RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 CDC42BPGQ6DT37 1551 aa27.48■■□□□ 1.99
PACS1-215ENST00000534273 PRAM1Q96QH2 718 aa27.48■■□□□ 1.99
PACS1-215ENST00000534273 JCADQ9P266 1359 aa27.48■■□□□ 1.99
PACS1-215ENST00000534273 ORAI2Q96SN7 254 aa27.47■■□□□ 1.99
PACS1-215ENST00000534273 DLC1Q96QB1 1528 aa27.46■■□□□ 1.99
PACS1-215ENST00000534273 L3MBTL2Q969R5 705 aa27.45■■□□□ 1.98
PACS1-215ENST00000534273 TRAK1Q9UPV9 953 aa27.45■■□□□ 1.98
PACS1-215ENST00000534273 NEUROD1Q13562 356 aa27.44■■□□□ 1.98
PACS1-215ENST00000534273 DDX17Q92841 729 aaKnown RBP27.44■■□□□ 1.98
PACS1-215ENST00000534273 POGKQ9P215 609 aa27.44■■□□□ 1.98
PACS1-215ENST00000534273 SAFB2Q14151 953 aaKnown RBP eCLIP27.43■■□□□ 1.98
PACS1-215ENST00000534273 ILDR2Q71H61 639 aa27.41■■□□□ 1.98
PACS1-215ENST00000534273 NHSL1Q5SYE7 1610 aa27.39■■□□□ 1.98
PACS1-215ENST00000534273 NUTM2FA1L443 756 aa27.39■■□□□ 1.98
PACS1-215ENST00000534273 ESCO1Q5FWF5 840 aa27.39■■□□□ 1.98
PACS1-215ENST00000534273 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
PACS1-215ENST00000534273 NBPF1Q3BBV0 1214 aa27.37■■□□□ 1.97
PACS1-215ENST00000534273 LRRC59Q96AG4 307 aaKnown RBP27.37■■□□□ 1.97
PACS1-215ENST00000534273 SOS2Q07890 1332 aaPredicted RBP27.35■■□□□ 1.97
PACS1-215ENST00000534273 SPATA31A6Q5VVP1 1343 aa27.35■■□□□ 1.97
PACS1-215ENST00000534273 KIAA1210Q9ULL0 1709 aa27.33■■□□□ 1.97
PACS1-215ENST00000534273 FMN2Q9NZ56 1722 aa27.33■■□□□ 1.96
PACS1-215ENST00000534273 MINK1Q8N4C8 1332 aaPredicted RBP27.32■■□□□ 1.96
PACS1-215ENST00000534273 HIRIP3Q9BW71 556 aaPredicted RBP27.31■■□□□ 1.96
PACS1-215ENST00000534273 RGS17Q9UGC6 210 aaPredicted RBP27.3■■□□□ 1.96
PACS1-215ENST00000534273 NPHP3Q7Z494 1330 aa27.3■■□□□ 1.96
PACS1-215ENST00000534273 SHPRHQ149N8 1683 aa27.3■■□□□ 1.96
PACS1-215ENST00000534273 FOXO3O43524 673 aa27.29■■□□□ 1.96
PACS1-215ENST00000534273 ADGRB2O60241 1585 aa27.28■■□□□ 1.96
PACS1-215ENST00000534273 PNPLA6Q8IY17 1366 aa27.28■■□□□ 1.96
PACS1-215ENST00000534273 LRP6O75581 1613 aa27.27■■□□□ 1.96
PACS1-215ENST00000534273 WASLO00401 505 aaPredicted RBP27.25■■□□□ 1.95
PACS1-215ENST00000534273 PHF8Q9UPP1 1060 aa27.25■■□□□ 1.95
PACS1-215ENST00000534273 PXDNQ92626 1479 aa27.25■■□□□ 1.95
PACS1-215ENST00000534273 ANKARQ7Z5J8 1434 aa27.24■■□□□ 1.95
PACS1-215ENST00000534273 ARHGEF28Q8N1W1 1705 aaKnown RBP27.24■■□□□ 1.95
PACS1-215ENST00000534273 NUTM2BA6NNL0 878 aaPredicted RBP27.24■■□□□ 1.95
PACS1-215ENST00000534273 NUTM2EB1AL46 878 aaPredicted RBP27.24■■□□□ 1.95
PACS1-215ENST00000534273 XPCQ01831 940 aaPredicted RBP27.24■■□□□ 1.95
PACS1-215ENST00000534273 NUTM2AQ8IVF1 878 aaPredicted RBP27.24■■□□□ 1.95
PACS1-215ENST00000534273 EIF3AQ14152 1382 aaKnown RBP27.22■■□□□ 1.95
PACS1-215ENST00000534273 NBPF8Q3BBV2 869 aa27.21■■□□□ 1.95
PACS1-215ENST00000534273 MEX3CQ5U5Q3 659 aaKnown RBP27.21■■□□□ 1.95
PACS1-215ENST00000534273 PCGF6Q9BYE7 350 aa27.21■■□□□ 1.95
PACS1-215ENST00000534273 PRR36Q9H6K5 1346 aa27.2■■□□□ 1.95
PACS1-215ENST00000534273 TONSLQ96HA7 1378 aa27.2■■□□□ 1.94
PACS1-215ENST00000534273 KIF1AQ12756 1690 aa27.18■■□□□ 1.94
PACS1-215ENST00000534273 KRT28Q7Z3Y7 464 aa27.18■■□□□ 1.94
PACS1-215ENST00000534273 USP32Q8NFA0 1604 aa27.18■■□□□ 1.94
PACS1-215ENST00000534273 TULP4Q9NRJ4 1543 aa27.17■■□□□ 1.94
PACS1-215ENST00000534273 CENPJQ9HC77 1338 aaPredicted RBP27.16■■□□□ 1.94
PACS1-215ENST00000534273 POTEAQ6S8J7 498 aa27.16■■□□□ 1.94
PACS1-215ENST00000534273 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
PACS1-215ENST00000534273 TRPM1Q7Z4N2 1603 aa27.16■■□□□ 1.94
PACS1-215ENST00000534273 RGPD8O14715 1765 aaPredicted RBP27.15■■□□□ 1.94
PACS1-215ENST00000534273 PMFBP1Q8TBY8 1022 aa27.15■■□□□ 1.94
PACS1-215ENST00000534273 CDK19Q9BWU1 502 aa27.15■■□□□ 1.94
PACS1-215ENST00000534273 SPATA31A3Q5VYP0 1347 aa27.14■■□□□ 1.93
PACS1-215ENST00000534273 NUDT16Q96DE0 195 aaKnown RBP27.13■■□□□ 1.93
PACS1-215ENST00000534273 SOCS7O14512 581 aa27.12■■□□□ 1.93
PACS1-215ENST00000534273 PSME1Q06323 249 aa27.12■■□□□ 1.93
PACS1-215ENST00000534273 GPRASP1Q5JY77 1395 aa27.11■■□□□ 1.93
PACS1-215ENST00000534273 ATP7BP35670 1465 aa27.09■■□□□ 1.93
PACS1-215ENST00000534273 ADAMTS2O95450 1211 aa27.09■■□□□ 1.93
PACS1-215ENST00000534273 SBNO1A3KN83 1393 aa27.09■■□□□ 1.93
PACS1-215ENST00000534273 COL22A1Q8NFW1 1626 aaPredicted RBP27.08■■□□□ 1.93
PACS1-215ENST00000534273 ZNF772Q68DY9 489 aaPredicted RBP27.08■■□□□ 1.93
PACS1-215ENST00000534273 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
PACS1-215ENST00000534273 TNS3Q68CZ2 1445 aa27.06■■□□□ 1.92
PACS1-215ENST00000534273 NGDNQ8NEJ9 315 aaKnown RBP27.05■■□□□ 1.92
PACS1-215ENST00000534273 CCDC61Q9Y6R9 512 aa27.05■■□□□ 1.92
PACS1-215ENST00000534273 AFF2P51816 1311 aa27.05■■□□□ 1.92
PACS1-215ENST00000534273 RALGAPBQ86X10 1494 aa27.03■■□□□ 1.92
PACS1-215ENST00000534273 CARD11Q9BXL7 1154 aa27.03■■□□□ 1.92
PACS1-215ENST00000534273 CLSPNQ9HAW4 1339 aa27.02■■□□□ 1.92
PACS1-215ENST00000534273 SRPK2P78362 688 aaKnown RBP27.02■■□□□ 1.92
PACS1-215ENST00000534273 NGLY1Q96IV0 654 aa27.02■■□□□ 1.92
PACS1-215ENST00000534273 PLEKHG3A1L390 1219 aa27.01■■□□□ 1.91
PACS1-215ENST00000534273 CABP2Q9NPB3 220 aa27.01■■□□□ 1.91
PACS1-215ENST00000534273 QRICH2Q9H0J4 1663 aa27.01■■□□□ 1.91
PACS1-215ENST00000534273 ARHGEF10O15013 1369 aa27■■□□□ 1.91
PACS1-215ENST00000534273 LMOD2Q6P5Q4 547 aa26.99■■□□□ 1.91
PACS1-215ENST00000534273 POLR3AO14802 1390 aaPredicted RBP26.97■■□□□ 1.91
PACS1-215ENST00000534273 ACEP12821 1306 aa26.97■■□□□ 1.91
PACS1-215ENST00000534273 EVC2Q86UK5 1308 aa26.97■■□□□ 1.91
PACS1-215ENST00000534273 ITSN1Q15811 1721 aa26.96■■□□□ 1.91
PACS1-215ENST00000534273 FNBP4Q8N3X1 1017 aaPredicted RBP26.96■■□□□ 1.91
PACS1-215ENST00000534273 CABLES1Q8TDN4 633 aa26.96■■□□□ 1.91
PACS1-215ENST00000534273 TRPM3Q9HCF6 1732 aaPredicted RBP26.95■■□□□ 1.9
PACS1-215ENST00000534273 TOPAZ1Q8N9V7 1692 aa26.95■■□□□ 1.9
PACS1-215ENST00000534273 TIMELESSQ9UNS1 1208 aa26.94■■□□□ 1.9
PACS1-215ENST00000534273 PPIP5K1Q6PFW1 1433 aa26.93■■□□□ 1.9
PACS1-215ENST00000534273 QTRT2Q9H974 415 aaKnown RBP26.93■■□□□ 1.9
PACS1-215ENST00000534273 PAK3O75914 559 aaPredicted RBP26.92■■□□□ 1.9
PACS1-215ENST00000534273 PLEKHG5O94827 1062 aa26.92■■□□□ 1.9
PACS1-215ENST00000534273 USP21Q9UK80 565 aa26.92■■□□□ 1.9
PACS1-215ENST00000534273 RXRBP28702 533 aa26.91■■□□□ 1.9
PACS1-215ENST00000534273 SBNO2Q9Y2G9 1366 aa26.91■■□□□ 1.9
PACS1-215ENST00000534273 HAP1P54257 671 aaPredicted RBP26.9■■□□□ 1.9
PACS1-215ENST00000534273 CABP1Q9NZU7 370 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms