RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ADGRB1O14514 1584 aa19.22■□□□□ 0.67
CAPN1-227ENST00000533909 TONSLQ96HA7 1378 aa19.21■□□□□ 0.67
CAPN1-227ENST00000533909 PHLPP1O60346 1717 aa19.21■□□□□ 0.67
CAPN1-227ENST00000533909 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
CAPN1-227ENST00000533909 CDC42BPGQ6DT37 1551 aa19.2■□□□□ 0.66
CAPN1-227ENST00000533909 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
CAPN1-227ENST00000533909 C1orf167Q5SNV9 1468 aa19.19■□□□□ 0.66
CAPN1-227ENST00000533909 NUTM2FA1L443 756 aa19.18■□□□□ 0.66
CAPN1-227ENST00000533909 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
CAPN1-227ENST00000533909 KIAA1210Q9ULL0 1709 aa19.17■□□□□ 0.66
CAPN1-227ENST00000533909 AHDC1Q5TGY3 1603 aaPredicted RBP19.15■□□□□ 0.66
CAPN1-227ENST00000533909 ORAI2Q96SN7 254 aa19.15■□□□□ 0.66
CAPN1-227ENST00000533909 NBPF1Q3BBV0 1214 aa19.14■□□□□ 0.65
CAPN1-227ENST00000533909 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-227ENST00000533909 MINK1Q8N4C8 1332 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-227ENST00000533909 JCADQ9P266 1359 aa19.14■□□□□ 0.65
CAPN1-227ENST00000533909 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-227ENST00000533909 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-227ENST00000533909 MED1Q15648 1581 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-227ENST00000533909 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
CAPN1-227ENST00000533909 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
CAPN1-227ENST00000533909 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
CAPN1-227ENST00000533909 LRRC59Q96AG4 307 aaKnown RBP19.1■□□□□ 0.65
CAPN1-227ENST00000533909 FMN2Q9NZ56 1722 aa19.1■□□□□ 0.65
CAPN1-227ENST00000533909 NPHP3Q7Z494 1330 aa19.09■□□□□ 0.65
CAPN1-227ENST00000533909 NHSL1Q5SYE7 1610 aa19.09■□□□□ 0.65
CAPN1-227ENST00000533909 ARHGEF28Q8N1W1 1705 aaKnown RBP19.08■□□□□ 0.65
CAPN1-227ENST00000533909 WASLO00401 505 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-227ENST00000533909 FOXO3O43524 673 aa19.07■□□□□ 0.64
CAPN1-227ENST00000533909 CCER1Q8TC90 406 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-227ENST00000533909 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
CAPN1-227ENST00000533909 CENPJQ9HC77 1338 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-227ENST00000533909 MEX3CQ5U5Q3 659 aaKnown RBP19.06■□□□□ 0.64
CAPN1-227ENST00000533909 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
CAPN1-227ENST00000533909 SPATA31A6Q5VVP1 1343 aa19.05■□□□□ 0.64
CAPN1-227ENST00000533909 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
CAPN1-227ENST00000533909 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
CAPN1-227ENST00000533909 ANKARQ7Z5J8 1434 aa19.05■□□□□ 0.64
CAPN1-227ENST00000533909 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
CAPN1-227ENST00000533909 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-227ENST00000533909 NUTM2BA6NNL0 878 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-227ENST00000533909 NUTM2EB1AL46 878 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-227ENST00000533909 XPCQ01831 940 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-227ENST00000533909 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-227ENST00000533909 KIF1AQ12756 1690 aa19.03■□□□□ 0.64
CAPN1-227ENST00000533909 SHPRHQ149N8 1683 aa19.02■□□□□ 0.64
CAPN1-227ENST00000533909 CARD11Q9BXL7 1154 aa19.02■□□□□ 0.64
CAPN1-227ENST00000533909 TULP4Q9NRJ4 1543 aa19.01■□□□□ 0.63
CAPN1-227ENST00000533909 PSME1Q06323 249 aa19.01■□□□□ 0.63
CAPN1-227ENST00000533909 CDK19Q9BWU1 502 aa19.01■□□□□ 0.63
CAPN1-227ENST00000533909 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
CAPN1-227ENST00000533909 PNPLA6Q8IY17 1366 aa18.99■□□□□ 0.63
CAPN1-227ENST00000533909 SRPK2P78362 688 aaKnown RBP18.99■□□□□ 0.63
CAPN1-227ENST00000533909 KRT28Q7Z3Y7 464 aa18.99■□□□□ 0.63
CAPN1-227ENST00000533909 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
CAPN1-227ENST00000533909 NGDNQ8NEJ9 315 aaKnown RBP18.98■□□□□ 0.63
CAPN1-227ENST00000533909 NUDT16Q96DE0 195 aaKnown RBP18.98■□□□□ 0.63
CAPN1-227ENST00000533909 RGPD8O14715 1765 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-227ENST00000533909 PXDNQ92626 1479 aa18.97■□□□□ 0.63
CAPN1-227ENST00000533909 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
CAPN1-227ENST00000533909 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
CAPN1-227ENST00000533909 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
CAPN1-227ENST00000533909 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
CAPN1-227ENST00000533909 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
CAPN1-227ENST00000533909 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
CAPN1-227ENST00000533909 EVC2Q86UK5 1308 aa18.95■□□□□ 0.62
CAPN1-227ENST00000533909 LRP6O75581 1613 aa18.94■□□□□ 0.62
CAPN1-227ENST00000533909 ATP7BP35670 1465 aa18.93■□□□□ 0.62
CAPN1-227ENST00000533909 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
CAPN1-227ENST00000533909 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
CAPN1-227ENST00000533909 ITSN1Q15811 1721 aa18.93■□□□□ 0.62
CAPN1-227ENST00000533909 ADAMTS2O95450 1211 aa18.92■□□□□ 0.62
CAPN1-227ENST00000533909 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-227ENST00000533909 SPATA31A3Q5VYP0 1347 aa18.92■□□□□ 0.62
CAPN1-227ENST00000533909 TNS3Q68CZ2 1445 aa18.91■□□□□ 0.62
CAPN1-227ENST00000533909 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-227ENST00000533909 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
CAPN1-227ENST00000533909 C8orf37Q96NL8 207 aa18.9■□□□□ 0.62
CAPN1-227ENST00000533909 ILDR2Q71H61 639 aa18.89■□□□□ 0.61
CAPN1-227ENST00000533909 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
CAPN1-227ENST00000533909 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
CAPN1-227ENST00000533909 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-227ENST00000533909 NGLY1Q96IV0 654 aa18.88■□□□□ 0.61
CAPN1-227ENST00000533909 PPIP5K1Q6PFW1 1433 aa18.87■□□□□ 0.61
CAPN1-227ENST00000533909 COL22A1Q8NFW1 1626 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-227ENST00000533909 ACEP12821 1306 aa18.86■□□□□ 0.61
CAPN1-227ENST00000533909 RGS17Q9UGC6 210 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-227ENST00000533909 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
CAPN1-227ENST00000533909 TOPAZ1Q8N9V7 1692 aa18.85■□□□□ 0.61
CAPN1-227ENST00000533909 SBNO2Q9Y2G9 1366 aa18.84■□□□□ 0.61
CAPN1-227ENST00000533909 AFF2P51816 1311 aa18.84■□□□□ 0.61
CAPN1-227ENST00000533909 CABP1Q9NZU7 370 aa18.84■□□□□ 0.61
CAPN1-227ENST00000533909 SLC24A1O60721 1099 aa18.83■□□□□ 0.6
CAPN1-227ENST00000533909 POLR3AO14802 1390 aaPredicted RBP18.82■□□□□ 0.6
CAPN1-227ENST00000533909 ATAD2Q6PL18 1390 aa18.82■□□□□ 0.6
CAPN1-227ENST00000533909 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
CAPN1-227ENST00000533909 USP47Q96K76 1375 aa18.81■□□□□ 0.6
CAPN1-227ENST00000533909 POTEAQ6S8J7 498 aa18.81■□□□□ 0.6
CAPN1-227ENST00000533909 CABLES1Q8TDN4 633 aa18.81■□□□□ 0.6
CAPN1-227ENST00000533909 TMC1Q8TDI8 760 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms