RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SHPRHQ149N8 1683 aa25.07■■□□□ 1.6
SFSWAP-205ENST00000537164 KDM2AQ9Y2K7 1162 aa25.06■■□□□ 1.6
SFSWAP-205ENST00000537164 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
SFSWAP-205ENST00000537164 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
SFSWAP-205ENST00000537164 ILDR2Q71H61 639 aa25.04■■□□□ 1.6
SFSWAP-205ENST00000537164 KIAA1210Q9ULL0 1709 aa25.03■■□□□ 1.6
SFSWAP-205ENST00000537164 FMN2Q9NZ56 1722 aa25.02■■□□□ 1.6
SFSWAP-205ENST00000537164 SPATA31A6Q5VVP1 1343 aa24.98■■□□□ 1.59
SFSWAP-205ENST00000537164 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
SFSWAP-205ENST00000537164 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
SFSWAP-205ENST00000537164 PRAM1Q96QH2 718 aa24.96■■□□□ 1.59
SFSWAP-205ENST00000537164 LRRC59Q96AG4 307 aaKnown RBP24.95■■□□□ 1.58
SFSWAP-205ENST00000537164 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
SFSWAP-205ENST00000537164 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
SFSWAP-205ENST00000537164 ARHGEF28Q8N1W1 1705 aaKnown RBP24.93■■□□□ 1.58
SFSWAP-205ENST00000537164 DDX17Q92841 729 aaKnown RBP24.93■■□□□ 1.58
SFSWAP-205ENST00000537164 RGS17Q9UGC6 210 aaPredicted RBP24.92■■□□□ 1.58
SFSWAP-205ENST00000537164 LRP6O75581 1613 aa24.92■■□□□ 1.58
SFSWAP-205ENST00000537164 TRAK1Q9UPV9 953 aa24.91■■□□□ 1.58
SFSWAP-205ENST00000537164 KIF1AQ12756 1690 aa24.91■■□□□ 1.58
SFSWAP-205ENST00000537164 RGPD8O14715 1765 aaPredicted RBP24.9■■□□□ 1.58
SFSWAP-205ENST00000537164 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
SFSWAP-205ENST00000537164 SIN3AQ96ST3 1273 aa24.9■■□□□ 1.58
SFSWAP-205ENST00000537164 POGKQ9P215 609 aa24.9■■□□□ 1.58
SFSWAP-205ENST00000537164 L3MBTL2Q969R5 705 aa24.89■■□□□ 1.58
SFSWAP-205ENST00000537164 NPHP3Q7Z494 1330 aa24.88■■□□□ 1.57
SFSWAP-205ENST00000537164 PNPLA6Q8IY17 1366 aa24.88■■□□□ 1.57
SFSWAP-205ENST00000537164 PXDNQ92626 1479 aa24.88■■□□□ 1.57
SFSWAP-205ENST00000537164 SAFB2Q14151 953 aaKnown RBP eCLIP24.86■■□□□ 1.575e-8■□□□□ 10.1
SFSWAP-205ENST00000537164 USP32Q8NFA0 1604 aa24.86■■□□□ 1.57
SFSWAP-205ENST00000537164 ANKARQ7Z5J8 1434 aa24.86■■□□□ 1.57
SFSWAP-205ENST00000537164 NUTM2FA1L443 756 aa24.85■■□□□ 1.57
SFSWAP-205ENST00000537164 COL22A1Q8NFW1 1626 aaPredicted RBP24.84■■□□□ 1.57
SFSWAP-205ENST00000537164 SOCS7O14512 581 aa24.83■■□□□ 1.57
SFSWAP-205ENST00000537164 FOXO3O43524 673 aa24.82■■□□□ 1.56
SFSWAP-205ENST00000537164 NBPF1Q3BBV0 1214 aa24.82■■□□□ 1.56
SFSWAP-205ENST00000537164 TRPM1Q7Z4N2 1603 aa24.82■■□□□ 1.56
SFSWAP-205ENST00000537164 EIF3AQ14152 1382 aaKnown RBP24.8■■□□□ 1.56
SFSWAP-205ENST00000537164 NEUROD1Q13562 356 aa24.8■■□□□ 1.56
SFSWAP-205ENST00000537164 TULP4Q9NRJ4 1543 aa24.8■■□□□ 1.56
SFSWAP-205ENST00000537164 MINK1Q8N4C8 1332 aaPredicted RBP24.79■■□□□ 1.56
SFSWAP-205ENST00000537164 WASLO00401 505 aaPredicted RBP24.78■■□□□ 1.56
SFSWAP-205ENST00000537164 PHF8Q9UPP1 1060 aa24.78■■□□□ 1.56
SFSWAP-205ENST00000537164 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
SFSWAP-205ENST00000537164 POTEAQ6S8J7 498 aa24.76■■□□□ 1.55
SFSWAP-205ENST00000537164 NUTM2BA6NNL0 878 aaPredicted RBP24.75■■□□□ 1.55
SFSWAP-205ENST00000537164 NUTM2EB1AL46 878 aaPredicted RBP24.75■■□□□ 1.55
SFSWAP-205ENST00000537164 MEX3CQ5U5Q3 659 aaKnown RBP24.75■■□□□ 1.55
SFSWAP-205ENST00000537164 NUTM2AQ8IVF1 878 aaPredicted RBP24.75■■□□□ 1.55
SFSWAP-205ENST00000537164 PRR36Q9H6K5 1346 aa24.74■■□□□ 1.55
SFSWAP-205ENST00000537164 ITSN1Q15811 1721 aa24.73■■□□□ 1.55
SFSWAP-205ENST00000537164 SPATA31A3Q5VYP0 1347 aa24.72■■□□□ 1.55
SFSWAP-205ENST00000537164 XPCQ01831 940 aaPredicted RBP24.72■■□□□ 1.55
SFSWAP-205ENST00000537164 ATP7BP35670 1465 aa24.71■■□□□ 1.55
SFSWAP-205ENST00000537164 ZNF772Q68DY9 489 aaPredicted RBP24.71■■□□□ 1.55
SFSWAP-205ENST00000537164 KRT28Q7Z3Y7 464 aa24.71■■□□□ 1.55
SFSWAP-205ENST00000537164 MARF1Q9Y4F3 1742 aaKnown RBP24.69■■□□□ 1.54
SFSWAP-205ENST00000537164 SBNO1A3KN83 1393 aa24.69■■□□□ 1.54
SFSWAP-205ENST00000537164 QRICH2Q9H0J4 1663 aa24.69■■□□□ 1.54
SFSWAP-205ENST00000537164 GPRASP1Q5JY77 1395 aa24.68■■□□□ 1.54
SFSWAP-205ENST00000537164 CENPJQ9HC77 1338 aaPredicted RBP24.68■■□□□ 1.54
SFSWAP-205ENST00000537164 PSME1Q06323 249 aa24.68■■□□□ 1.54
SFSWAP-205ENST00000537164 TRPM3Q9HCF6 1732 aaPredicted RBP24.68■■□□□ 1.54
SFSWAP-205ENST00000537164 TOPAZ1Q8N9V7 1692 aa24.68■■□□□ 1.54
SFSWAP-205ENST00000537164 TNS3Q68CZ2 1445 aa24.68■■□□□ 1.54
SFSWAP-205ENST00000537164 NBPF8Q3BBV2 869 aa24.66■■□□□ 1.54
SFSWAP-205ENST00000537164 PMFBP1Q8TBY8 1022 aa24.66■■□□□ 1.54
SFSWAP-205ENST00000537164 CDK19Q9BWU1 502 aa24.66■■□□□ 1.54
SFSWAP-205ENST00000537164 ROCK2O75116 1388 aaKnown RBP24.66■■□□□ 1.54
SFSWAP-205ENST00000537164 TONSLQ96HA7 1378 aa24.66■■□□□ 1.54
SFSWAP-205ENST00000537164 AFF2P51816 1311 aa24.65■■□□□ 1.54
SFSWAP-205ENST00000537164 NUDT16Q96DE0 195 aaKnown RBP24.65■■□□□ 1.54
SFSWAP-205ENST00000537164 ALS2Q96Q42 1657 aa24.63■■□□□ 1.53
SFSWAP-205ENST00000537164 C8orf37Q96NL8 207 aa24.63■■□□□ 1.53
SFSWAP-205ENST00000537164 ADAMTS2O95450 1211 aa24.62■■□□□ 1.53
SFSWAP-205ENST00000537164 ARHGEF10O15013 1369 aa24.61■■□□□ 1.53
SFSWAP-205ENST00000537164 ABCA3Q99758 1704 aa24.61■■□□□ 1.53
SFSWAP-205ENST00000537164 RALGAPBQ86X10 1494 aa24.6■■□□□ 1.53
SFSWAP-205ENST00000537164 FNBP4Q8N3X1 1017 aaPredicted RBP24.6■■□□□ 1.53
SFSWAP-205ENST00000537164 CCDC61Q9Y6R9 512 aa24.6■■□□□ 1.53
SFSWAP-205ENST00000537164 POLR3AO14802 1390 aaPredicted RBP24.59■■□□□ 1.53
SFSWAP-205ENST00000537164 NGLY1Q96IV0 654 aa24.59■■□□□ 1.53
SFSWAP-205ENST00000537164 PLEKHG3A1L390 1219 aa24.57■■□□□ 1.52
SFSWAP-205ENST00000537164 NGDNQ8NEJ9 315 aaKnown RBP24.57■■□□□ 1.52
SFSWAP-205ENST00000537164 CDK12Q9NYV4 1490 aaPredicted RBP24.57■■□□□ 1.52
SFSWAP-205ENST00000537164 CLSPNQ9HAW4 1339 aa24.56■■□□□ 1.52
SFSWAP-205ENST00000537164 CRYBG1Q9Y4K1 1723 aa24.54■■□□□ 1.52
SFSWAP-205ENST00000537164 SBNO2Q9Y2G9 1366 aa24.54■■□□□ 1.52
SFSWAP-205ENST00000537164 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.53■■□□□ 1.52
SFSWAP-205ENST00000537164 RXRBP28702 533 aa24.53■■□□□ 1.52
SFSWAP-205ENST00000537164 QTRT2Q9H974 415 aaKnown RBP24.53■■□□□ 1.52
SFSWAP-205ENST00000537164 BCL9LQ86UU0 1499 aa24.52■■□□□ 1.52
SFSWAP-205ENST00000537164 SRPK2P78362 688 aaKnown RBP24.52■■□□□ 1.52
SFSWAP-205ENST00000537164 ACEP12821 1306 aa24.52■■□□□ 1.52
SFSWAP-205ENST00000537164 SLIT2O94813 1529 aa24.51■■□□□ 1.51
SFSWAP-205ENST00000537164 CARD11Q9BXL7 1154 aa24.51■■□□□ 1.51
SFSWAP-205ENST00000537164 PCGF6Q9BYE7 350 aa24.51■■□□□ 1.51
SFSWAP-205ENST00000537164 USP21Q9UK80 565 aa24.51■■□□□ 1.51
SFSWAP-205ENST00000537164 EVC2Q86UK5 1308 aa24.51■■□□□ 1.51
SFSWAP-205ENST00000537164 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms