RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-204ENST00000535406 STK26Q9P289 416 aa13.8□□□□□ -0.2
CDCA3-204ENST00000535406 ABCC11Q96J66 1382 aa13.79□□□□□ -0.2
CDCA3-204ENST00000535406 JCADQ9P266 1359 aa13.79□□□□□ -0.2
CDCA3-204ENST00000535406 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
CDCA3-204ENST00000535406 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
CDCA3-204ENST00000535406 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
CDCA3-204ENST00000535406 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
CDCA3-204ENST00000535406 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
CDCA3-204ENST00000535406 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
CDCA3-204ENST00000535406 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
CDCA3-204ENST00000535406 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.21
CDCA3-204ENST00000535406 PLEKHH1Q9ULM0 1364 aa13.76□□□□□ -0.21
CDCA3-204ENST00000535406 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
CDCA3-204ENST00000535406 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
CDCA3-204ENST00000535406 STAC3Q96MF2 364 aa13.75□□□□□ -0.21
CDCA3-204ENST00000535406 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
CDCA3-204ENST00000535406 DLC1Q96QB1 1528 aa13.74□□□□□ -0.21
CDCA3-204ENST00000535406 FMN2Q9NZ56 1722 aa13.73□□□□□ -0.21
CDCA3-204ENST00000535406 SPATA31A6Q5VVP1 1343 aa13.72□□□□□ -0.21
CDCA3-204ENST00000535406 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
CDCA3-204ENST00000535406 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
CDCA3-204ENST00000535406 LRP6O75581 1613 aa13.71□□□□□ -0.21
CDCA3-204ENST00000535406 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
CDCA3-204ENST00000535406 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
CDCA3-204ENST00000535406 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
CDCA3-204ENST00000535406 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
CDCA3-204ENST00000535406 KIAA1210Q9ULL0 1709 aa13.69□□□□□ -0.22
CDCA3-204ENST00000535406 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
CDCA3-204ENST00000535406 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDCA3-204ENST00000535406 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
CDCA3-204ENST00000535406 POGKQ9P215 609 aa13.68□□□□□ -0.22
CDCA3-204ENST00000535406 TRAK1Q9UPV9 953 aa13.68□□□□□ -0.22
CDCA3-204ENST00000535406 KIF1AQ12756 1690 aa13.68□□□□□ -0.22
CDCA3-204ENST00000535406 PNPLA6Q8IY17 1366 aa13.68□□□□□ -0.22
CDCA3-204ENST00000535406 ARHGEF28Q8N1W1 1705 aaKnown RBP13.68□□□□□ -0.22
CDCA3-204ENST00000535406 SOCS7O14512 581 aa13.67□□□□□ -0.22
CDCA3-204ENST00000535406 TRIM26Q12899 539 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-204ENST00000535406 MEX3CQ5U5Q3 659 aaKnown RBP13.67□□□□□ -0.22
CDCA3-204ENST00000535406 RGS17Q9UGC6 210 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-204ENST00000535406 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-204ENST00000535406 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
CDCA3-204ENST00000535406 PXDNQ92626 1479 aa13.65□□□□□ -0.22
CDCA3-204ENST00000535406 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
CDCA3-204ENST00000535406 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
CDCA3-204ENST00000535406 NUTM2AQ8IVF1 878 aaPredicted RBP13.64□□□□□ -0.23
CDCA3-204ENST00000535406 RGPD8O14715 1765 aaPredicted RBP13.64□□□□□ -0.23
CDCA3-204ENST00000535406 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
CDCA3-204ENST00000535406 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
CDCA3-204ENST00000535406 USP32Q8NFA0 1604 aa13.63□□□□□ -0.23
CDCA3-204ENST00000535406 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
CDCA3-204ENST00000535406 FOXO3O43524 673 aa13.63□□□□□ -0.23
CDCA3-204ENST00000535406 SIN3AQ96ST3 1273 aa13.63□□□□□ -0.23
CDCA3-204ENST00000535406 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
CDCA3-204ENST00000535406 EIF3AQ14152 1382 aaKnown RBP13.63□□□□□ -0.23
CDCA3-204ENST00000535406 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-204ENST00000535406 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
CDCA3-204ENST00000535406 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
CDCA3-204ENST00000535406 TULP4Q9NRJ4 1543 aa13.61□□□□□ -0.23
CDCA3-204ENST00000535406 XPCQ01831 940 aaPredicted RBP13.61□□□□□ -0.23
CDCA3-204ENST00000535406 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
CDCA3-204ENST00000535406 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
CDCA3-204ENST00000535406 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-204ENST00000535406 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
CDCA3-204ENST00000535406 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
CDCA3-204ENST00000535406 ITSN1Q15811 1721 aa13.58□□□□□ -0.23
CDCA3-204ENST00000535406 WASLO00401 505 aaPredicted RBP13.58□□□□□ -0.24
CDCA3-204ENST00000535406 C8orf37Q96NL8 207 aa13.58□□□□□ -0.24
CDCA3-204ENST00000535406 AFF2P51816 1311 aa13.57□□□□□ -0.24
CDCA3-204ENST00000535406 TNS3Q68CZ2 1445 aa13.57□□□□□ -0.24
CDCA3-204ENST00000535406 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
CDCA3-204ENST00000535406 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
CDCA3-204ENST00000535406 ATP7BP35670 1465 aa13.57□□□□□ -0.24
CDCA3-204ENST00000535406 KRT28Q7Z3Y7 464 aa13.56□□□□□ -0.24
CDCA3-204ENST00000535406 PMFBP1Q8TBY8 1022 aa13.56□□□□□ -0.24
CDCA3-204ENST00000535406 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
CDCA3-204ENST00000535406 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
CDCA3-204ENST00000535406 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
CDCA3-204ENST00000535406 MARF1Q9Y4F3 1742 aaKnown RBP13.55□□□□□ -0.24
CDCA3-204ENST00000535406 PSME1Q06323 249 aa13.55□□□□□ -0.24
CDCA3-204ENST00000535406 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
CDCA3-204ENST00000535406 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
CDCA3-204ENST00000535406 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
CDCA3-204ENST00000535406 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-204ENST00000535406 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-204ENST00000535406 SBNO1A3KN83 1393 aa13.54□□□□□ -0.24
CDCA3-204ENST00000535406 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-204ENST00000535406 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
CDCA3-204ENST00000535406 ARHGEF10O15013 1369 aa13.53□□□□□ -0.24
CDCA3-204ENST00000535406 GPRASP1Q5JY77 1395 aa13.53□□□□□ -0.24
CDCA3-204ENST00000535406 ABCA3Q99758 1704 aa13.52□□□□□ -0.25
CDCA3-204ENST00000535406 CDK19Q9BWU1 502 aa13.51□□□□□ -0.25
CDCA3-204ENST00000535406 RXRBP28702 533 aa13.5□□□□□ -0.25
CDCA3-204ENST00000535406 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
CDCA3-204ENST00000535406 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
CDCA3-204ENST00000535406 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
CDCA3-204ENST00000535406 ALS2Q96Q42 1657 aa13.5□□□□□ -0.25
CDCA3-204ENST00000535406 CDK12Q9NYV4 1490 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-204ENST00000535406 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-204ENST00000535406 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms