RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 SAFB2Q14151 953 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRPF19-204ENST00000539960 DLC1Q96QB1 1528 aa19.21■□□□□ 0.67
PRPF19-204ENST00000539960 TIMELESSQ9UNS1 1208 aa19.21■□□□□ 0.67
PRPF19-204ENST00000539960 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
PRPF19-204ENST00000539960 MST1RQ04912 1400 aa19.2■□□□□ 0.66
PRPF19-204ENST00000539960 BRINP3Q76B58 766 aa19.19■□□□□ 0.66
PRPF19-204ENST00000539960 KIAA1210Q9ULL0 1709 aa19.19■□□□□ 0.66
PRPF19-204ENST00000539960 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
PRPF19-204ENST00000539960 C1orf167Q5SNV9 1468 aa19.16■□□□□ 0.66
PRPF19-204ENST00000539960 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
PRPF19-204ENST00000539960 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
PRPF19-204ENST00000539960 ORAI2Q96SN7 254 aa19.15■□□□□ 0.66
PRPF19-204ENST00000539960 HIRIP3Q9BW71 556 aaPredicted RBP19.15■□□□□ 0.66
PRPF19-204ENST00000539960 MINK1Q8N4C8 1332 aaPredicted RBP19.15■□□□□ 0.66
PRPF19-204ENST00000539960 ROBO1Q9Y6N7 1651 aa19.14■□□□□ 0.66
PRPF19-204ENST00000539960 ESCO1Q5FWF5 840 aa19.13■□□□□ 0.65
PRPF19-204ENST00000539960 CDC42BPGQ6DT37 1551 aa19.12■□□□□ 0.65
PRPF19-204ENST00000539960 WASLO00401 505 aaPredicted RBP19.12■□□□□ 0.65
PRPF19-204ENST00000539960 TRPM1Q7Z4N2 1603 aa19.11■□□□□ 0.65
PRPF19-204ENST00000539960 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
PRPF19-204ENST00000539960 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
PRPF19-204ENST00000539960 CENPJQ9HC77 1338 aaPredicted RBP19.1■□□□□ 0.65
PRPF19-204ENST00000539960 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
PRPF19-204ENST00000539960 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
PRPF19-204ENST00000539960 ARHGEF28Q8N1W1 1705 aaKnown RBP19.06■□□□□ 0.64
PRPF19-204ENST00000539960 RALGAPBQ86X10 1494 aa19.06■□□□□ 0.64
PRPF19-204ENST00000539960 FOXO3O43524 673 aa19.06■□□□□ 0.64
PRPF19-204ENST00000539960 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
PRPF19-204ENST00000539960 ADGRB2O60241 1585 aa19.04■□□□□ 0.64
PRPF19-204ENST00000539960 LRRC59Q96AG4 307 aaKnown RBP19.04■□□□□ 0.64
PRPF19-204ENST00000539960 EIF3AQ14152 1382 aaKnown RBP19.04■□□□□ 0.64
PRPF19-204ENST00000539960 AHDC1Q5TGY3 1603 aaPredicted RBP19.03■□□□□ 0.64
PRPF19-204ENST00000539960 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
PRPF19-204ENST00000539960 NPHP3Q7Z494 1330 aa19.03■□□□□ 0.64
PRPF19-204ENST00000539960 PRR36Q9H6K5 1346 aa19.03■□□□□ 0.64
PRPF19-204ENST00000539960 ANKARQ7Z5J8 1434 aa19.03■□□□□ 0.64
PRPF19-204ENST00000539960 NUDT16Q96DE0 195 aaKnown RBP19.03■□□□□ 0.64
PRPF19-204ENST00000539960 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
PRPF19-204ENST00000539960 PHLPP1O60346 1717 aa19.02■□□□□ 0.63
PRPF19-204ENST00000539960 JCADQ9P266 1359 aa19.01■□□□□ 0.63
PRPF19-204ENST00000539960 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
PRPF19-204ENST00000539960 SRPK2P78362 688 aaKnown RBP18.99■□□□□ 0.63
PRPF19-204ENST00000539960 XPCQ01831 940 aaPredicted RBP18.99■□□□□ 0.63
PRPF19-204ENST00000539960 KRT28Q7Z3Y7 464 aa18.99■□□□□ 0.63
PRPF19-204ENST00000539960 CCDC61Q9Y6R9 512 aa18.99■□□□□ 0.63
PRPF19-204ENST00000539960 COL16A1Q07092 1604 aaPredicted RBP18.99■□□□□ 0.63
PRPF19-204ENST00000539960 EVC2Q86UK5 1308 aa18.99■□□□□ 0.63
PRPF19-204ENST00000539960 PSME1Q06323 249 aa18.98■□□□□ 0.63
PRPF19-204ENST00000539960 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
PRPF19-204ENST00000539960 TULP4Q9NRJ4 1543 aa18.98■□□□□ 0.63
PRPF19-204ENST00000539960 NHSL1Q5SYE7 1610 aa18.97■□□□□ 0.63
PRPF19-204ENST00000539960 ST20-MTHFSA0A0A6YYL1 179 aa18.96■□□□□ 0.63
PRPF19-204ENST00000539960 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
PRPF19-204ENST00000539960 NGDNQ8NEJ9 315 aaKnown RBP18.95■□□□□ 0.62
PRPF19-204ENST00000539960 USP32Q8NFA0 1604 aa18.95■□□□□ 0.62
PRPF19-204ENST00000539960 SPATA31A6Q5VVP1 1343 aa18.95■□□□□ 0.62
PRPF19-204ENST00000539960 SBNO2Q9Y2G9 1366 aa18.94■□□□□ 0.62
PRPF19-204ENST00000539960 RGPD8O14715 1765 aaPredicted RBP18.93■□□□□ 0.62
PRPF19-204ENST00000539960 QRICH2Q9H0J4 1663 aa18.93■□□□□ 0.62
PRPF19-204ENST00000539960 ATP7BP35670 1465 aa18.93■□□□□ 0.62
PRPF19-204ENST00000539960 PXDNQ92626 1479 aa18.93■□□□□ 0.62
PRPF19-204ENST00000539960 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
PRPF19-204ENST00000539960 TESK2Q96S53 571 aa18.93■□□□□ 0.62
PRPF19-204ENST00000539960 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
PRPF19-204ENST00000539960 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
PRPF19-204ENST00000539960 SPATA31A3Q5VYP0 1347 aa18.91■□□□□ 0.62
PRPF19-204ENST00000539960 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
PRPF19-204ENST00000539960 USP47Q96K76 1375 aa18.91■□□□□ 0.62
PRPF19-204ENST00000539960 NUTM2BA6NNL0 878 aaPredicted RBP18.9■□□□□ 0.62
PRPF19-204ENST00000539960 NUTM2EB1AL46 878 aaPredicted RBP18.9■□□□□ 0.62
PRPF19-204ENST00000539960 NUTM2AQ8IVF1 878 aaPredicted RBP18.9■□□□□ 0.62
PRPF19-204ENST00000539960 ACEP12821 1306 aa18.9■□□□□ 0.62
PRPF19-204ENST00000539960 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
PRPF19-204ENST00000539960 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
PRPF19-204ENST00000539960 DISP3Q9P2K9 1392 aa18.89■□□□□ 0.61
PRPF19-204ENST00000539960 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
PRPF19-204ENST00000539960 PPIP5K1Q6PFW1 1433 aa18.87■□□□□ 0.61
PRPF19-204ENST00000539960 MED1Q15648 1581 aaPredicted RBP18.86■□□□□ 0.61
PRPF19-204ENST00000539960 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
PRPF19-204ENST00000539960 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
PRPF19-204ENST00000539960 ATAD2Q6PL18 1390 aa18.85■□□□□ 0.61
PRPF19-204ENST00000539960 PAK3O75914 559 aaPredicted RBP18.85■□□□□ 0.61
PRPF19-204ENST00000539960 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
PRPF19-204ENST00000539960 MEX3CQ5U5Q3 659 aaKnown RBP18.84■□□□□ 0.61
PRPF19-204ENST00000539960 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.61
PRPF19-204ENST00000539960 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
PRPF19-204ENST00000539960 TMF1P82094 1093 aa18.83■□□□□ 0.6
PRPF19-204ENST00000539960 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
PRPF19-204ENST00000539960 ITSN1Q15811 1721 aa18.82■□□□□ 0.6
PRPF19-204ENST00000539960 LRP6O75581 1613 aa18.82■□□□□ 0.6
PRPF19-204ENST00000539960 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
PRPF19-204ENST00000539960 ADAMTS2O95450 1211 aa18.81■□□□□ 0.6
PRPF19-204ENST00000539960 TMC1Q8TDI8 760 aa18.81■□□□□ 0.6
PRPF19-204ENST00000539960 SLC12A5Q9H2X9 1139 aa18.81■□□□□ 0.6
PRPF19-204ENST00000539960 RGS17Q9UGC6 210 aaPredicted RBP18.81■□□□□ 0.6
PRPF19-204ENST00000539960 TOPAZ1Q8N9V7 1692 aa18.8■□□□□ 0.6
PRPF19-204ENST00000539960 HSPA5P11021 654 aaKnown RBP18.8■□□□□ 0.6
PRPF19-204ENST00000539960 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
PRPF19-204ENST00000539960 CABLES1Q8TDN4 633 aa18.79■□□□□ 0.6
PRPF19-204ENST00000539960 PLEKHG5O94827 1062 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms