RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 SHPRHQ149N8 1683 aa33.43■■■□□ 2.94
PPP1CA-207ENST00000532279 DHX57Q6P158 1386 aaKnown RBP33.43■■■□□ 2.94
PPP1CA-207ENST00000532279 ORAI2Q96SN7 254 aa33.39■■■□□ 2.94
PPP1CA-207ENST00000532279 SOCS7O14512 581 aa33.38■■■□□ 2.93
PPP1CA-207ENST00000532279 RGS17Q9UGC6 210 aaPredicted RBP33.37■■■□□ 2.93
PPP1CA-207ENST00000532279 SPATA31A6Q5VVP1 1343 aa33.36■■■□□ 2.93
PPP1CA-207ENST00000532279 ADGRB1O14514 1584 aa33.34■■■□□ 2.93
PPP1CA-207ENST00000532279 LRP6O75581 1613 aa33.34■■■□□ 2.93
PPP1CA-207ENST00000532279 NUTM2FA1L443 756 aa33.33■■■□□ 2.93
PPP1CA-207ENST00000532279 SIRT1Q96EB6 747 aa33.33■■■□□ 2.93
PPP1CA-207ENST00000532279 STAC3Q96MF2 364 aa33.32■■■□□ 2.92
PPP1CA-207ENST00000532279 FMN2Q9NZ56 1722 aa33.31■■■□□ 2.92
PPP1CA-207ENST00000532279 SAFB2Q14151 953 aaKnown RBP eCLIP33.31■■■□□ 2.92
PPP1CA-207ENST00000532279 LRRC59Q96AG4 307 aaKnown RBP33.31■■■□□ 2.92
PPP1CA-207ENST00000532279 ESCO1Q5FWF5 840 aa33.3■■■□□ 2.92
PPP1CA-207ENST00000532279 PRAM1Q96QH2 718 aa33.3■■■□□ 2.92
PPP1CA-207ENST00000532279 DLC1Q96QB1 1528 aa33.29■■■□□ 2.92
PPP1CA-207ENST00000532279 MEX3CQ5U5Q3 659 aaKnown RBP33.29■■■□□ 2.92
PPP1CA-207ENST00000532279 NUTM2BA6NNL0 878 aaPredicted RBP33.28■■■□□ 2.92
PPP1CA-207ENST00000532279 NUTM2EB1AL46 878 aaPredicted RBP33.28■■■□□ 2.92
PPP1CA-207ENST00000532279 NUTM2AQ8IVF1 878 aaPredicted RBP33.28■■■□□ 2.92
PPP1CA-207ENST00000532279 TRAK1Q9UPV9 953 aa33.27■■■□□ 2.92
PPP1CA-207ENST00000532279 POGKQ9P215 609 aa33.26■■■□□ 2.91
PPP1CA-207ENST00000532279 RGPD8O14715 1765 aaPredicted RBP33.24■■■□□ 2.91
PPP1CA-207ENST00000532279 PNPLA6Q8IY17 1366 aa33.23■■■□□ 2.91
PPP1CA-207ENST00000532279 SOS2Q07890 1332 aaPredicted RBP33.23■■■□□ 2.91
PPP1CA-207ENST00000532279 POTEAQ6S8J7 498 aa33.22■■■□□ 2.91
PPP1CA-207ENST00000532279 NPHP3Q7Z494 1330 aa33.19■■■□□ 2.9
PPP1CA-207ENST00000532279 FOXO3O43524 673 aa33.18■■■□□ 2.9
PPP1CA-207ENST00000532279 XPCQ01831 940 aaPredicted RBP33.17■■■□□ 2.9
PPP1CA-207ENST00000532279 KIF1AQ12756 1690 aa33.17■■■□□ 2.9
PPP1CA-207ENST00000532279 ARHGEF28Q8N1W1 1705 aaKnown RBP33.16■■■□□ 2.9
PPP1CA-207ENST00000532279 SIN3AQ96ST3 1273 aa33.16■■■□□ 2.9
PPP1CA-207ENST00000532279 KIAA1210Q9ULL0 1709 aa33.16■■■□□ 2.9
PPP1CA-207ENST00000532279 PXDNQ92626 1479 aa33.15■■■□□ 2.9
PPP1CA-207ENST00000532279 ADGRB2O60241 1585 aa33.14■■■□□ 2.9
PPP1CA-207ENST00000532279 HIRIP3Q9BW71 556 aaPredicted RBP33.14■■■□□ 2.9
PPP1CA-207ENST00000532279 MINK1Q8N4C8 1332 aaPredicted RBP33.13■■■□□ 2.89
PPP1CA-207ENST00000532279 TRIM26Q12899 539 aaPredicted RBP33.11■■■□□ 2.89
PPP1CA-207ENST00000532279 NEUROD1Q13562 356 aa33.1■■■□□ 2.89
PPP1CA-207ENST00000532279 USP32Q8NFA0 1604 aa33.1■■■□□ 2.89
PPP1CA-207ENST00000532279 L3MBTL2Q969R5 705 aa33.08■■■□□ 2.89
PPP1CA-207ENST00000532279 COL22A1Q8NFW1 1626 aaPredicted RBP33.07■■■□□ 2.88
PPP1CA-207ENST00000532279 ZNF772Q68DY9 489 aaPredicted RBP33.07■■■□□ 2.88
PPP1CA-207ENST00000532279 PHF8Q9UPP1 1060 aa33.07■■■□□ 2.88
PPP1CA-207ENST00000532279 NBPF1Q3BBV0 1214 aa33.06■■■□□ 2.88
PPP1CA-207ENST00000532279 C8orf37Q96NL8 207 aa33.06■■■□□ 2.88
PPP1CA-207ENST00000532279 ADAMTS2O95450 1211 aa33.05■■■□□ 2.88
PPP1CA-207ENST00000532279 AFF2P51816 1311 aa33.03■■■□□ 2.88
PPP1CA-207ENST00000532279 ANKARQ7Z5J8 1434 aa33.03■■■□□ 2.88
PPP1CA-207ENST00000532279 KRT28Q7Z3Y7 464 aa33.01■■■□□ 2.87
PPP1CA-207ENST00000532279 WASLO00401 505 aaPredicted RBP33■■■□□ 2.87
PPP1CA-207ENST00000532279 TULP4Q9NRJ4 1543 aa33■■■□□ 2.87
PPP1CA-207ENST00000532279 EIF3AQ14152 1382 aaKnown RBP32.99■■■□□ 2.87
PPP1CA-207ENST00000532279 PMFBP1Q8TBY8 1022 aa32.99■■■□□ 2.87
PPP1CA-207ENST00000532279 SPATA31A3Q5VYP0 1347 aa32.97■■■□□ 2.87
PPP1CA-207ENST00000532279 PRR36Q9H6K5 1346 aa32.97■■■□□ 2.87
PPP1CA-207ENST00000532279 NGLY1Q96IV0 654 aa32.96■■■□□ 2.87
PPP1CA-207ENST00000532279 PSME1Q06323 249 aa32.94■■■□□ 2.86
PPP1CA-207ENST00000532279 MARF1Q9Y4F3 1742 aaKnown RBP32.94■■■□□ 2.86
PPP1CA-207ENST00000532279 TRPM1Q7Z4N2 1603 aa32.93■■■□□ 2.86
PPP1CA-207ENST00000532279 TNS3Q68CZ2 1445 aa32.92■■■□□ 2.86
PPP1CA-207ENST00000532279 ITSN1Q15811 1721 aa32.91■■■□□ 2.86
PPP1CA-207ENST00000532279 RXRBP28702 533 aa32.88■■■□□ 2.85
PPP1CA-207ENST00000532279 LMOD2Q6P5Q4 547 aa32.88■■■□□ 2.85
PPP1CA-207ENST00000532279 CDK19Q9BWU1 502 aa32.88■■■□□ 2.85
PPP1CA-207ENST00000532279 ATP7BP35670 1465 aa32.87■■■□□ 2.85
PPP1CA-207ENST00000532279 SBNO1A3KN83 1393 aa32.87■■■□□ 2.85
PPP1CA-207ENST00000532279 PLEKHG5O94827 1062 aa32.87■■■□□ 2.85
PPP1CA-207ENST00000532279 QRICH2Q9H0J4 1663 aa32.87■■■□□ 2.85
PPP1CA-207ENST00000532279 QTRT2Q9H974 415 aaKnown RBP32.86■■■□□ 2.85
PPP1CA-207ENST00000532279 TRPM3Q9HCF6 1732 aaPredicted RBP32.85■■■□□ 2.85
PPP1CA-207ENST00000532279 CENPJQ9HC77 1338 aaPredicted RBP32.85■■■□□ 2.85
PPP1CA-207ENST00000532279 NUDT16Q96DE0 195 aaKnown RBP32.85■■■□□ 2.85
PPP1CA-207ENST00000532279 GPRASP1Q5JY77 1395 aa32.84■■■□□ 2.85
PPP1CA-207ENST00000532279 USP21Q9UK80 565 aa32.84■■■□□ 2.85
PPP1CA-207ENST00000532279 NGDNQ8NEJ9 315 aaKnown RBP32.83■■■□□ 2.85
PPP1CA-207ENST00000532279 ROCK2O75116 1388 aaKnown RBP32.83■■■□□ 2.85
PPP1CA-207ENST00000532279 HAP1P54257 671 aaPredicted RBP32.81■■■□□ 2.84
PPP1CA-207ENST00000532279 TOPAZ1Q8N9V7 1692 aa32.81■■■□□ 2.84
PPP1CA-207ENST00000532279 ARHGEF10O15013 1369 aa32.81■■■□□ 2.84
PPP1CA-207ENST00000532279 ABCA3Q99758 1704 aa32.8■■■□□ 2.84
PPP1CA-207ENST00000532279 FNBP4Q8N3X1 1017 aaPredicted RBP32.8■■■□□ 2.84
PPP1CA-207ENST00000532279 CABLES1Q8TDN4 633 aa32.8■■■□□ 2.84
PPP1CA-207ENST00000532279 TONSLQ96HA7 1378 aa32.8■■■□□ 2.84
PPP1CA-207ENST00000532279 NBPF8Q3BBV2 869 aa32.79■■■□□ 2.84
PPP1CA-207ENST00000532279 ALS2Q96Q42 1657 aa32.78■■■□□ 2.84
PPP1CA-207ENST00000532279 RBM6P78332 1123 aaKnown RBP32.76■■■□□ 2.83
PPP1CA-207ENST00000532279 CDK12Q9NYV4 1490 aaPredicted RBP32.75■■■□□ 2.83
PPP1CA-207ENST00000532279 SRPK2P78362 688 aaKnown RBP32.75■■■□□ 2.83
PPP1CA-207ENST00000532279 PAK3O75914 559 aaPredicted RBP32.74■■■□□ 2.83
PPP1CA-207ENST00000532279 TRPC5Q9UL62 973 aaPredicted RBP32.74■■■□□ 2.83
PPP1CA-207ENST00000532279 CCDC61Q9Y6R9 512 aa32.74■■■□□ 2.83
PPP1CA-207ENST00000532279 BCL9LQ86UU0 1499 aa32.73■■■□□ 2.83
PPP1CA-207ENST00000532279 CABP2Q9NPB3 220 aa32.72■■■□□ 2.83
PPP1CA-207ENST00000532279 RGS12O14924 1447 aa32.7■■■□□ 2.83
PPP1CA-207ENST00000532279 ATRNO75882 1429 aa32.7■■■□□ 2.83
PPP1CA-207ENST00000532279 ACEP12821 1306 aa32.69■■■□□ 2.82
PPP1CA-207ENST00000532279 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.68■■■□□ 2.82
PPP1CA-207ENST00000532279 PLCH1Q4KWH8 1693 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms