RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-215	ENST00000537551	ADGRB1	O14514	1584 aa		33.5	■■■□□ 2.95
CHFR-215	ENST00000537551	PHLPP1	O60346	1717 aa		33.49	■■■□□ 2.95
CHFR-215	ENST00000537551	PCGF6	Q9BYE7	350 aa		33.49	■■■□□ 2.95
CHFR-215	ENST00000537551	C1orf167	Q5SNV9	1468 aa		33.48	■■■□□ 2.95
CHFR-215	ENST00000537551	DLC1	Q96QB1	1528 aa		33.44	■■■□□ 2.94
CHFR-215	ENST00000537551	CDC42BPG	Q6DT37	1551 aa		33.43	■■■□□ 2.94
CHFR-215	ENST00000537551	NUTM2F	A1L443	756 aa		33.43	■■■□□ 2.94
CHFR-215	ENST00000537551	ORAI2	Q96SN7	254 aa		33.43	■■■□□ 2.94
CHFR-215	ENST00000537551	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.41	■■■□□ 2.94
CHFR-215	ENST00000537551	ESCO1	Q5FWF5	840 aa		33.4	■■■□□ 2.94
CHFR-215	ENST00000537551	NBPF1	Q3BBV0	1214 aa		33.39	■■■□□ 2.94
CHFR-215	ENST00000537551	DDX17	Q92841	729 aa	Known RBP	33.39	■■■□□ 2.94
CHFR-215	ENST00000537551	JCAD	Q9P266	1359 aa		33.38	■■■□□ 2.93
CHFR-215	ENST00000537551	MED1	Q15648	1581 aa	Predicted RBP	33.38	■■■□□ 2.93
CHFR-215	ENST00000537551	COL16A1	Q07092	1604 aa	Predicted RBP	33.37	■■■□□ 2.93
CHFR-215	ENST00000537551	KIAA1210	Q9ULL0	1709 aa		33.36	■■■□□ 2.93
CHFR-215	ENST00000537551	TONSL	Q96HA7	1378 aa		33.34	■■■□□ 2.93
CHFR-215	ENST00000537551	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.33	■■■□□ 2.93
CHFR-215	ENST00000537551	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.33	■■■□□ 2.93
CHFR-215	ENST00000537551	PHF23	Q9BUL5	403 aa	Predicted RBP	33.32	■■■□□ 2.92
CHFR-215	ENST00000537551	LRRC59	Q96AG4	307 aa	Known RBP	33.31	■■■□□ 2.92
CHFR-215	ENST00000537551	NHSL1	Q5SYE7	1610 aa		33.31	■■■□□ 2.92
CHFR-215	ENST00000537551	FMN2	Q9NZ56	1722 aa		33.28	■■■□□ 2.92
CHFR-215	ENST00000537551	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.25	■■■□□ 2.91
CHFR-215	ENST00000537551	FOXO3	O43524	673 aa		33.25	■■■□□ 2.91
CHFR-215	ENST00000537551	NPHP3	Q7Z494	1330 aa		33.25	■■■□□ 2.91
CHFR-215	ENST00000537551	SOS2	Q07890	1332 aa	Predicted RBP	33.23	■■■□□ 2.91
CHFR-215	ENST00000537551	SPATA31A6	Q5VVP1	1343 aa		33.23	■■■□□ 2.91
CHFR-215	ENST00000537551	WASL	O00401	505 aa	Predicted RBP	33.22	■■■□□ 2.91
CHFR-215	ENST00000537551	NBPF8	Q3BBV2	869 aa		33.22	■■■□□ 2.91
CHFR-215	ENST00000537551	ROCK2	O75116	1388 aa	Known RBP	33.21	■■■□□ 2.91
CHFR-215	ENST00000537551	ADGRB2	O60241	1585 aa		33.21	■■■□□ 2.91
CHFR-215	ENST00000537551	PHF8	Q9UPP1	1060 aa		33.2	■■■□□ 2.91
CHFR-215	ENST00000537551	XPC	Q01831	940 aa	Predicted RBP	33.19	■■■□□ 2.9
CHFR-215	ENST00000537551	TRPM1	Q7Z4N2	1603 aa		33.18	■■■□□ 2.9
CHFR-215	ENST00000537551	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.18	■■■□□ 2.9
CHFR-215	ENST00000537551	NUTM2E	B1AL46	878 aa	Predicted RBP	33.18	■■■□□ 2.9
CHFR-215	ENST00000537551	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.18	■■■□□ 2.9
CHFR-215	ENST00000537551	EIF3A	Q14152	1382 aa	Known RBP	33.18	■■■□□ 2.9
CHFR-215	ENST00000537551	SHPRH	Q149N8	1683 aa		33.17	■■■□□ 2.9
CHFR-215	ENST00000537551	MEX3C	Q5U5Q3	659 aa	Known RBP	33.16	■■■□□ 2.9
CHFR-215	ENST00000537551	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.16	■■■□□ 2.9
CHFR-215	ENST00000537551	ANKAR	Q7Z5J8	1434 aa		33.16	■■■□□ 2.9
CHFR-215	ENST00000537551	RGPD8	O14715	1765 aa	Predicted RBP	33.15	■■■□□ 2.9
CHFR-215	ENST00000537551	ILDR2	Q71H61	639 aa		33.14	■■■□□ 2.9
CHFR-215	ENST00000537551	PNPLA6	Q8IY17	1366 aa		33.13	■■■□□ 2.89
CHFR-215	ENST00000537551	PMFBP1	Q8TBY8	1022 aa		33.13	■■■□□ 2.89
CHFR-215	ENST00000537551	CDK19	Q9BWU1	502 aa		33.13	■■■□□ 2.89
CHFR-215	ENST00000537551	KRT28	Q7Z3Y7	464 aa		33.12	■■■□□ 2.89
CHFR-215	ENST00000537551	KIF1A	Q12756	1690 aa		33.12	■■■□□ 2.89
CHFR-215	ENST00000537551	PRR36	Q9H6K5	1346 aa		33.1	■■■□□ 2.89
CHFR-215	ENST00000537551	TULP4	Q9NRJ4	1543 aa		33.1	■■■□□ 2.89
CHFR-215	ENST00000537551	PXDN	Q92626	1479 aa		33.1	■■■□□ 2.89
CHFR-215	ENST00000537551	PSME1	Q06323	249 aa		33.09	■■■□□ 2.89
CHFR-215	ENST00000537551	CLSPN	Q9HAW4	1339 aa		33.08	■■■□□ 2.89
CHFR-215	ENST00000537551	NUDT16	Q96DE0	195 aa	Known RBP	33.08	■■■□□ 2.89
CHFR-215	ENST00000537551	LRP6	O75581	1613 aa		33.08	■■■□□ 2.89
CHFR-215	ENST00000537551	USP32	Q8NFA0	1604 aa		33.08	■■■□□ 2.89
CHFR-215	ENST00000537551	CARD11	Q9BXL7	1154 aa		33.07	■■■□□ 2.88
CHFR-215	ENST00000537551	CCER1	Q8TC90	406 aa	Predicted RBP	33.06	■■■□□ 2.88
CHFR-215	ENST00000537551	RGS17	Q9UGC6	210 aa	Predicted RBP	33.05	■■■□□ 2.88
CHFR-215	ENST00000537551	GPRASP1	Q5JY77	1395 aa		33.04	■■■□□ 2.88
CHFR-215	ENST00000537551	SRPK2	P78362	688 aa	Known RBP	33.03	■■■□□ 2.88
CHFR-215	ENST00000537551	NGDN	Q8NEJ9	315 aa	Known RBP	33.03	■■■□□ 2.88
CHFR-215	ENST00000537551	SPATA31A3	Q5VYP0	1347 aa		33.01	■■■□□ 2.87
CHFR-215	ENST00000537551	RALGAPB	Q86X10	1494 aa		33	■■■□□ 2.87
CHFR-215	ENST00000537551	QRICH2	Q9H0J4	1663 aa		33	■■■□□ 2.87
CHFR-215	ENST00000537551	ATP7B	P35670	1465 aa		32.99	■■■□□ 2.87
CHFR-215	ENST00000537551	ADAMTS2	O95450	1211 aa		32.98	■■■□□ 2.87
CHFR-215	ENST00000537551	LMOD2	Q6P5Q4	547 aa		32.98	■■■□□ 2.87
CHFR-215	ENST00000537551	CCDC61	Q9Y6R9	512 aa		32.98	■■■□□ 2.87
CHFR-215	ENST00000537551	CABP2	Q9NPB3	220 aa		32.97	■■■□□ 2.87
CHFR-215	ENST00000537551	TIMELESS	Q9UNS1	1208 aa		32.97	■■■□□ 2.87
CHFR-215	ENST00000537551	EVC2	Q86UK5	1308 aa		32.95	■■■□□ 2.86
CHFR-215	ENST00000537551	C8orf37	Q96NL8	207 aa		32.94	■■■□□ 2.86
CHFR-215	ENST00000537551	SBNO1	A3KN83	1393 aa		32.94	■■■□□ 2.86
CHFR-215	ENST00000537551	POTEA	Q6S8J7	498 aa		32.93	■■■□□ 2.86
CHFR-215	ENST00000537551	ITSN1	Q15811	1721 aa		32.93	■■■□□ 2.86
CHFR-215	ENST00000537551	TNS3	Q68CZ2	1445 aa		32.93	■■■□□ 2.86
CHFR-215	ENST00000537551	ZNF772	Q68DY9	489 aa	Predicted RBP	32.92	■■■□□ 2.86
CHFR-215	ENST00000537551	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.91	■■■□□ 2.86
CHFR-215	ENST00000537551	PLEKHG5	O94827	1062 aa		32.9	■■■□□ 2.86
CHFR-215	ENST00000537551	NGLY1	Q96IV0	654 aa		32.9	■■■□□ 2.86
CHFR-215	ENST00000537551	PAK3	O75914	559 aa	Predicted RBP	32.89	■■■□□ 2.86
CHFR-215	ENST00000537551	ACE	P12821	1306 aa		32.88	■■■□□ 2.85
CHFR-215	ENST00000537551	AFF2	P51816	1311 aa		32.88	■■■□□ 2.85
CHFR-215	ENST00000537551	PLEKHG3	A1L390	1219 aa		32.88	■■■□□ 2.85
CHFR-215	ENST00000537551	ARHGEF10	O15013	1369 aa		32.87	■■■□□ 2.85
CHFR-215	ENST00000537551	HAP1	P54257	671 aa	Predicted RBP	32.87	■■■□□ 2.85
CHFR-215	ENST00000537551	PPIP5K1	Q6PFW1	1433 aa		32.85	■■■□□ 2.85
CHFR-215	ENST00000537551	TOPAZ1	Q8N9V7	1692 aa		32.83	■■■□□ 2.85
CHFR-215	ENST00000537551	CABLES1	Q8TDN4	633 aa		32.83	■■■□□ 2.85
CHFR-215	ENST00000537551	POLR3A	O14802	1390 aa	Predicted RBP	32.83	■■■□□ 2.85
CHFR-215	ENST00000537551	CABP1	Q9NZU7	370 aa		32.82	■■■□□ 2.84
CHFR-215	ENST00000537551	SBNO2	Q9Y2G9	1366 aa		32.8	■■■□□ 2.84
CHFR-215	ENST00000537551	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.8	■■■□□ 2.84
CHFR-215	ENST00000537551	SOCS7	O14512	581 aa		32.78	■■■□□ 2.84
CHFR-215	ENST00000537551	ST20-MTHFS	A0A0A6YYL1	179 aa		32.77	■■■□□ 2.84
CHFR-215	ENST00000537551	USP21	Q9UK80	565 aa		32.75	■■■□□ 2.83
CHFR-215	ENST00000537551	QTRT2	Q9H974	415 aa	Known RBP	32.74	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms