RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 PRAM1Q96QH2 718 aa25.11■■□□□ 1.61
NXF1-217ENST00000533671 PHLPP1O60346 1717 aa25.11■■□□□ 1.61
NXF1-217ENST00000533671 MST1RQ04912 1400 aa25.11■■□□□ 1.61
NXF1-217ENST00000533671 DLC1Q96QB1 1528 aa25.1■■□□□ 1.61
NXF1-217ENST00000533671 CDC42BPGQ6DT37 1551 aa25.07■■□□□ 1.6
NXF1-217ENST00000533671 BRINP3Q76B58 766 aa25.07■■□□□ 1.6
NXF1-217ENST00000533671 NBPF1Q3BBV0 1214 aa25.05■■□□□ 1.6
NXF1-217ENST00000533671 C1orf167Q5SNV9 1468 aa25.04■■□□□ 1.6
NXF1-217ENST00000533671 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
NXF1-217ENST00000533671 NUTM2FA1L443 756 aa25.03■■□□□ 1.6
NXF1-217ENST00000533671 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
NXF1-217ENST00000533671 FMN2Q9NZ56 1722 aa25■■□□□ 1.59
NXF1-217ENST00000533671 MINK1Q8N4C8 1332 aaPredicted RBP25■■□□□ 1.59
NXF1-217ENST00000533671 AHDC1Q5TGY3 1603 aaPredicted RBP25■■□□□ 1.59
NXF1-217ENST00000533671 ESCO1Q5FWF5 840 aa24.99■■□□□ 1.59
NXF1-217ENST00000533671 CCER1Q8TC90 406 aaPredicted RBP24.99■■□□□ 1.59
NXF1-217ENST00000533671 ORAI2Q96SN7 254 aa24.99■■□□□ 1.59
NXF1-217ENST00000533671 HIRIP3Q9BW71 556 aaPredicted RBP24.98■■□□□ 1.59
NXF1-217ENST00000533671 ROCK2O75116 1388 aaKnown RBP24.97■■□□□ 1.59
NXF1-217ENST00000533671 NHSL1Q5SYE7 1610 aa24.97■■□□□ 1.59
NXF1-217ENST00000533671 CLSPNQ9HAW4 1339 aa24.96■■□□□ 1.59
NXF1-217ENST00000533671 COL16A1Q07092 1604 aaPredicted RBP24.96■■□□□ 1.59
NXF1-217ENST00000533671 RGPD8O14715 1765 aaPredicted RBP24.95■■□□□ 1.59
NXF1-217ENST00000533671 NBPF8Q3BBV2 869 aa24.94■■□□□ 1.58
NXF1-217ENST00000533671 ADGRB2O60241 1585 aa24.93■■□□□ 1.58
NXF1-217ENST00000533671 DDX17Q92841 729 aaKnown RBP24.93■■□□□ 1.58
NXF1-217ENST00000533671 JCADQ9P266 1359 aa24.93■■□□□ 1.58
NXF1-217ENST00000533671 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
NXF1-217ENST00000533671 EIF3AQ14152 1382 aaKnown RBP24.91■■□□□ 1.58
NXF1-217ENST00000533671 MED1Q15648 1581 aaPredicted RBP24.9■■□□□ 1.58
NXF1-217ENST00000533671 CENPJQ9HC77 1338 aaPredicted RBP24.89■■□□□ 1.58
NXF1-217ENST00000533671 WASLO00401 505 aaPredicted RBP24.89■■□□□ 1.58
NXF1-217ENST00000533671 LRRC59Q96AG4 307 aaKnown RBP24.89■■□□□ 1.58
NXF1-217ENST00000533671 NPHP3Q7Z494 1330 aa24.88■■□□□ 1.57
NXF1-217ENST00000533671 KIF1AQ12756 1690 aa24.88■■□□□ 1.57
NXF1-217ENST00000533671 QRICH2Q9H0J4 1663 aa24.88■■□□□ 1.57
NXF1-217ENST00000533671 FOXO3O43524 673 aa24.87■■□□□ 1.57
NXF1-217ENST00000533671 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
NXF1-217ENST00000533671 ANKARQ7Z5J8 1434 aa24.86■■□□□ 1.57
NXF1-217ENST00000533671 SHPRHQ149N8 1683 aa24.85■■□□□ 1.57
NXF1-217ENST00000533671 PHF23Q9BUL5 403 aaPredicted RBP24.85■■□□□ 1.57
NXF1-217ENST00000533671 PHF8Q9UPP1 1060 aa24.85■■□□□ 1.57
NXF1-217ENST00000533671 RALGAPBQ86X10 1494 aa24.84■■□□□ 1.57
NXF1-217ENST00000533671 TIMELESSQ9UNS1 1208 aa24.84■■□□□ 1.57
NXF1-217ENST00000533671 TULP4Q9NRJ4 1543 aa24.84■■□□□ 1.57
NXF1-217ENST00000533671 CDK19Q9BWU1 502 aa24.83■■□□□ 1.57
NXF1-217ENST00000533671 USP32Q8NFA0 1604 aa24.83■■□□□ 1.56
NXF1-217ENST00000533671 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
NXF1-217ENST00000533671 SOS2Q07890 1332 aaPredicted RBP24.82■■□□□ 1.56
NXF1-217ENST00000533671 GPRASP1Q5JY77 1395 aa24.81■■□□□ 1.56
NXF1-217ENST00000533671 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
NXF1-217ENST00000533671 PMFBP1Q8TBY8 1022 aa24.81■■□□□ 1.56
NXF1-217ENST00000533671 SPATA31A6Q5VVP1 1343 aa24.81■■□□□ 1.56
NXF1-217ENST00000533671 NUTM2BA6NNL0 878 aaPredicted RBP24.79■■□□□ 1.56
NXF1-217ENST00000533671 NUTM2EB1AL46 878 aaPredicted RBP24.79■■□□□ 1.56
NXF1-217ENST00000533671 SRPK2P78362 688 aaKnown RBP24.79■■□□□ 1.56
NXF1-217ENST00000533671 NUTM2AQ8IVF1 878 aaPredicted RBP24.79■■□□□ 1.56
NXF1-217ENST00000533671 PSME1Q06323 249 aa24.78■■□□□ 1.56
NXF1-217ENST00000533671 MEX3CQ5U5Q3 659 aaKnown RBP24.78■■□□□ 1.56
NXF1-217ENST00000533671 NUDT16Q96DE0 195 aaKnown RBP24.78■■□□□ 1.56
NXF1-217ENST00000533671 KRT28Q7Z3Y7 464 aa24.77■■□□□ 1.56
NXF1-217ENST00000533671 PRR36Q9H6K5 1346 aa24.77■■□□□ 1.56
NXF1-217ENST00000533671 PXDNQ92626 1479 aa24.76■■□□□ 1.55
NXF1-217ENST00000533671 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
NXF1-217ENST00000533671 EVC2Q86UK5 1308 aa24.75■■□□□ 1.55
NXF1-217ENST00000533671 PNPLA6Q8IY17 1366 aa24.75■■□□□ 1.55
NXF1-217ENST00000533671 ATP7BP35670 1465 aa24.73■■□□□ 1.55
NXF1-217ENST00000533671 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
NXF1-217ENST00000533671 CCDC61Q9Y6R9 512 aa24.71■■□□□ 1.55
NXF1-217ENST00000533671 LMOD2Q6P5Q4 547 aa24.7■■□□□ 1.54
NXF1-217ENST00000533671 TOPAZ1Q8N9V7 1692 aa24.69■■□□□ 1.54
NXF1-217ENST00000533671 LRP6O75581 1613 aa24.68■■□□□ 1.54
NXF1-217ENST00000533671 SPATA31A3Q5VYP0 1347 aa24.68■■□□□ 1.54
NXF1-217ENST00000533671 COL22A1Q8NFW1 1626 aaPredicted RBP24.66■■□□□ 1.54
NXF1-217ENST00000533671 SBNO1A3KN83 1393 aa24.66■■□□□ 1.54
NXF1-217ENST00000533671 PAK3O75914 559 aaPredicted RBP24.65■■□□□ 1.54
NXF1-217ENST00000533671 TNS3Q68CZ2 1445 aa24.65■■□□□ 1.54
NXF1-217ENST00000533671 PPIP5K1Q6PFW1 1433 aa24.65■■□□□ 1.54
NXF1-217ENST00000533671 ADAMTS2O95450 1211 aa24.64■■□□□ 1.54
NXF1-217ENST00000533671 ACEP12821 1306 aa24.63■■□□□ 1.53
NXF1-217ENST00000533671 PLEKHG3A1L390 1219 aa24.63■■□□□ 1.53
NXF1-217ENST00000533671 PLEKHG5O94827 1062 aa24.63■■□□□ 1.53
NXF1-217ENST00000533671 HAP1P54257 671 aaPredicted RBP24.63■■□□□ 1.53
NXF1-217ENST00000533671 SBNO2Q9Y2G9 1366 aa24.63■■□□□ 1.53
NXF1-217ENST00000533671 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
NXF1-217ENST00000533671 ARHGEF10O15013 1369 aa24.62■■□□□ 1.53
NXF1-217ENST00000533671 TRPM3Q9HCF6 1732 aaPredicted RBP24.61■■□□□ 1.53
NXF1-217ENST00000533671 C8orf37Q96NL8 207 aa24.61■■□□□ 1.53
NXF1-217ENST00000533671 USP47Q96K76 1375 aa24.6■■□□□ 1.53
NXF1-217ENST00000533671 CABP1Q9NZU7 370 aa24.6■■□□□ 1.53
NXF1-217ENST00000533671 POLR3AO14802 1390 aaPredicted RBP24.59■■□□□ 1.53
NXF1-217ENST00000533671 ATAD2Q6PL18 1390 aa24.59■■□□□ 1.53
NXF1-217ENST00000533671 SLC24A1O60721 1099 aa24.59■■□□□ 1.53
NXF1-217ENST00000533671 NGLY1Q96IV0 654 aa24.57■■□□□ 1.52
NXF1-217ENST00000533671 RGS17Q9UGC6 210 aaPredicted RBP24.57■■□□□ 1.52
NXF1-217ENST00000533671 MARF1Q9Y4F3 1742 aaKnown RBP24.57■■□□□ 1.52
NXF1-217ENST00000533671 ALS2Q96Q42 1657 aa24.56■■□□□ 1.52
NXF1-217ENST00000533671 ZNF772Q68DY9 489 aaPredicted RBP24.56■■□□□ 1.52
NXF1-217ENST00000533671 ILDR2Q71H61 639 aa24.56■■□□□ 1.52
NXF1-217ENST00000533671 AFF2P51816 1311 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms