RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 SIRT1Q96EB6 747 aa19.39■□□□□ 0.69
C2CD3-211ENST00000538361 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
C2CD3-211ENST00000538361 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
C2CD3-211ENST00000538361 SHPRHQ149N8 1683 aa19.37■□□□□ 0.69
C2CD3-211ENST00000538361 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
C2CD3-211ENST00000538361 ORAI2Q96SN7 254 aa19.35■□□□□ 0.69
C2CD3-211ENST00000538361 RGS17Q9UGC6 210 aaPredicted RBP19.34■□□□□ 0.69
C2CD3-211ENST00000538361 PLEKHH1Q9ULM0 1364 aa19.33■□□□□ 0.69
C2CD3-211ENST00000538361 MEX3CQ5U5Q3 659 aaKnown RBP19.33■□□□□ 0.68
C2CD3-211ENST00000538361 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
C2CD3-211ENST00000538361 DDX17Q92841 729 aaKnown RBP19.32■□□□□ 0.68
C2CD3-211ENST00000538361 PRAM1Q96QH2 718 aa19.3■□□□□ 0.68
C2CD3-211ENST00000538361 POGKQ9P215 609 aa19.3■□□□□ 0.68
C2CD3-211ENST00000538361 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
C2CD3-211ENST00000538361 SOS2Q07890 1332 aaPredicted RBP19.29■□□□□ 0.68
C2CD3-211ENST00000538361 NUTM2BA6NNL0 878 aaPredicted RBP19.29■□□□□ 0.68
C2CD3-211ENST00000538361 NUTM2EB1AL46 878 aaPredicted RBP19.29■□□□□ 0.68
C2CD3-211ENST00000538361 NUTM2AQ8IVF1 878 aaPredicted RBP19.29■□□□□ 0.68
C2CD3-211ENST00000538361 NPHP3Q7Z494 1330 aa19.28■□□□□ 0.68
C2CD3-211ENST00000538361 ADGRB1O14514 1584 aa19.28■□□□□ 0.68
C2CD3-211ENST00000538361 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
C2CD3-211ENST00000538361 LRP6O75581 1613 aa19.28■□□□□ 0.68
C2CD3-211ENST00000538361 FMN2Q9NZ56 1722 aa19.28■□□□□ 0.68
C2CD3-211ENST00000538361 TRAK1Q9UPV9 953 aa19.27■□□□□ 0.68
C2CD3-211ENST00000538361 SAFB2Q14151 953 aaKnown RBP eCLIP19.26■□□□□ 0.67
C2CD3-211ENST00000538361 PNPLA6Q8IY17 1366 aa19.26■□□□□ 0.67
C2CD3-211ENST00000538361 ZNF772Q68DY9 489 aaPredicted RBP19.25■□□□□ 0.67
C2CD3-211ENST00000538361 POTEAQ6S8J7 498 aa19.25■□□□□ 0.67
C2CD3-211ENST00000538361 FOXO3O43524 673 aa19.24■□□□□ 0.67
C2CD3-211ENST00000538361 KIF1AQ12756 1690 aa19.23■□□□□ 0.67
C2CD3-211ENST00000538361 KIAA1210Q9ULL0 1709 aa19.21■□□□□ 0.67
C2CD3-211ENST00000538361 RGPD8O14715 1765 aaPredicted RBP19.21■□□□□ 0.67
C2CD3-211ENST00000538361 PXDNQ92626 1479 aa19.2■□□□□ 0.66
C2CD3-211ENST00000538361 ADGRB2O60241 1585 aa19.19■□□□□ 0.66
C2CD3-211ENST00000538361 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
C2CD3-211ENST00000538361 EIF3AQ14152 1382 aaKnown RBP19.19■□□□□ 0.66
C2CD3-211ENST00000538361 XPCQ01831 940 aaPredicted RBP19.18■□□□□ 0.66
C2CD3-211ENST00000538361 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
C2CD3-211ENST00000538361 HIRIP3Q9BW71 556 aaPredicted RBP19.18■□□□□ 0.66
C2CD3-211ENST00000538361 MINK1Q8N4C8 1332 aaPredicted RBP19.18■□□□□ 0.66
C2CD3-211ENST00000538361 PSME1Q06323 249 aa19.17■□□□□ 0.66
C2CD3-211ENST00000538361 C8orf37Q96NL8 207 aa19.17■□□□□ 0.66
C2CD3-211ENST00000538361 AFF2P51816 1311 aa19.17■□□□□ 0.66
C2CD3-211ENST00000538361 COL22A1Q8NFW1 1626 aaPredicted RBP19.17■□□□□ 0.66
C2CD3-211ENST00000538361 ARHGEF28Q8N1W1 1705 aaKnown RBP19.17■□□□□ 0.66
C2CD3-211ENST00000538361 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
C2CD3-211ENST00000538361 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
C2CD3-211ENST00000538361 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
C2CD3-211ENST00000538361 WASLO00401 505 aaPredicted RBP19.15■□□□□ 0.66
C2CD3-211ENST00000538361 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
C2CD3-211ENST00000538361 L3MBTL2Q969R5 705 aa19.15■□□□□ 0.66
C2CD3-211ENST00000538361 NGLY1Q96IV0 654 aa19.15■□□□□ 0.66
C2CD3-211ENST00000538361 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
C2CD3-211ENST00000538361 SPATA31A3Q5VYP0 1347 aa19.13■□□□□ 0.65
C2CD3-211ENST00000538361 USP32Q8NFA0 1604 aa19.12■□□□□ 0.65
C2CD3-211ENST00000538361 RXRBP28702 533 aa19.12■□□□□ 0.65
C2CD3-211ENST00000538361 NBPF1Q3BBV0 1214 aa19.12■□□□□ 0.65
C2CD3-211ENST00000538361 TULP4Q9NRJ4 1543 aa19.11■□□□□ 0.65
C2CD3-211ENST00000538361 PMFBP1Q8TBY8 1022 aa19.11■□□□□ 0.65
C2CD3-211ENST00000538361 SBNO1A3KN83 1393 aa19.09■□□□□ 0.65
C2CD3-211ENST00000538361 QTRT2Q9H974 415 aaKnown RBP19.09■□□□□ 0.65
C2CD3-211ENST00000538361 TNS3Q68CZ2 1445 aa19.08■□□□□ 0.64
C2CD3-211ENST00000538361 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
C2CD3-211ENST00000538361 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
C2CD3-211ENST00000538361 FNBP4Q8N3X1 1017 aaPredicted RBP19.07■□□□□ 0.64
C2CD3-211ENST00000538361 USP21Q9UK80 565 aa19.07■□□□□ 0.64
C2CD3-211ENST00000538361 ITSN1Q15811 1721 aa19.07■□□□□ 0.64
C2CD3-211ENST00000538361 MARF1Q9Y4F3 1742 aaKnown RBP19.07■□□□□ 0.64
C2CD3-211ENST00000538361 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
C2CD3-211ENST00000538361 LMOD2Q6P5Q4 547 aa19.06■□□□□ 0.64
C2CD3-211ENST00000538361 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
C2CD3-211ENST00000538361 NUDT16Q96DE0 195 aaKnown RBP19.06■□□□□ 0.64
C2CD3-211ENST00000538361 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
C2CD3-211ENST00000538361 CENPJQ9HC77 1338 aaPredicted RBP19.05■□□□□ 0.64
C2CD3-211ENST00000538361 HAP1P54257 671 aaPredicted RBP19.05■□□□□ 0.64
C2CD3-211ENST00000538361 RBM6P78332 1123 aaKnown RBP19.05■□□□□ 0.64
C2CD3-211ENST00000538361 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
C2CD3-211ENST00000538361 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
C2CD3-211ENST00000538361 TRPC5Q9UL62 973 aaPredicted RBP19.03■□□□□ 0.64
C2CD3-211ENST00000538361 ATP7BP35670 1465 aa19.03■□□□□ 0.64
C2CD3-211ENST00000538361 CCDC61Q9Y6R9 512 aa19.02■□□□□ 0.64
C2CD3-211ENST00000538361 ROCK2O75116 1388 aaKnown RBP19.01■□□□□ 0.63
C2CD3-211ENST00000538361 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
C2CD3-211ENST00000538361 TONSLQ96HA7 1378 aa19■□□□□ 0.63
C2CD3-211ENST00000538361 QRICH2Q9H0J4 1663 aa18.99■□□□□ 0.63
C2CD3-211ENST00000538361 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
C2CD3-211ENST00000538361 SRPK2P78362 688 aaKnown RBP18.99■□□□□ 0.63
C2CD3-211ENST00000538361 CABLES1Q8TDN4 633 aa18.99■□□□□ 0.63
C2CD3-211ENST00000538361 PLEKHG5O94827 1062 aa18.98■□□□□ 0.63
C2CD3-211ENST00000538361 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
C2CD3-211ENST00000538361 ALS2Q96Q42 1657 aa18.97■□□□□ 0.63
C2CD3-211ENST00000538361 TOPAZ1Q8N9V7 1692 aa18.96■□□□□ 0.63
C2CD3-211ENST00000538361 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
C2CD3-211ENST00000538361 ATRNO75882 1429 aa18.96■□□□□ 0.63
C2CD3-211ENST00000538361 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
C2CD3-211ENST00000538361 ABCA3Q99758 1704 aa18.95■□□□□ 0.62
C2CD3-211ENST00000538361 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.95■□□□□ 0.62
C2CD3-211ENST00000538361 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
C2CD3-211ENST00000538361 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
C2CD3-211ENST00000538361 ACEP12821 1306 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms