RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 WAPLQ7Z5K2 1190 aa27.67■■■□□ 2.02
UBXN1-211ENST00000531056 SIRT1Q96EB6 747 aa27.66■■■□□ 2.02
UBXN1-211ENST00000531056 SHPRHQ149N8 1683 aa27.62■■■□□ 2.01
UBXN1-211ENST00000531056 JCADQ9P266 1359 aa27.62■■■□□ 2.01
UBXN1-211ENST00000531056 FMN2Q9NZ56 1722 aa27.62■■■□□ 2.01
UBXN1-211ENST00000531056 KIAA1210Q9ULL0 1709 aa27.61■■■□□ 2.01
UBXN1-211ENST00000531056 ILDR2Q71H61 639 aa27.57■■■□□ 2
UBXN1-211ENST00000531056 ARHGEF28Q8N1W1 1705 aaKnown RBP27.56■■■□□ 2
UBXN1-211ENST00000531056 ADGRB2O60241 1585 aa27.56■■■□□ 2
UBXN1-211ENST00000531056 PRAM1Q96QH2 718 aa27.55■■■□□ 2
UBXN1-211ENST00000531056 ORAI2Q96SN7 254 aa27.55■■■□□ 2
UBXN1-211ENST00000531056 SIN3AQ96ST3 1273 aa27.54■■■□□ 2
UBXN1-211ENST00000531056 DDX17Q92841 729 aaKnown RBP27.53■■■□□ 2
UBXN1-211ENST00000531056 TRAK1Q9UPV9 953 aa27.51■■□□□ 1.99
UBXN1-211ENST00000531056 LRP6O75581 1613 aa27.5■■□□□ 1.99
UBXN1-211ENST00000531056 PHF23Q9BUL5 403 aaPredicted RBP27.5■■□□□ 1.99
UBXN1-211ENST00000531056 SPATA31A6Q5VVP1 1343 aa27.49■■□□□ 1.99
UBXN1-211ENST00000531056 SAFB2Q14151 953 aaKnown RBP eCLIP27.49■■□□□ 1.99
UBXN1-211ENST00000531056 RGPD8O14715 1765 aaPredicted RBP27.48■■□□□ 1.99
UBXN1-211ENST00000531056 L3MBTL2Q969R5 705 aa27.48■■□□□ 1.99
UBXN1-211ENST00000531056 POGKQ9P215 609 aa27.48■■□□□ 1.99
UBXN1-211ENST00000531056 KIF1AQ12756 1690 aa27.48■■□□□ 1.99
UBXN1-211ENST00000531056 SOS2Q07890 1332 aaPredicted RBP27.46■■□□□ 1.99
UBXN1-211ENST00000531056 USP32Q8NFA0 1604 aa27.46■■□□□ 1.99
UBXN1-211ENST00000531056 ESCO1Q5FWF5 840 aa27.46■■□□□ 1.99
UBXN1-211ENST00000531056 NUTM2FA1L443 756 aa27.45■■□□□ 1.98
UBXN1-211ENST00000531056 LRRC59Q96AG4 307 aaKnown RBP27.45■■□□□ 1.98
UBXN1-211ENST00000531056 PXDNQ92626 1479 aa27.44■■□□□ 1.98
UBXN1-211ENST00000531056 NEUROD1Q13562 356 aa27.44■■□□□ 1.98
UBXN1-211ENST00000531056 TRPM1Q7Z4N2 1603 aa27.44■■□□□ 1.98
UBXN1-211ENST00000531056 PNPLA6Q8IY17 1366 aa27.44■■□□□ 1.98
UBXN1-211ENST00000531056 RGS17Q9UGC6 210 aaPredicted RBP27.43■■□□□ 1.98
UBXN1-211ENST00000531056 NPHP3Q7Z494 1330 aa27.41■■□□□ 1.98
UBXN1-211ENST00000531056 NBPF1Q3BBV0 1214 aa27.41■■□□□ 1.98
UBXN1-211ENST00000531056 ANKARQ7Z5J8 1434 aa27.41■■□□□ 1.98
UBXN1-211ENST00000531056 COL22A1Q8NFW1 1626 aaPredicted RBP27.39■■□□□ 1.98
UBXN1-211ENST00000531056 MINK1Q8N4C8 1332 aaPredicted RBP27.39■■□□□ 1.97
UBXN1-211ENST00000531056 TULP4Q9NRJ4 1543 aa27.38■■□□□ 1.97
UBXN1-211ENST00000531056 HIRIP3Q9BW71 556 aaPredicted RBP27.37■■□□□ 1.97
UBXN1-211ENST00000531056 FOXO3O43524 673 aa27.36■■□□□ 1.97
UBXN1-211ENST00000531056 EIF3AQ14152 1382 aaKnown RBP27.34■■□□□ 1.97
UBXN1-211ENST00000531056 NUTM2BA6NNL0 878 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-211ENST00000531056 NUTM2EB1AL46 878 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-211ENST00000531056 WASLO00401 505 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-211ENST00000531056 XPCQ01831 940 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-211ENST00000531056 NUTM2AQ8IVF1 878 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-211ENST00000531056 PHF8Q9UPP1 1060 aa27.32■■□□□ 1.96
UBXN1-211ENST00000531056 PRR36Q9H6K5 1346 aa27.31■■□□□ 1.96
UBXN1-211ENST00000531056 MEX3CQ5U5Q3 659 aaKnown RBP27.3■■□□□ 1.96
UBXN1-211ENST00000531056 QRICH2Q9H0J4 1663 aa27.3■■□□□ 1.96
UBXN1-211ENST00000531056 ITSN1Q15811 1721 aa27.3■■□□□ 1.96
UBXN1-211ENST00000531056 ATP7BP35670 1465 aa27.29■■□□□ 1.96
UBXN1-211ENST00000531056 POTEAQ6S8J7 498 aa27.28■■□□□ 1.96
UBXN1-211ENST00000531056 TOPAZ1Q8N9V7 1692 aa27.27■■□□□ 1.96
UBXN1-211ENST00000531056 SOCS7O14512 581 aa27.27■■□□□ 1.96
UBXN1-211ENST00000531056 TONSLQ96HA7 1378 aa27.26■■□□□ 1.95
UBXN1-211ENST00000531056 NBPF8Q3BBV2 869 aa27.26■■□□□ 1.95
UBXN1-211ENST00000531056 ROCK2O75116 1388 aaKnown RBP27.25■■□□□ 1.95
UBXN1-211ENST00000531056 TRPM3Q9HCF6 1732 aaPredicted RBP27.25■■□□□ 1.95
UBXN1-211ENST00000531056 SPATA31A3Q5VYP0 1347 aa27.24■■□□□ 1.95
UBXN1-211ENST00000531056 CENPJQ9HC77 1338 aaPredicted RBP27.24■■□□□ 1.95
UBXN1-211ENST00000531056 KRT28Q7Z3Y7 464 aa27.24■■□□□ 1.95
UBXN1-211ENST00000531056 GPRASP1Q5JY77 1395 aa27.23■■□□□ 1.95
UBXN1-211ENST00000531056 TNS3Q68CZ2 1445 aa27.23■■□□□ 1.95
UBXN1-211ENST00000531056 MARF1Q9Y4F3 1742 aaKnown RBP27.22■■□□□ 1.95
UBXN1-211ENST00000531056 PMFBP1Q8TBY8 1022 aa27.22■■□□□ 1.95
UBXN1-211ENST00000531056 SBNO1A3KN83 1393 aa27.22■■□□□ 1.95
UBXN1-211ENST00000531056 RALGAPBQ86X10 1494 aa27.2■■□□□ 1.95
UBXN1-211ENST00000531056 CDK19Q9BWU1 502 aa27.2■■□□□ 1.94
UBXN1-211ENST00000531056 NUDT16Q96DE0 195 aaKnown RBP27.19■■□□□ 1.94
UBXN1-211ENST00000531056 ABCA3Q99758 1704 aa27.19■■□□□ 1.94
UBXN1-211ENST00000531056 ALS2Q96Q42 1657 aa27.18■■□□□ 1.94
UBXN1-211ENST00000531056 PSME1Q06323 249 aa27.18■■□□□ 1.94
UBXN1-211ENST00000531056 ZNF772Q68DY9 489 aaPredicted RBP27.18■■□□□ 1.94
UBXN1-211ENST00000531056 AFF2P51816 1311 aa27.17■■□□□ 1.94
UBXN1-211ENST00000531056 C8orf37Q96NL8 207 aa27.17■■□□□ 1.94
UBXN1-211ENST00000531056 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
UBXN1-211ENST00000531056 ADAMTS2O95450 1211 aa27.16■■□□□ 1.94
UBXN1-211ENST00000531056 ARHGEF10O15013 1369 aa27.12■■□□□ 1.93
UBXN1-211ENST00000531056 POLR3AO14802 1390 aaPredicted RBP27.11■■□□□ 1.93
UBXN1-211ENST00000531056 NGDNQ8NEJ9 315 aaKnown RBP27.1■■□□□ 1.93
UBXN1-211ENST00000531056 CCDC61Q9Y6R9 512 aa27.1■■□□□ 1.93
UBXN1-211ENST00000531056 CRYBG1Q9Y4K1 1723 aa27.1■■□□□ 1.93
UBXN1-211ENST00000531056 NGLY1Q96IV0 654 aa27.08■■□□□ 1.93
UBXN1-211ENST00000531056 PLEKHG3A1L390 1219 aa27.07■■□□□ 1.92
UBXN1-211ENST00000531056 SRPK2P78362 688 aaKnown RBP27.07■■□□□ 1.92
UBXN1-211ENST00000531056 CARD11Q9BXL7 1154 aa27.07■■□□□ 1.92
UBXN1-211ENST00000531056 CABP2Q9NPB3 220 aa27.07■■□□□ 1.92
UBXN1-211ENST00000531056 CLSPNQ9HAW4 1339 aa27.07■■□□□ 1.92
UBXN1-211ENST00000531056 PPIP5K1Q6PFW1 1433 aa27.07■■□□□ 1.92
UBXN1-211ENST00000531056 FNBP4Q8N3X1 1017 aaPredicted RBP27.06■■□□□ 1.92
UBXN1-211ENST00000531056 ACEP12821 1306 aa27.05■■□□□ 1.92
UBXN1-211ENST00000531056 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
UBXN1-211ENST00000531056 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.04■■□□□ 1.92
UBXN1-211ENST00000531056 LMOD2Q6P5Q4 547 aa27.04■■□□□ 1.92
UBXN1-211ENST00000531056 EVC2Q86UK5 1308 aa27.04■■□□□ 1.92
UBXN1-211ENST00000531056 CABLES1Q8TDN4 633 aa27.03■■□□□ 1.92
UBXN1-211ENST00000531056 CDK12Q9NYV4 1490 aaPredicted RBP27.03■■□□□ 1.92
UBXN1-211ENST00000531056 BCL9LQ86UU0 1499 aa27.02■■□□□ 1.92
UBXN1-211ENST00000531056 SLIT2O94813 1529 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms