RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 POTEAQ6S8J7 498 aa23.27■■□□□ 1.32
LDLRAD3-205ENST00000532490 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
LDLRAD3-205ENST00000532490 ORAI2Q96SN7 254 aa23.26■■□□□ 1.31
LDLRAD3-205ENST00000532490 CDC42BPGQ6DT37 1551 aa23.26■■□□□ 1.31
LDLRAD3-205ENST00000532490 PLEKHH1Q9ULM0 1364 aa23.26■■□□□ 1.31
LDLRAD3-205ENST00000532490 LRRC59Q96AG4 307 aaKnown RBP23.24■■□□□ 1.31
LDLRAD3-205ENST00000532490 SIRT1Q96EB6 747 aa23.24■■□□□ 1.31
LDLRAD3-205ENST00000532490 SOS2Q07890 1332 aaPredicted RBP23.21■■□□□ 1.31
LDLRAD3-205ENST00000532490 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
LDLRAD3-205ENST00000532490 PNPLA6Q8IY17 1366 aa23.19■■□□□ 1.3
LDLRAD3-205ENST00000532490 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
LDLRAD3-205ENST00000532490 ADGRB1O14514 1584 aa23.17■■□□□ 1.3
LDLRAD3-205ENST00000532490 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
LDLRAD3-205ENST00000532490 STAC3Q96MF2 364 aa23.16■■□□□ 1.3
LDLRAD3-205ENST00000532490 NUTM2BA6NNL0 878 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-205ENST00000532490 NUTM2EB1AL46 878 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-205ENST00000532490 ESCO1Q5FWF5 840 aa23.15■■□□□ 1.3
LDLRAD3-205ENST00000532490 NUTM2AQ8IVF1 878 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-205ENST00000532490 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
LDLRAD3-205ENST00000532490 DLC1Q96QB1 1528 aa23.14■■□□□ 1.3
LDLRAD3-205ENST00000532490 FMN2Q9NZ56 1722 aa23.14■■□□□ 1.3
LDLRAD3-205ENST00000532490 NUTM2FA1L443 756 aa23.12■■□□□ 1.29
LDLRAD3-205ENST00000532490 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
LDLRAD3-205ENST00000532490 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
LDLRAD3-205ENST00000532490 PXDNQ92626 1479 aa23.11■■□□□ 1.29
LDLRAD3-205ENST00000532490 NPHP3Q7Z494 1330 aa23.1■■□□□ 1.29
LDLRAD3-205ENST00000532490 FOXO3O43524 673 aa23.09■■□□□ 1.29
LDLRAD3-205ENST00000532490 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.283e-6■□□□□ 11.2
LDLRAD3-205ENST00000532490 COL22A1Q8NFW1 1626 aaPredicted RBP23.07■■□□□ 1.28
LDLRAD3-205ENST00000532490 TRAK1Q9UPV9 953 aa23.06■■□□□ 1.28
LDLRAD3-205ENST00000532490 RGPD8O14715 1765 aaPredicted RBP23.06■■□□□ 1.28
LDLRAD3-205ENST00000532490 AFF2P51816 1311 aa23.06■■□□□ 1.28
LDLRAD3-205ENST00000532490 POGKQ9P215 609 aa23.05■■□□□ 1.28
LDLRAD3-205ENST00000532490 XPCQ01831 940 aaPredicted RBP23.04■■□□□ 1.28
LDLRAD3-205ENST00000532490 ADGRB2O60241 1585 aa23.04■■□□□ 1.28
LDLRAD3-205ENST00000532490 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
LDLRAD3-205ENST00000532490 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
LDLRAD3-205ENST00000532490 ADAMTS2O95450 1211 aa23.01■■□□□ 1.27
LDLRAD3-205ENST00000532490 USP32Q8NFA0 1604 aa23■■□□□ 1.27
LDLRAD3-205ENST00000532490 PHF8Q9UPP1 1060 aa23■■□□□ 1.27
LDLRAD3-205ENST00000532490 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
LDLRAD3-205ENST00000532490 KRT28Q7Z3Y7 464 aa22.98■■□□□ 1.27
LDLRAD3-205ENST00000532490 SPATA31A3Q5VYP0 1347 aa22.98■■□□□ 1.27
LDLRAD3-205ENST00000532490 ARHGEF28Q8N1W1 1705 aaKnown RBP22.97■■□□□ 1.27
LDLRAD3-205ENST00000532490 KIAA1210Q9ULL0 1709 aa22.97■■□□□ 1.27
LDLRAD3-205ENST00000532490 RXRBP28702 533 aa22.97■■□□□ 1.27
LDLRAD3-205ENST00000532490 NGLY1Q96IV0 654 aa22.97■■□□□ 1.27
LDLRAD3-205ENST00000532490 HIRIP3Q9BW71 556 aaPredicted RBP22.97■■□□□ 1.27
LDLRAD3-205ENST00000532490 MINK1Q8N4C8 1332 aaPredicted RBP22.96■■□□□ 1.27
LDLRAD3-205ENST00000532490 FNBP4Q8N3X1 1017 aaPredicted RBP22.95■■□□□ 1.26
LDLRAD3-205ENST00000532490 QTRT2Q9H974 415 aaKnown RBP22.95■■□□□ 1.26
LDLRAD3-205ENST00000532490 CDK12Q9NYV4 1490 aaPredicted RBP22.94■■□□□ 1.26
LDLRAD3-205ENST00000532490 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
LDLRAD3-205ENST00000532490 WASLO00401 505 aaPredicted RBP22.94■■□□□ 1.26
LDLRAD3-205ENST00000532490 NBPF1Q3BBV0 1214 aa22.93■■□□□ 1.26
LDLRAD3-205ENST00000532490 TULP4Q9NRJ4 1543 aa22.92■■□□□ 1.26
LDLRAD3-205ENST00000532490 MARF1Q9Y4F3 1742 aaKnown RBP22.91■■□□□ 1.26
LDLRAD3-205ENST00000532490 SBNO1A3KN83 1393 aa22.91■■□□□ 1.26
LDLRAD3-205ENST00000532490 PSME1Q06323 249 aa22.91■■□□□ 1.26
LDLRAD3-205ENST00000532490 PMFBP1Q8TBY8 1022 aa22.91■■□□□ 1.26
LDLRAD3-205ENST00000532490 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
LDLRAD3-205ENST00000532490 TNS3Q68CZ2 1445 aa22.91■■□□□ 1.26
LDLRAD3-205ENST00000532490 EIF3AQ14152 1382 aaKnown RBP22.9■■□□□ 1.26
LDLRAD3-205ENST00000532490 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
LDLRAD3-205ENST00000532490 L3MBTL2Q969R5 705 aa22.9■■□□□ 1.26
LDLRAD3-205ENST00000532490 USP21Q9UK80 565 aa22.9■■□□□ 1.26
LDLRAD3-205ENST00000532490 BCL9LQ86UU0 1499 aa22.87■■□□□ 1.25
LDLRAD3-205ENST00000532490 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
LDLRAD3-205ENST00000532490 RGS12O14924 1447 aa22.85■■□□□ 1.25
LDLRAD3-205ENST00000532490 ATRNO75882 1429 aa22.85■■□□□ 1.25
LDLRAD3-205ENST00000532490 TRPC5Q9UL62 973 aaPredicted RBP22.85■■□□□ 1.25
LDLRAD3-205ENST00000532490 ATP7BP35670 1465 aa22.84■■□□□ 1.25
LDLRAD3-205ENST00000532490 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
LDLRAD3-205ENST00000532490 CDK19Q9BWU1 502 aa22.83■■□□□ 1.25
LDLRAD3-205ENST00000532490 ARHGEF10O15013 1369 aa22.83■■□□□ 1.25
LDLRAD3-205ENST00000532490 CABLES1Q8TDN4 633 aa22.82■■□□□ 1.24
LDLRAD3-205ENST00000532490 UPF1Q92900 1129 aaKnown RBP eCLIP22.82■■□□□ 1.24
LDLRAD3-205ENST00000532490 SLIT2O94813 1529 aa22.82■■□□□ 1.24
LDLRAD3-205ENST00000532490 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
LDLRAD3-205ENST00000532490 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
LDLRAD3-205ENST00000532490 ABCA3Q99758 1704 aa22.8■■□□□ 1.24
LDLRAD3-205ENST00000532490 GPRASP1Q5JY77 1395 aa22.8■■□□□ 1.24
LDLRAD3-205ENST00000532490 ITSN1Q15811 1721 aa22.79■■□□□ 1.24
LDLRAD3-205ENST00000532490 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.79■■□□□ 1.24
LDLRAD3-205ENST00000532490 LMOD2Q6P5Q4 547 aa22.78■■□□□ 1.24
LDLRAD3-205ENST00000532490 NGDNQ8NEJ9 315 aaKnown RBP22.78■■□□□ 1.24
LDLRAD3-205ENST00000532490 TRPM1Q7Z4N2 1603 aa22.77■■□□□ 1.24
LDLRAD3-205ENST00000532490 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
LDLRAD3-205ENST00000532490 CENPJQ9HC77 1338 aaPredicted RBP22.77■■□□□ 1.24
LDLRAD3-205ENST00000532490 UNC5CLQ8IV45 518 aa22.76■■□□□ 1.23
LDLRAD3-205ENST00000532490 CCDC61Q9Y6R9 512 aa22.75■■□□□ 1.23
LDLRAD3-205ENST00000532490 PLEKHG3A1L390 1219 aa22.74■■□□□ 1.23
LDLRAD3-205ENST00000532490 PLEKHG5O94827 1062 aa22.74■■□□□ 1.23
LDLRAD3-205ENST00000532490 HAP1P54257 671 aaPredicted RBP22.74■■□□□ 1.23
LDLRAD3-205ENST00000532490 GJD4Q96KN9 370 aaPredicted RBP22.74■■□□□ 1.23
LDLRAD3-205ENST00000532490 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
LDLRAD3-205ENST00000532490 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
LDLRAD3-205ENST00000532490 FAM83GA6ND36 823 aa22.72■■□□□ 1.23
LDLRAD3-205ENST00000532490 QRICH2Q9H0J4 1663 aa22.71■■□□□ 1.23
LDLRAD3-205ENST00000532490 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms