RNA–Protein interactions for RNA: ENST00000535954.1

C2CD3-209, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-209ENST00000535954 POTEAQ6S8J7 498 aa13.08□□□□□ -0.32
C2CD3-209ENST00000535954 STK26Q9P289 416 aa13.08□□□□□ -0.32
C2CD3-209ENST00000535954 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
C2CD3-209ENST00000535954 YTHDC2Q9H6S0 1430 aaKnown RBP13.07□□□□□ -0.32
C2CD3-209ENST00000535954 LRP6O75581 1613 aa13.07□□□□□ -0.32
C2CD3-209ENST00000535954 ADGRB1O14514 1584 aa13.05□□□□□ -0.32
C2CD3-209ENST00000535954 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
C2CD3-209ENST00000535954 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
C2CD3-209ENST00000535954 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
C2CD3-209ENST00000535954 DCAF11Q8TEB1 546 aa13.03□□□□□ -0.32
C2CD3-209ENST00000535954 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
C2CD3-209ENST00000535954 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
C2CD3-209ENST00000535954 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
C2CD3-209ENST00000535954 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
C2CD3-209ENST00000535954 RGPD8O14715 1765 aaPredicted RBP13.01□□□□□ -0.33
C2CD3-209ENST00000535954 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
C2CD3-209ENST00000535954 DLC1Q96QB1 1528 aa12.99□□□□□ -0.33
C2CD3-209ENST00000535954 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
C2CD3-209ENST00000535954 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
C2CD3-209ENST00000535954 PRAM1Q96QH2 718 aa12.98□□□□□ -0.33
C2CD3-209ENST00000535954 PXDNQ92626 1479 aa12.97□□□□□ -0.33
C2CD3-209ENST00000535954 FOXO3O43524 673 aa12.97□□□□□ -0.33
C2CD3-209ENST00000535954 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
C2CD3-209ENST00000535954 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
C2CD3-209ENST00000535954 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.33
C2CD3-209ENST00000535954 TRAK1Q9UPV9 953 aa12.96□□□□□ -0.33
C2CD3-209ENST00000535954 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
C2CD3-209ENST00000535954 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
C2CD3-209ENST00000535954 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
C2CD3-209ENST00000535954 NBPF1Q3BBV0 1214 aa12.94□□□□□ -0.34
C2CD3-209ENST00000535954 SIN3AQ96ST3 1273 aa12.94□□□□□ -0.34
C2CD3-209ENST00000535954 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
C2CD3-209ENST00000535954 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
C2CD3-209ENST00000535954 ADGRB2O60241 1585 aa12.93□□□□□ -0.34
C2CD3-209ENST00000535954 PRR36Q9H6K5 1346 aa12.92□□□□□ -0.34
C2CD3-209ENST00000535954 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
C2CD3-209ENST00000535954 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
C2CD3-209ENST00000535954 AFF2P51816 1311 aa12.91□□□□□ -0.34
C2CD3-209ENST00000535954 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
C2CD3-209ENST00000535954 MEX3CQ5U5Q3 659 aaKnown RBP12.91□□□□□ -0.34
C2CD3-209ENST00000535954 L3MBTL2Q969R5 705 aa12.91□□□□□ -0.34
C2CD3-209ENST00000535954 POGKQ9P215 609 aa12.91□□□□□ -0.34
C2CD3-209ENST00000535954 PHF8Q9UPP1 1060 aa12.91□□□□□ -0.34
C2CD3-209ENST00000535954 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
C2CD3-209ENST00000535954 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
C2CD3-209ENST00000535954 WASLO00401 505 aaPredicted RBP12.9□□□□□ -0.34
C2CD3-209ENST00000535954 KRT28Q7Z3Y7 464 aa12.9□□□□□ -0.34
C2CD3-209ENST00000535954 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
C2CD3-209ENST00000535954 MINK1Q8N4C8 1332 aaPredicted RBP12.89□□□□□ -0.35
C2CD3-209ENST00000535954 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
C2CD3-209ENST00000535954 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
C2CD3-209ENST00000535954 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
C2CD3-209ENST00000535954 C8orf37Q96NL8 207 aa12.88□□□□□ -0.35
C2CD3-209ENST00000535954 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
C2CD3-209ENST00000535954 PMFBP1Q8TBY8 1022 aa12.87□□□□□ -0.35
C2CD3-209ENST00000535954 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
C2CD3-209ENST00000535954 RXRBP28702 533 aa12.86□□□□□ -0.35
C2CD3-209ENST00000535954 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
C2CD3-209ENST00000535954 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
C2CD3-209ENST00000535954 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
C2CD3-209ENST00000535954 SBNO1A3KN83 1393 aa12.85□□□□□ -0.35
C2CD3-209ENST00000535954 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
C2CD3-209ENST00000535954 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
C2CD3-209ENST00000535954 CDK19Q9BWU1 502 aa12.84□□□□□ -0.35
C2CD3-209ENST00000535954 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-209ENST00000535954 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
C2CD3-209ENST00000535954 RBM6P78332 1123 aaKnown RBP12.83□□□□□ -0.36
C2CD3-209ENST00000535954 PSME1Q06323 249 aa12.83□□□□□ -0.36
C2CD3-209ENST00000535954 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
C2CD3-209ENST00000535954 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
C2CD3-209ENST00000535954 NUDT16Q96DE0 195 aaKnown RBP12.83□□□□□ -0.36
C2CD3-209ENST00000535954 USP21Q9UK80 565 aa12.83□□□□□ -0.36
C2CD3-209ENST00000535954 ATP7BP35670 1465 aa12.83□□□□□ -0.36
C2CD3-209ENST00000535954 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
C2CD3-209ENST00000535954 ATRNO75882 1429 aa12.82□□□□□ -0.36
C2CD3-209ENST00000535954 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
C2CD3-209ENST00000535954 TRIM26Q12899 539 aaPredicted RBP12.82□□□□□ -0.36
C2CD3-209ENST00000535954 SLIT2O94813 1529 aa12.81□□□□□ -0.36
C2CD3-209ENST00000535954 ABCA3Q99758 1704 aa12.8□□□□□ -0.36
C2CD3-209ENST00000535954 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
C2CD3-209ENST00000535954 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.36
C2CD3-209ENST00000535954 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
C2CD3-209ENST00000535954 RGS12O14924 1447 aa12.79□□□□□ -0.36
C2CD3-209ENST00000535954 TRPC5Q9UL62 973 aaPredicted RBP12.79□□□□□ -0.36
C2CD3-209ENST00000535954 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
C2CD3-209ENST00000535954 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
C2CD3-209ENST00000535954 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
C2CD3-209ENST00000535954 FAM83GA6ND36 823 aa12.78□□□□□ -0.36
C2CD3-209ENST00000535954 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
C2CD3-209ENST00000535954 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
C2CD3-209ENST00000535954 CENPJQ9HC77 1338 aaPredicted RBP12.78□□□□□ -0.36
C2CD3-209ENST00000535954 ITSN1Q15811 1721 aa12.77□□□□□ -0.36
C2CD3-209ENST00000535954 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
C2CD3-209ENST00000535954 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.37
C2CD3-209ENST00000535954 EP400Q96L91 3159 aa12.77□□□□□ -0.37
C2CD3-209ENST00000535954 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
C2CD3-209ENST00000535954 NGDNQ8NEJ9 315 aaKnown RBP12.76□□□□□ -0.37
C2CD3-209ENST00000535954 GJD4Q96KN9 370 aaPredicted RBP12.76□□□□□ -0.37
C2CD3-209ENST00000535954 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
C2CD3-209ENST00000535954 ACEP12821 1306 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms