RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, human

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTA-209	ENST00000538225	NBPF1	Q3BBV0	1214 aa		33.16	■■■□□ 2.9
CLTA-209	ENST00000538225	BRINP3	Q76B58	766 aa		33.14	■■■□□ 2.9
CLTA-209	ENST00000538225	DLC1	Q96QB1	1528 aa		33.13	■■■□□ 2.89
CLTA-209	ENST00000538225	TONSL	Q96HA7	1378 aa		33.13	■■■□□ 2.89
CLTA-209	ENST00000538225	KIAA1210	Q9ULL0	1709 aa		33.11	■■■□□ 2.89
CLTA-209	ENST00000538225	C1orf167	Q5SNV9	1468 aa		33.09	■■■□□ 2.89
CLTA-209	ENST00000538225	CDC42BPG	Q6DT37	1551 aa		33.08	■■■□□ 2.89
CLTA-209	ENST00000538225	NUTM2F	A1L443	756 aa		33.07	■■■□□ 2.88
CLTA-209	ENST00000538225	ORAI2	Q96SN7	254 aa		33.05	■■■□□ 2.88
CLTA-209	ENST00000538225	NBPF8	Q3BBV2	869 aa		33.04	■■■□□ 2.88
CLTA-209	ENST00000538225	PHLPP1	O60346	1717 aa		33.04	■■■□□ 2.88
CLTA-209	ENST00000538225	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.02	■■■□□ 2.88
CLTA-209	ENST00000538225	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.02	■■■□□ 2.88
CLTA-209	ENST00000538225	ESCO1	Q5FWF5	840 aa		33	■■■□□ 2.87
CLTA-209	ENST00000538225	DDX17	Q92841	729 aa	Known RBP	33	■■■□□ 2.87
CLTA-209	ENST00000538225	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.99	■■■□□ 2.87
CLTA-209	ENST00000538225	TRPM1	Q7Z4N2	1603 aa		32.99	■■■□□ 2.87
CLTA-209	ENST00000538225	CCER1	Q8TC90	406 aa	Predicted RBP	32.98	■■■□□ 2.87
CLTA-209	ENST00000538225	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.98	■■■□□ 2.87
CLTA-209	ENST00000538225	ROCK2	O75116	1388 aa	Known RBP	32.97	■■■□□ 2.87
CLTA-209	ENST00000538225	CLSPN	Q9HAW4	1339 aa		32.96	■■■□□ 2.87
CLTA-209	ENST00000538225	FMN2	Q9NZ56	1722 aa		32.95	■■■□□ 2.87
CLTA-209	ENST00000538225	COL16A1	Q07092	1604 aa	Predicted RBP	32.94	■■■□□ 2.86
CLTA-209	ENST00000538225	NHSL1	Q5SYE7	1610 aa		32.91	■■■□□ 2.86
CLTA-209	ENST00000538225	ADGRB2	O60241	1585 aa		32.9	■■■□□ 2.86
CLTA-209	ENST00000538225	JCAD	Q9P266	1359 aa		32.89	■■■□□ 2.86
CLTA-209	ENST00000538225	WASL	O00401	505 aa	Predicted RBP	32.89	■■■□□ 2.86
CLTA-209	ENST00000538225	DISP3	Q9P2K9	1392 aa		32.87	■■■□□ 2.85
CLTA-209	ENST00000538225	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.87	■■■□□ 2.85
CLTA-209	ENST00000538225	FOXO3	O43524	673 aa		32.87	■■■□□ 2.85
CLTA-209	ENST00000538225	LRRC59	Q96AG4	307 aa	Known RBP	32.85	■■■□□ 2.85
CLTA-209	ENST00000538225	MED1	Q15648	1581 aa	Predicted RBP	32.83	■■■□□ 2.85
CLTA-209	ENST00000538225	CARD11	Q9BXL7	1154 aa		32.83	■■■□□ 2.85
CLTA-209	ENST00000538225	RGPD8	O14715	1765 aa	Predicted RBP	32.83	■■■□□ 2.85
CLTA-209	ENST00000538225	NPHP3	Q7Z494	1330 aa		32.82	■■■□□ 2.84
CLTA-209	ENST00000538225	XPC	Q01831	940 aa	Predicted RBP	32.82	■■■□□ 2.84
CLTA-209	ENST00000538225	CDK19	Q9BWU1	502 aa		32.82	■■■□□ 2.84
CLTA-209	ENST00000538225	PHF8	Q9UPP1	1060 aa		32.82	■■■□□ 2.84
CLTA-209	ENST00000538225	GPRASP1	Q5JY77	1395 aa		32.82	■■■□□ 2.84
CLTA-209	ENST00000538225	SOS2	Q07890	1332 aa	Predicted RBP	32.81	■■■□□ 2.84
CLTA-209	ENST00000538225	RALGAPB	Q86X10	1494 aa		32.81	■■■□□ 2.84
CLTA-209	ENST00000538225	ANKAR	Q7Z5J8	1434 aa		32.81	■■■□□ 2.84
CLTA-209	ENST00000538225	EIF3A	Q14152	1382 aa	Known RBP	32.81	■■■□□ 2.84
CLTA-209	ENST00000538225	PRR36	Q9H6K5	1346 aa		32.79	■■■□□ 2.84
CLTA-209	ENST00000538225	TIMELESS	Q9UNS1	1208 aa		32.79	■■■□□ 2.84
CLTA-209	ENST00000538225	USP32	Q8NFA0	1604 aa		32.79	■■■□□ 2.84
CLTA-209	ENST00000538225	TULP4	Q9NRJ4	1543 aa		32.78	■■■□□ 2.84
CLTA-209	ENST00000538225	PMFBP1	Q8TBY8	1022 aa		32.78	■■■□□ 2.84
CLTA-209	ENST00000538225	KIF1A	Q12756	1690 aa		32.75	■■■□□ 2.83
CLTA-209	ENST00000538225	QRICH2	Q9H0J4	1663 aa		32.75	■■■□□ 2.83
CLTA-209	ENST00000538225	NUDT16	Q96DE0	195 aa	Known RBP	32.75	■■■□□ 2.83
CLTA-209	ENST00000538225	SPATA31A6	Q5VVP1	1343 aa		32.74	■■■□□ 2.83
CLTA-209	ENST00000538225	SHPRH	Q149N8	1683 aa		32.73	■■■□□ 2.83
CLTA-209	ENST00000538225	PXDN	Q92626	1479 aa		32.73	■■■□□ 2.83
CLTA-209	ENST00000538225	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.72	■■■□□ 2.83
CLTA-209	ENST00000538225	NUTM2E	B1AL46	878 aa	Predicted RBP	32.72	■■■□□ 2.83
CLTA-209	ENST00000538225	KRT28	Q7Z3Y7	464 aa		32.72	■■■□□ 2.83
CLTA-209	ENST00000538225	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.72	■■■□□ 2.83
CLTA-209	ENST00000538225	PHF23	Q9BUL5	403 aa	Predicted RBP	32.72	■■■□□ 2.83
CLTA-209	ENST00000538225	PNPLA6	Q8IY17	1366 aa		32.71	■■■□□ 2.83
CLTA-209	ENST00000538225	SRPK2	P78362	688 aa	Known RBP	32.71	■■■□□ 2.83
CLTA-209	ENST00000538225	PSME1	Q06323	249 aa		32.7	■■■□□ 2.83
CLTA-209	ENST00000538225	CABP2	Q9NPB3	220 aa		32.69	■■■□□ 2.82
CLTA-209	ENST00000538225	ATP7B	P35670	1465 aa		32.68	■■■□□ 2.82
CLTA-209	ENST00000538225	NGDN	Q8NEJ9	315 aa	Known RBP	32.66	■■■□□ 2.82
CLTA-209	ENST00000538225	CCDC61	Q9Y6R9	512 aa		32.65	■■■□□ 2.82
CLTA-209	ENST00000538225	EVC2	Q86UK5	1308 aa		32.65	■■■□□ 2.82
CLTA-209	ENST00000538225	LRP6	O75581	1613 aa		32.65	■■■□□ 2.82
CLTA-209	ENST00000538225	MEX3C	Q5U5Q3	659 aa	Known RBP	32.64	■■■□□ 2.82
CLTA-209	ENST00000538225	SPATA31A3	Q5VYP0	1347 aa		32.61	■■■□□ 2.81
CLTA-209	ENST00000538225	ITSN1	Q15811	1721 aa		32.6	■■■□□ 2.81
CLTA-209	ENST00000538225	LMOD2	Q6P5Q4	547 aa		32.58	■■■□□ 2.81
CLTA-209	ENST00000538225	PLEKHG3	A1L390	1219 aa		32.56	■■■□□ 2.8
CLTA-209	ENST00000538225	SBNO1	A3KN83	1393 aa		32.56	■■■□□ 2.8
CLTA-209	ENST00000538225	ACE	P12821	1306 aa		32.55	■■■□□ 2.8
CLTA-209	ENST00000538225	PPIP5K1	Q6PFW1	1433 aa		32.55	■■■□□ 2.8
CLTA-209	ENST00000538225	ST20-MTHFS	A0A0A6YYL1	179 aa		32.55	■■■□□ 2.8
CLTA-209	ENST00000538225	RGS17	Q9UGC6	210 aa	Predicted RBP	32.55	■■■□□ 2.8
CLTA-209	ENST00000538225	TOPAZ1	Q8N9V7	1692 aa		32.55	■■■□□ 2.8
CLTA-209	ENST00000538225	TNS3	Q68CZ2	1445 aa		32.54	■■■□□ 2.8
CLTA-209	ENST00000538225	ADAMTS2	O95450	1211 aa		32.54	■■■□□ 2.8
CLTA-209	ENST00000538225	SBNO2	Q9Y2G9	1366 aa		32.54	■■■□□ 2.8
CLTA-209	ENST00000538225	PLEKHG5	O94827	1062 aa		32.53	■■■□□ 2.8
CLTA-209	ENST00000538225	CABP1	Q9NZU7	370 aa		32.53	■■■□□ 2.8
CLTA-209	ENST00000538225	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.52	■■■□□ 2.8
CLTA-209	ENST00000538225	PAK3	O75914	559 aa	Predicted RBP	32.52	■■■□□ 2.8
CLTA-209	ENST00000538225	ILDR2	Q71H61	639 aa		32.52	■■■□□ 2.8
CLTA-209	ENST00000538225	POLR3A	O14802	1390 aa	Predicted RBP	32.51	■■■□□ 2.79
CLTA-209	ENST00000538225	USP47	Q96K76	1375 aa		32.5	■■■□□ 2.79
CLTA-209	ENST00000538225	C8orf37	Q96NL8	207 aa		32.48	■■■□□ 2.79
CLTA-209	ENST00000538225	ARHGEF10	O15013	1369 aa		32.47	■■■□□ 2.79
CLTA-209	ENST00000538225	TESK2	Q96S53	571 aa		32.47	■■■□□ 2.79
CLTA-209	ENST00000538225	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.47	■■■□□ 2.79
CLTA-209	ENST00000538225	CABLES1	Q8TDN4	633 aa		32.46	■■■□□ 2.79
CLTA-209	ENST00000538225	ATAD2	Q6PL18	1390 aa		32.44	■■■□□ 2.78
CLTA-209	ENST00000538225	HAP1	P54257	671 aa	Predicted RBP	32.43	■■■□□ 2.78
CLTA-209	ENST00000538225	NGLY1	Q96IV0	654 aa		32.43	■■■□□ 2.78
CLTA-209	ENST00000538225	POTEA	Q6S8J7	498 aa		32.42	■■■□□ 2.78
CLTA-209	ENST00000538225	AFF2	P51816	1311 aa		32.41	■■■□□ 2.78
CLTA-209	ENST00000538225	ZNF772	Q68DY9	489 aa	Predicted RBP	32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms