RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
SF3B2-210ENST00000530981 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
SF3B2-210ENST00000530981 DLC1Q96QB1 1528 aa13.24□□□□□ -0.29
SF3B2-210ENST00000530981 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
SF3B2-210ENST00000530981 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
SF3B2-210ENST00000530981 NUTM2FA1L443 756 aa13.22□□□□□ -0.29
SF3B2-210ENST00000530981 ATF3P18847 181 aa13.22□□□□□ -0.29
SF3B2-210ENST00000530981 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-210ENST00000530981 DCCP43146 1447 aa13.22□□□□□ -0.29
SF3B2-210ENST00000530981 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.29
SF3B2-210ENST00000530981 BRINP3Q76B58 766 aa13.21□□□□□ -0.29
SF3B2-210ENST00000530981 CADPS2Q86UW7 1296 aa13.21□□□□□ -0.29
SF3B2-210ENST00000530981 ORAI2Q96SN7 254 aa13.21□□□□□ -0.29
SF3B2-210ENST00000530981 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-210ENST00000530981 MINK1Q8N4C8 1332 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-210ENST00000530981 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
SF3B2-210ENST00000530981 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
SF3B2-210ENST00000530981 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
SF3B2-210ENST00000530981 POGKQ9P215 609 aa13.19□□□□□ -0.3
SF3B2-210ENST00000530981 USP32Q8NFA0 1604 aa13.19□□□□□ -0.3
SF3B2-210ENST00000530981 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
SF3B2-210ENST00000530981 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
SF3B2-210ENST00000530981 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
SF3B2-210ENST00000530981 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
SF3B2-210ENST00000530981 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
SF3B2-210ENST00000530981 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-210ENST00000530981 WASLO00401 505 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-210ENST00000530981 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
SF3B2-210ENST00000530981 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 QRICH2Q9H0J4 1663 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
SF3B2-210ENST00000530981 ESCO1Q5FWF5 840 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 CDK19Q9BWU1 502 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
SF3B2-210ENST00000530981 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
SF3B2-210ENST00000530981 FOXO3O43524 673 aa13.11□□□□□ -0.31
SF3B2-210ENST00000530981 TESK2Q96S53 571 aa13.1□□□□□ -0.31
SF3B2-210ENST00000530981 CABP2Q9NPB3 220 aa13.1□□□□□ -0.31
SF3B2-210ENST00000530981 ATP7BP35670 1465 aa13.1□□□□□ -0.31
SF3B2-210ENST00000530981 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
SF3B2-210ENST00000530981 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
SF3B2-210ENST00000530981 PXDNQ92626 1479 aa13.09□□□□□ -0.31
SF3B2-210ENST00000530981 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-210ENST00000530981 ST20-MTHFSA0A0A6YYL1 179 aa13.08□□□□□ -0.32
SF3B2-210ENST00000530981 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
SF3B2-210ENST00000530981 ANKARQ7Z5J8 1434 aa13.07□□□□□ -0.32
SF3B2-210ENST00000530981 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
SF3B2-210ENST00000530981 LRP6O75581 1613 aa13.05□□□□□ -0.32
SF3B2-210ENST00000530981 USP47Q96K76 1375 aa13.05□□□□□ -0.32
SF3B2-210ENST00000530981 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
SF3B2-210ENST00000530981 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
SF3B2-210ENST00000530981 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
SF3B2-210ENST00000530981 DISP3Q9P2K9 1392 aa13.03□□□□□ -0.32
SF3B2-210ENST00000530981 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
SF3B2-210ENST00000530981 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
SF3B2-210ENST00000530981 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
SF3B2-210ENST00000530981 PLEKHG3A1L390 1219 aa13.02□□□□□ -0.33
SF3B2-210ENST00000530981 CABP1Q9NZU7 370 aa13.02□□□□□ -0.33
SF3B2-210ENST00000530981 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
SF3B2-210ENST00000530981 EIF3AQ14152 1382 aaKnown RBP13.02□□□□□ -0.33
SF3B2-210ENST00000530981 JCADQ9P266 1359 aa13.02□□□□□ -0.33
SF3B2-210ENST00000530981 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-210ENST00000530981 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
SF3B2-210ENST00000530981 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
SF3B2-210ENST00000530981 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-210ENST00000530981 ACEP12821 1306 aa13.01□□□□□ -0.33
SF3B2-210ENST00000530981 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
SF3B2-210ENST00000530981 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
SF3B2-210ENST00000530981 PPIP5K1Q6PFW1 1433 aa13.01□□□□□ -0.33
SF3B2-210ENST00000530981 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
SF3B2-210ENST00000530981 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
SF3B2-210ENST00000530981 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
SF3B2-210ENST00000530981 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
SF3B2-210ENST00000530981 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
SF3B2-210ENST00000530981 PSME1Q06323 249 aa12.99□□□□□ -0.33
SF3B2-210ENST00000530981 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
SF3B2-210ENST00000530981 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
SF3B2-210ENST00000530981 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
SF3B2-210ENST00000530981 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
SF3B2-210ENST00000530981 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
SF3B2-210ENST00000530981 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
SF3B2-210ENST00000530981 SLC12A5Q9H2X9 1139 aa12.98□□□□□ -0.33
SF3B2-210ENST00000530981 ALS2Q96Q42 1657 aa12.97□□□□□ -0.33
SF3B2-210ENST00000530981 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
SF3B2-210ENST00000530981 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
SF3B2-210ENST00000530981 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
SF3B2-210ENST00000530981 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
SF3B2-210ENST00000530981 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.34
SF3B2-210ENST00000530981 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.34
SF3B2-210ENST00000530981 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
SF3B2-210ENST00000530981 SPATA31A6Q5VVP1 1343 aa12.94□□□□□ -0.34
SF3B2-210ENST00000530981 ADAMTS2O95450 1211 aa12.94□□□□□ -0.34
SF3B2-210ENST00000530981 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
SF3B2-210ENST00000530981 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
SF3B2-210ENST00000530981 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
SF3B2-210ENST00000530981 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
SF3B2-210ENST00000530981 USP6P35125 1406 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms