RNA–Protein interactions for RNA: ENST00000538045.5

MSRB3-207, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-207ENST00000538045 MED1Q15648 1581 aaPredicted RBP19.08■□□□□ 0.65
MSRB3-207ENST00000538045 L3MBTL2Q969R5 705 aa19.08■□□□□ 0.64
MSRB3-207ENST00000538045 PRAM1Q96QH2 718 aa19.08■□□□□ 0.64
MSRB3-207ENST00000538045 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
MSRB3-207ENST00000538045 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
MSRB3-207ENST00000538045 DLC1Q96QB1 1528 aa19.07■□□□□ 0.64
MSRB3-207ENST00000538045 POGKQ9P215 609 aa19.07■□□□□ 0.64
MSRB3-207ENST00000538045 SAFB2Q14151 953 aaKnown RBP eCLIP19.06■□□□□ 0.64
MSRB3-207ENST00000538045 ORAI2Q96SN7 254 aa19.06■□□□□ 0.64
MSRB3-207ENST00000538045 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
MSRB3-207ENST00000538045 NHSL1Q5SYE7 1610 aa19.05■□□□□ 0.64
MSRB3-207ENST00000538045 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
MSRB3-207ENST00000538045 DDX17Q92841 729 aaKnown RBP19.04■□□□□ 0.64
MSRB3-207ENST00000538045 JCADQ9P266 1359 aa19.04■□□□□ 0.64
MSRB3-207ENST00000538045 NBPF1Q3BBV0 1214 aa19.02■□□□□ 0.64
MSRB3-207ENST00000538045 ESCO1Q5FWF5 840 aa19.02■□□□□ 0.64
MSRB3-207ENST00000538045 FMN2Q9NZ56 1722 aa19.02■□□□□ 0.63
MSRB3-207ENST00000538045 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
MSRB3-207ENST00000538045 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
MSRB3-207ENST00000538045 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
MSRB3-207ENST00000538045 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
MSRB3-207ENST00000538045 PCGF6Q9BYE7 350 aa18.99■□□□□ 0.63
MSRB3-207ENST00000538045 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
MSRB3-207ENST00000538045 MINK1Q8N4C8 1332 aaPredicted RBP18.98■□□□□ 0.63
MSRB3-207ENST00000538045 ILDR2Q71H61 639 aa18.97■□□□□ 0.63
MSRB3-207ENST00000538045 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
MSRB3-207ENST00000538045 SOS2Q07890 1332 aaPredicted RBP18.96■□□□□ 0.63
MSRB3-207ENST00000538045 SPATA31A6Q5VVP1 1343 aa18.96■□□□□ 0.63
MSRB3-207ENST00000538045 FOXO3O43524 673 aa18.95■□□□□ 0.62
MSRB3-207ENST00000538045 ADGRB2O60241 1585 aa18.94■□□□□ 0.62
MSRB3-207ENST00000538045 NPHP3Q7Z494 1330 aa18.94■□□□□ 0.62
MSRB3-207ENST00000538045 TRPM1Q7Z4N2 1603 aa18.93■□□□□ 0.62
MSRB3-207ENST00000538045 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
MSRB3-207ENST00000538045 WASLO00401 505 aaPredicted RBP18.92■□□□□ 0.62
MSRB3-207ENST00000538045 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
MSRB3-207ENST00000538045 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
MSRB3-207ENST00000538045 NBPF8Q3BBV2 869 aa18.91■□□□□ 0.62
MSRB3-207ENST00000538045 USP32Q8NFA0 1604 aa18.91■□□□□ 0.62
MSRB3-207ENST00000538045 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
MSRB3-207ENST00000538045 PNPLA6Q8IY17 1366 aa18.91■□□□□ 0.62
MSRB3-207ENST00000538045 NUTM2BA6NNL0 878 aaPredicted RBP18.9■□□□□ 0.62
MSRB3-207ENST00000538045 NUTM2EB1AL46 878 aaPredicted RBP18.9■□□□□ 0.62
MSRB3-207ENST00000538045 NUTM2AQ8IVF1 878 aaPredicted RBP18.9■□□□□ 0.62
MSRB3-207ENST00000538045 RGS17Q9UGC6 210 aaPredicted RBP18.9■□□□□ 0.62
MSRB3-207ENST00000538045 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
MSRB3-207ENST00000538045 LRP6O75581 1613 aa18.89■□□□□ 0.62
MSRB3-207ENST00000538045 PXDNQ92626 1479 aa18.89■□□□□ 0.61
MSRB3-207ENST00000538045 MEX3CQ5U5Q3 659 aaKnown RBP18.88■□□□□ 0.61
MSRB3-207ENST00000538045 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
MSRB3-207ENST00000538045 EIF3AQ14152 1382 aaKnown RBP18.88■□□□□ 0.61
MSRB3-207ENST00000538045 KRT28Q7Z3Y7 464 aa18.87■□□□□ 0.61
MSRB3-207ENST00000538045 PMFBP1Q8TBY8 1022 aa18.87■□□□□ 0.61
MSRB3-207ENST00000538045 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
MSRB3-207ENST00000538045 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
MSRB3-207ENST00000538045 CENPJQ9HC77 1338 aaPredicted RBP18.87■□□□□ 0.61
MSRB3-207ENST00000538045 TULP4Q9NRJ4 1543 aa18.87■□□□□ 0.61
MSRB3-207ENST00000538045 PSME1Q06323 249 aa18.84■□□□□ 0.61
MSRB3-207ENST00000538045 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
MSRB3-207ENST00000538045 QRICH2Q9H0J4 1663 aa18.83■□□□□ 0.61
MSRB3-207ENST00000538045 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
MSRB3-207ENST00000538045 SPATA31A3Q5VYP0 1347 aa18.82■□□□□ 0.6
MSRB3-207ENST00000538045 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
MSRB3-207ENST00000538045 ITSN1Q15811 1721 aa18.82■□□□□ 0.6
MSRB3-207ENST00000538045 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
MSRB3-207ENST00000538045 ATP7BP35670 1465 aa18.8■□□□□ 0.6
MSRB3-207ENST00000538045 ADAMTS2O95450 1211 aa18.8■□□□□ 0.6
MSRB3-207ENST00000538045 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
MSRB3-207ENST00000538045 CLSPNQ9HAW4 1339 aa18.79■□□□□ 0.6
MSRB3-207ENST00000538045 NGDNQ8NEJ9 315 aaKnown RBP18.79■□□□□ 0.6
MSRB3-207ENST00000538045 RALGAPBQ86X10 1494 aa18.78■□□□□ 0.6
MSRB3-207ENST00000538045 SRPK2P78362 688 aaKnown RBP18.78■□□□□ 0.6
MSRB3-207ENST00000538045 C8orf37Q96NL8 207 aa18.78■□□□□ 0.6
MSRB3-207ENST00000538045 CCDC61Q9Y6R9 512 aa18.78■□□□□ 0.6
MSRB3-207ENST00000538045 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
MSRB3-207ENST00000538045 ZNF772Q68DY9 489 aaPredicted RBP18.77■□□□□ 0.6
MSRB3-207ENST00000538045 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
MSRB3-207ENST00000538045 AFF2P51816 1311 aa18.76■□□□□ 0.59
MSRB3-207ENST00000538045 TNS3Q68CZ2 1445 aa18.76■□□□□ 0.59
MSRB3-207ENST00000538045 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
MSRB3-207ENST00000538045 TOPAZ1Q8N9V7 1692 aa18.76■□□□□ 0.59
MSRB3-207ENST00000538045 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
MSRB3-207ENST00000538045 SOCS7O14512 581 aa18.75■□□□□ 0.59
MSRB3-207ENST00000538045 NGLY1Q96IV0 654 aa18.75■□□□□ 0.59
MSRB3-207ENST00000538045 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
MSRB3-207ENST00000538045 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
MSRB3-207ENST00000538045 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
MSRB3-207ENST00000538045 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
MSRB3-207ENST00000538045 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
MSRB3-207ENST00000538045 ACEP12821 1306 aa18.73■□□□□ 0.59
MSRB3-207ENST00000538045 ARHGEF10O15013 1369 aa18.72■□□□□ 0.59
MSRB3-207ENST00000538045 PAK3O75914 559 aaPredicted RBP18.72■□□□□ 0.59
MSRB3-207ENST00000538045 PLEKHG5O94827 1062 aa18.72■□□□□ 0.59
MSRB3-207ENST00000538045 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
MSRB3-207ENST00000538045 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
MSRB3-207ENST00000538045 CABLES1Q8TDN4 633 aa18.71■□□□□ 0.59
MSRB3-207ENST00000538045 PPIP5K1Q6PFW1 1433 aa18.71■□□□□ 0.59
MSRB3-207ENST00000538045 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
MSRB3-207ENST00000538045 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
MSRB3-207ENST00000538045 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
MSRB3-207ENST00000538045 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms