RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
LMO3-214ENST00000536509 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
LMO3-214ENST00000536509 PPLO60437 1756 aa16.74■□□□□ 0.27
LMO3-214ENST00000536509 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
LMO3-214ENST00000536509 RBM6P78332 1123 aaKnown RBP16.7■□□□□ 0.26
LMO3-214ENST00000536509 C8orf37Q96NL8 207 aa16.7■□□□□ 0.26
LMO3-214ENST00000536509 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
LMO3-214ENST00000536509 ROBO2Q9HCK4 1378 aa16.69■□□□□ 0.26
LMO3-214ENST00000536509 QTRT2Q9H974 415 aaKnown RBP16.69■□□□□ 0.26
LMO3-214ENST00000536509 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
LMO3-214ENST00000536509 NGLY1Q96IV0 654 aa16.67■□□□□ 0.26
LMO3-214ENST00000536509 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
LMO3-214ENST00000536509 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
LMO3-214ENST00000536509 ORAI2Q96SN7 254 aa16.64■□□□□ 0.25
LMO3-214ENST00000536509 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
LMO3-214ENST00000536509 RGS12O14924 1447 aa16.63■□□□□ 0.25
LMO3-214ENST00000536509 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
LMO3-214ENST00000536509 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
LMO3-214ENST00000536509 ATXN8OSP0DMR3 200 aa16.62■□□□□ 0.25
LMO3-214ENST00000536509 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
LMO3-214ENST00000536509 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
LMO3-214ENST00000536509 ANKRD30BQ9BXX2 1392 aa16.62■□□□□ 0.25
LMO3-214ENST00000536509 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
LMO3-214ENST00000536509 TECPR2O15040 1411 aa16.62■□□□□ 0.25
LMO3-214ENST00000536509 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
LMO3-214ENST00000536509 USP21Q9UK80 565 aa16.61■□□□□ 0.25
LMO3-214ENST00000536509 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
LMO3-214ENST00000536509 MARF1Q9Y4F3 1742 aaKnown RBP16.61■□□□□ 0.25
LMO3-214ENST00000536509 KNDC1Q76NI1 1749 aa16.6■□□□□ 0.25
LMO3-214ENST00000536509 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
LMO3-214ENST00000536509 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
LMO3-214ENST00000536509 SPATA31E1Q6ZUB1 1445 aa16.58■□□□□ 0.24
LMO3-214ENST00000536509 MYOM2P54296 1465 aa16.57■□□□□ 0.24
LMO3-214ENST00000536509 PXDNQ92626 1479 aa16.57■□□□□ 0.24
LMO3-214ENST00000536509 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
LMO3-214ENST00000536509 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
LMO3-214ENST00000536509 KIF1AQ12756 1690 aa16.56■□□□□ 0.24
LMO3-214ENST00000536509 ATRNO75882 1429 aa16.55■□□□□ 0.24
LMO3-214ENST00000536509 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
LMO3-214ENST00000536509 FMN2Q9NZ56 1722 aa16.54■□□□□ 0.24
LMO3-214ENST00000536509 FOXO3O43524 673 aa16.54■□□□□ 0.24
LMO3-214ENST00000536509 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
LMO3-214ENST00000536509 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
LMO3-214ENST00000536509 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.53■□□□□ 0.24
LMO3-214ENST00000536509 SIRT1Q96EB6 747 aa16.53■□□□□ 0.24
LMO3-214ENST00000536509 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
LMO3-214ENST00000536509 CCDC125Q86Z20 511 aa16.52■□□□□ 0.24
LMO3-214ENST00000536509 STK26Q9P289 416 aa16.52■□□□□ 0.24
LMO3-214ENST00000536509 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
LMO3-214ENST00000536509 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
LMO3-214ENST00000536509 YTHDC2Q9H6S0 1430 aaKnown RBP16.51■□□□□ 0.23
LMO3-214ENST00000536509 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
LMO3-214ENST00000536509 TMEM132EQ6IEE7 984 aa16.48■□□□□ 0.23
LMO3-214ENST00000536509 GJD4Q96KN9 370 aaPredicted RBP16.48■□□□□ 0.23
LMO3-214ENST00000536509 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
LMO3-214ENST00000536509 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
LMO3-214ENST00000536509 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
LMO3-214ENST00000536509 PLEKHH1Q9ULM0 1364 aa16.47■□□□□ 0.23
LMO3-214ENST00000536509 NRXN1Q9ULB1 1477 aa16.47■□□□□ 0.23
LMO3-214ENST00000536509 RGPD8O14715 1765 aaPredicted RBP16.46■□□□□ 0.23
LMO3-214ENST00000536509 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
LMO3-214ENST00000536509 PSME1Q06323 249 aa16.46■□□□□ 0.23
LMO3-214ENST00000536509 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
LMO3-214ENST00000536509 SLIT2O94813 1529 aa16.45■□□□□ 0.22
LMO3-214ENST00000536509 USP32Q8NFA0 1604 aa16.45■□□□□ 0.22
LMO3-214ENST00000536509 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
LMO3-214ENST00000536509 ZRANB1Q9UGI0 708 aa16.44■□□□□ 0.22
LMO3-214ENST00000536509 NWD2Q9ULI1 1742 aa16.43■□□□□ 0.22
LMO3-214ENST00000536509 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
LMO3-214ENST00000536509 TNS3Q68CZ2 1445 aa16.43■□□□□ 0.22
LMO3-214ENST00000536509 EP400Q96L91 3159 aa16.42■□□□□ 0.22
LMO3-214ENST00000536509 SBNO1A3KN83 1393 aa16.42■□□□□ 0.22
LMO3-214ENST00000536509 DLC1Q96QB1 1528 aa16.42■□□□□ 0.22
LMO3-214ENST00000536509 RALGAPBQ86X10 1494 aa16.42■□□□□ 0.22
LMO3-214ENST00000536509 ARHGEF10O15013 1369 aa16.41■□□□□ 0.22
LMO3-214ENST00000536509 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
LMO3-214ENST00000536509 GLI3P10071 1580 aa16.41■□□□□ 0.22
LMO3-214ENST00000536509 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
LMO3-214ENST00000536509 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
LMO3-214ENST00000536509 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
LMO3-214ENST00000536509 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
LMO3-214ENST00000536509 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
LMO3-214ENST00000536509 PLCH1Q4KWH8 1693 aa16.39■□□□□ 0.21
LMO3-214ENST00000536509 ABCA3Q99758 1704 aa16.39■□□□□ 0.21
LMO3-214ENST00000536509 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
LMO3-214ENST00000536509 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
LMO3-214ENST00000536509 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
LMO3-214ENST00000536509 EIF3AQ14152 1382 aaKnown RBP16.38■□□□□ 0.21
LMO3-214ENST00000536509 VPS72Q15906 364 aa16.37■□□□□ 0.21
LMO3-214ENST00000536509 STAC3Q96MF2 364 aa16.37■□□□□ 0.21
LMO3-214ENST00000536509 POGKQ9P215 609 aa16.37■□□□□ 0.21
LMO3-214ENST00000536509 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
LMO3-214ENST00000536509 SF3B2Q13435 895 aaKnown RBP16.34■□□□□ 0.21
LMO3-214ENST00000536509 LMOD2Q6P5Q4 547 aa16.34■□□□□ 0.21
LMO3-214ENST00000536509 ADGRB1O14514 1584 aa16.34■□□□□ 0.21
LMO3-214ENST00000536509 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.21
LMO3-214ENST00000536509 SAFB2Q14151 953 aaKnown RBP eCLIP16.33■□□□□ 0.2
LMO3-214ENST00000536509 SEPT12Q8IYM1 358 aa16.33■□□□□ 0.2
LMO3-214ENST00000536509 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.2
LMO3-214ENST00000536509 CABLES1Q8TDN4 633 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms