RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 DLC1Q96QB1 1528 aa13□□□□□ -0.33
LRTOMT-216ENST00000539271 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
LRTOMT-216ENST00000539271 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
LRTOMT-216ENST00000539271 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
LRTOMT-216ENST00000539271 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
LRTOMT-216ENST00000539271 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
LRTOMT-216ENST00000539271 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
LRTOMT-216ENST00000539271 PHLPP1O60346 1717 aa12.97□□□□□ -0.33
LRTOMT-216ENST00000539271 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
LRTOMT-216ENST00000539271 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
LRTOMT-216ENST00000539271 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
LRTOMT-216ENST00000539271 PRAM1Q96QH2 718 aa12.96□□□□□ -0.33
LRTOMT-216ENST00000539271 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
LRTOMT-216ENST00000539271 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
LRTOMT-216ENST00000539271 ARHGEF28Q8N1W1 1705 aaKnown RBP12.94□□□□□ -0.34
LRTOMT-216ENST00000539271 POGKQ9P215 609 aa12.94□□□□□ -0.34
LRTOMT-216ENST00000539271 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
LRTOMT-216ENST00000539271 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
LRTOMT-216ENST00000539271 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
LRTOMT-216ENST00000539271 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
LRTOMT-216ENST00000539271 ADGRB2O60241 1585 aa12.92□□□□□ -0.34
LRTOMT-216ENST00000539271 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
LRTOMT-216ENST00000539271 ORAI2Q96SN7 254 aa12.91□□□□□ -0.34
LRTOMT-216ENST00000539271 TONSLQ96HA7 1378 aa12.91□□□□□ -0.34
LRTOMT-216ENST00000539271 JCADQ9P266 1359 aa12.9□□□□□ -0.34
LRTOMT-216ENST00000539271 RGPD8O14715 1765 aaPredicted RBP12.89□□□□□ -0.35
LRTOMT-216ENST00000539271 DDX17Q92841 729 aaKnown RBP12.89□□□□□ -0.35
LRTOMT-216ENST00000539271 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
LRTOMT-216ENST00000539271 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
LRTOMT-216ENST00000539271 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
LRTOMT-216ENST00000539271 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
LRTOMT-216ENST00000539271 SHPRHQ149N8 1683 aa12.88□□□□□ -0.35
LRTOMT-216ENST00000539271 CLSPNQ9HAW4 1339 aa12.88□□□□□ -0.35
LRTOMT-216ENST00000539271 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
LRTOMT-216ENST00000539271 USP32Q8NFA0 1604 aa12.87□□□□□ -0.35
LRTOMT-216ENST00000539271 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
LRTOMT-216ENST00000539271 SOS2Q07890 1332 aaPredicted RBP12.87□□□□□ -0.35
LRTOMT-216ENST00000539271 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
LRTOMT-216ENST00000539271 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
LRTOMT-216ENST00000539271 GPRASP1Q5JY77 1395 aa12.86□□□□□ -0.35
LRTOMT-216ENST00000539271 EIF3AQ14152 1382 aaKnown RBP12.85□□□□□ -0.35
LRTOMT-216ENST00000539271 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
LRTOMT-216ENST00000539271 WASLO00401 505 aaPredicted RBP12.85□□□□□ -0.35
LRTOMT-216ENST00000539271 LRRC59Q96AG4 307 aaKnown RBP12.85□□□□□ -0.35
LRTOMT-216ENST00000539271 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
LRTOMT-216ENST00000539271 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
LRTOMT-216ENST00000539271 PXDNQ92626 1479 aa12.85□□□□□ -0.35
LRTOMT-216ENST00000539271 SPATA31A6Q5VVP1 1343 aa12.84□□□□□ -0.35
LRTOMT-216ENST00000539271 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
LRTOMT-216ENST00000539271 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.35
LRTOMT-216ENST00000539271 FOXO3O43524 673 aa12.83□□□□□ -0.36
LRTOMT-216ENST00000539271 RGS17Q9UGC6 210 aaPredicted RBP12.83□□□□□ -0.36
LRTOMT-216ENST00000539271 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
LRTOMT-216ENST00000539271 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
LRTOMT-216ENST00000539271 PNPLA6Q8IY17 1366 aa12.82□□□□□ -0.36
LRTOMT-216ENST00000539271 LRP6O75581 1613 aa12.81□□□□□ -0.36
LRTOMT-216ENST00000539271 ATP7BP35670 1465 aa12.81□□□□□ -0.36
LRTOMT-216ENST00000539271 CDK19Q9BWU1 502 aa12.81□□□□□ -0.36
LRTOMT-216ENST00000539271 ITSN1Q15811 1721 aa12.81□□□□□ -0.36
LRTOMT-216ENST00000539271 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
LRTOMT-216ENST00000539271 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
LRTOMT-216ENST00000539271 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
LRTOMT-216ENST00000539271 CARD11Q9BXL7 1154 aa12.79□□□□□ -0.36
LRTOMT-216ENST00000539271 COL22A1Q8NFW1 1626 aaPredicted RBP12.79□□□□□ -0.36
LRTOMT-216ENST00000539271 TOPAZ1Q8N9V7 1692 aa12.79□□□□□ -0.36
LRTOMT-216ENST00000539271 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
LRTOMT-216ENST00000539271 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
LRTOMT-216ENST00000539271 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
LRTOMT-216ENST00000539271 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
LRTOMT-216ENST00000539271 SPATA31A3Q5VYP0 1347 aa12.77□□□□□ -0.37
LRTOMT-216ENST00000539271 SBNO1A3KN83 1393 aa12.77□□□□□ -0.37
LRTOMT-216ENST00000539271 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 PSME1Q06323 249 aa12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 POTEAQ6S8J7 498 aa12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 SBNO2Q9Y2G9 1366 aa12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
LRTOMT-216ENST00000539271 SRPK2P78362 688 aaKnown RBP12.75□□□□□ -0.37
LRTOMT-216ENST00000539271 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
LRTOMT-216ENST00000539271 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
LRTOMT-216ENST00000539271 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
LRTOMT-216ENST00000539271 NGDNQ8NEJ9 315 aaKnown RBP12.74□□□□□ -0.37
LRTOMT-216ENST00000539271 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
LRTOMT-216ENST00000539271 POLR3AO14802 1390 aaPredicted RBP12.73□□□□□ -0.37
LRTOMT-216ENST00000539271 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
LRTOMT-216ENST00000539271 PPIP5K1Q6PFW1 1433 aa12.72□□□□□ -0.37
LRTOMT-216ENST00000539271 ARHGEF10O15013 1369 aa12.72□□□□□ -0.37
LRTOMT-216ENST00000539271 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.37
LRTOMT-216ENST00000539271 ACEP12821 1306 aa12.71□□□□□ -0.37
LRTOMT-216ENST00000539271 ADAMTS2O95450 1211 aa12.71□□□□□ -0.37
LRTOMT-216ENST00000539271 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
LRTOMT-216ENST00000539271 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
LRTOMT-216ENST00000539271 AFF2P51816 1311 aa12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 ST20-MTHFSA0A0A6YYL1 179 aa12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms