRPA1-203ENST00000540017 NUTM2AQ8IVF1 878 aaPredicted RBP26.09■■□□□ 1.77
SNRPA1-203ENST00000540017 NUDT16Q96DE0 195 aaKnown RBP26.09■■□□□ 1.77
SNRPA1-203ENST00000540017 CARD11Q9BXL7 1154 aa26.09■■□□□ 1.77
SNRPA1-203ENST00000540017 SPATA31A3Q5VYP0 1347 aa26.04■■□□□ 1.76
SNRPA1-203ENST00000540017 PSME1Q06323 249 aa26.03■■□□□ 1.76
SNRPA1-203ENST00000540017 CABP2Q9NPB3 220 aa26.03■■□□□ 1.76
SNRPA1-203ENST00000540017 COL22A1Q8NFW1 1626 aaPredicted RBP26.03■■□□□ 1.76
SNRPA1-203ENST00000540017 TIMELESSQ9UNS1 1208 aa26.02■■□□□ 1.76
SNRPA1-203ENST00000540017 TOPAZ1Q8N9V7 1692 aa26.02■■□□□ 1.76
SNRPA1-203ENST00000540017 SRPK2P78362 688 aaKnown RBP26.01■■□□□ 1.75
SNRPA1-203ENST00000540017 ITSN1Q15811 1721 aa26.01■■□□□ 1.75
SNRPA1-203ENST00000540017 MEX3CQ5U5Q3 659 aaKnown RBP26.01■■□□□ 1.75
SNRPA1-203ENST00000540017 CCDC61Q9Y6R9 512 aa26■■□□□ 1.75
SNRPA1-203ENST00000540017 NGDNQ8NEJ9 315 aaKnown RBP25.99■■□□□ 1.75
SNRPA1-203ENST00000540017 TNS3Q68CZ2 1445 aa25.98■■□□□ 1.75
SNRPA1-203ENST00000540017 SBNO1A3KN83 1393 aa25.98■■□□□ 1.75
SNRPA1-203ENST00000540017 TRPM3Q9HCF6 1732 aaPredicted RBP25.98■■□□□ 1.75
SNRPA1-203ENST00000540017 EVC2Q86UK5 1308 aa25.97■■□□□ 1.75
SNRPA1-203ENST00000540017 PLEKHG3A1L390 1219 aa25.96■■□□□ 1.75
SNRPA1-203ENST00000540017 ADAMTS2O95450 1211 aa25.96■■□□□ 1.75
SNRPA1-203ENST00000540017 POTEAQ6S8J7 498 aa25.96■■□□□ 1.75
SNRPA1-203ENST00000540017 POLR3AO14802 1390 aaPredicted RBP25.95■■□□□ 1.74
SNRPA1-203ENST00000540017 ACEP12821 1306 aa25.94■■□□□ 1.74
SNRPA1-203ENST00000540017 PPIP5K1Q6PFW1 1433 aa25.94■■□□□ 1.74
SNRPA1-203ENST00000540017 SBNO2Q9Y2G9 1366 aa25.94■■□□□ 1.74
SNRPA1-203ENST00000540017 LMOD2Q6P5Q4 547 aa25.92■■□□□ 1.74
SNRPA1-203ENST00000540017 C8orf37Q96NL8 207 aa25.91■■□□□ 1.74
SNRPA1-203ENST00000540017 CABP1Q9NZU7 370 aa25.91■■□□□ 1.74
SNRPA1-203ENST00000540017 ALS2Q96Q42 1657 aa25.9■■□□□ 1.74
SNRPA1-203ENST00000540017 ST20-MTHFSA0A0A6YYL1 179 aa25.9■■□□□ 1.74
SNRPA1-203ENST00000540017 CABLES1Q8TDN4 633 aa25.9■■□□□ 1.74
SNRPA1-203ENST00000540017 AFF2P51816 1311 aa25.89■■□□□ 1.74
SNRPA1-203ENST00000540017 PLEKHG5O94827 1062 aa25.89■■□□□ 1.74
SNRPA1-203ENST00000540017 ARHGEF10O15013 1369 aa25.89■■□□□ 1.74
SNRPA1-203ENST00000540017 TESK2Q96S53 571 aa25.88■■□□□ 1.73
SNRPA1-203ENST00000540017 PAK3O75914 559 aaPredicted RBP25.87■■□□□ 1.73
SNRPA1-203ENST00000540017 NGLY1Q96IV0 654 aa25.86■■□□□ 1.73
SNRPA1-203ENST00000540017 USP47Q96K76 1375 aa25.85■■□□□ 1.73
SNRPA1-203ENST00000540017 ZNF772Q68DY9 489 aaPredicted RBP25.84■■□□□ 1.73
SNRPA1-203ENST00000540017 ABCA3Q99758 1704 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms