RNA–Protein interactions for RNA: ENST00000530958.5

ATM-215, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2 BASIC

Gene ATM, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-215ENST00000530958 CCDC34Q96HJ3 373 aa9.43□□□□□ -0.9
ATM-215ENST00000530958 CTDP1Q9Y5B0 961 aaPredicted RBP9.43□□□□□ -0.9
ATM-215ENST00000530958 SKAP1Q86WV1 359 aa9.42□□□□□ -0.9
ATM-215ENST00000530958 PPP1R1BQ9UD71 204 aaPredicted RBP9.42□□□□□ -0.9
ATM-215ENST00000530958 CCDC141Q6ZP82 1450 aa9.42□□□□□ -0.9
ATM-215ENST00000530958 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
ATM-215ENST00000530958 LRRFIP1Q32MZ4 808 aaKnown RBP9.42□□□□□ -0.9
ATM-215ENST00000530958 PROSER2Q86WR7 435 aaPredicted RBP9.42□□□□□ -0.9
ATM-215ENST00000530958 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
ATM-215ENST00000530958 THUMPD2Q9BTF0 503 aaKnown RBP9.42□□□□□ -0.9
ATM-215ENST00000530958 NUTM2BA6NNL0 878 aaPredicted RBP9.41□□□□□ -0.9
ATM-215ENST00000530958 NUTM2EB1AL46 878 aaPredicted RBP9.41□□□□□ -0.9
ATM-215ENST00000530958 GLIPR1L2Q4G1C9 344 aa9.41□□□□□ -0.9
ATM-215ENST00000530958 NUTM2AQ8IVF1 878 aaPredicted RBP9.41□□□□□ -0.9
ATM-215ENST00000530958 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
ATM-215ENST00000530958 NLRP2Q9NX02 1062 aa9.41□□□□□ -0.9
ATM-215ENST00000530958 NUP153P49790 1475 aaKnown RBP9.41□□□□□ -0.9
ATM-215ENST00000530958 EXOSC9Q06265 439 aaKnown RBP9.41□□□□□ -0.9
ATM-215ENST00000530958 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
ATM-215ENST00000530958 PTPN23Q9H3S7 1636 aa9.41□□□□□ -0.9
ATM-215ENST00000530958 KIAA2012Q0VF49 1180 aa9.4□□□□□ -0.9
ATM-215ENST00000530958 CHAF1AQ13111 956 aaPredicted RBP9.4□□□□□ -0.9
ATM-215ENST00000530958 BRD4O60885 1362 aaPredicted RBP9.4□□□□□ -0.9
ATM-215ENST00000530958 DDX58O95786 925 aaKnown RBP9.4□□□□□ -0.9
ATM-215ENST00000530958 DZIP1LQ8IYY4 767 aaKnown RBP9.4□□□□□ -0.9
ATM-215ENST00000530958 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
ATM-215ENST00000530958 PLCB2Q00722 1185 aa9.4□□□□□ -0.9
ATM-215ENST00000530958 LNPKQ9C0E8 428 aa9.4□□□□□ -0.9
ATM-215ENST00000530958 ADGRL1O94910 1474 aa9.4□□□□□ -0.9
ATM-215ENST00000530958 FKBP5Q13451 457 aaPredicted RBP9.4□□□□□ -0.9
ATM-215ENST00000530958 CHMP4CQ96CF2 233 aa9.4□□□□□ -0.9
ATM-215ENST00000530958 HSP90B1P14625 803 aaKnown RBP9.4□□□□□ -0.91
ATM-215ENST00000530958 CWC22Q9HCG8 908 aaKnown RBP9.39□□□□□ -0.91
ATM-215ENST00000530958 CUL7Q14999 1698 aa9.39□□□□□ -0.91
ATM-215ENST00000530958 TOMM22Q9NS69 142 aa9.38□□□□□ -0.91
ATM-215ENST00000530958 TSPYL4Q9UJ04 414 aa9.38□□□□□ -0.91
ATM-215ENST00000530958 ANKLE2Q86XL3 938 aa9.38□□□□□ -0.91
ATM-215ENST00000530958 ANO8Q9HCE9 1232 aaPredicted RBP9.38□□□□□ -0.91
ATM-215ENST00000530958 MARCH6O60337 910 aa9.38□□□□□ -0.91
ATM-215ENST00000530958 PTMSP20962 102 aa9.38□□□□□ -0.91
ATM-215ENST00000530958 AIMP1Q12904 312 aaKnown RBP9.38□□□□□ -0.91
ATM-215ENST00000530958 IPO9Q96P70 1041 aaKnown RBP9.37□□□□□ -0.91
ATM-215ENST00000530958 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
ATM-215ENST00000530958 C1orf115Q9H7X2 142 aa9.37□□□□□ -0.91
ATM-215ENST00000530958 SMG6Q86US8 1419 aaKnown RBP9.37□□□□□ -0.91
ATM-215ENST00000530958 CCDC61Q9Y6R9 512 aa9.37□□□□□ -0.91
ATM-215ENST00000530958 DCTN1Q14203 1278 aa9.37□□□□□ -0.91
ATM-215ENST00000530958 VPS53Q5VIR6 699 aa9.37□□□□□ -0.91
ATM-215ENST00000530958 VPS37DQ86XT2 251 aa9.37□□□□□ -0.91
ATM-215ENST00000530958 KIF3AQ9Y496 699 aa9.37□□□□□ -0.91
ATM-215ENST00000530958 DNTTIP2Q5QJE6 756 aaKnown RBP9.36□□□□□ -0.91
ATM-215ENST00000530958 RILPL2Q969X0 211 aa9.36□□□□□ -0.91
ATM-215ENST00000530958 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
ATM-215ENST00000530958 NCBP3Q53F19 620 aaKnown RBP9.36□□□□□ -0.91
ATM-215ENST00000530958 FANCAO15360 1455 aa9.36□□□□□ -0.91
ATM-215ENST00000530958 ZC3H6P61129 1189 aaKnown RBP9.36□□□□□ -0.91
ATM-215ENST00000530958 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
ATM-215ENST00000530958 NME9Q86XW9 330 aa9.36□□□□□ -0.91
ATM-215ENST00000530958 FOXD4L4Q8WXT5 416 aaPredicted RBP9.36□□□□□ -0.91
ATM-215ENST00000530958 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
ATM-215ENST00000530958 NUDT16Q96DE0 195 aaKnown RBP9.36□□□□□ -0.91
ATM-215ENST00000530958 MIS18AQ9NYP9 233 aa9.36□□□□□ -0.91
ATM-215ENST00000530958 AMER1Q5JTC6 1135 aaPredicted RBP9.35□□□□□ -0.91
ATM-215ENST00000530958 C20orf194Q5TEA3 1177 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 RASSF8Q8NHQ8 419 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 NAP1L5Q96NT1 182 aaPredicted RBP9.35□□□□□ -0.91
ATM-215ENST00000530958 RPRD2Q5VT52 1461 aaKnown RBP9.35□□□□□ -0.91
ATM-215ENST00000530958 FOXO3O43524 673 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 TPM4P67936 248 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
ATM-215ENST00000530958 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
ATM-215ENST00000530958 TCEAL9Q9UHQ7 104 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 TRAPPC8Q9Y2L5 1435 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 EMILIN1Q9Y6C2 1016 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
ATM-215ENST00000530958 ARID3AQ99856 593 aa9.34□□□□□ -0.91
ATM-215ENST00000530958 GNAI1P63096 354 aa9.34□□□□□ -0.91
ATM-215ENST00000530958 KRI1Q8N9T8 703 aaKnown RBP9.34□□□□□ -0.91
ATM-215ENST00000530958 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
ATM-215ENST00000530958 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
ATM-215ENST00000530958 MAPKBP1O60336 1514 aa9.34□□□□□ -0.91
ATM-215ENST00000530958 DDX19BQ9UMR2 479 aa9.34□□□□□ -0.91
ATM-215ENST00000530958 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
ATM-215ENST00000530958 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
ATM-215ENST00000530958 DISP3Q9P2K9 1392 aa9.33□□□□□ -0.92
ATM-215ENST00000530958 RTEL1-TNFRSF6BF6WH68 1400 aa9.33□□□□□ -0.92
ATM-215ENST00000530958 AKAP17AQ02040 695 aaKnown RBP9.33□□□□□ -0.92
ATM-215ENST00000530958 SYNE3Q6ZMZ3 975 aa9.33□□□□□ -0.92
ATM-215ENST00000530958 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
ATM-215ENST00000530958 NOS1P29475 1434 aa9.32□□□□□ -0.92
ATM-215ENST00000530958 TWISTNBQ3B726 338 aaPredicted RBP9.32□□□□□ -0.92
ATM-215ENST00000530958 AMOTL2Q9Y2J4 779 aa9.32□□□□□ -0.92
ATM-215ENST00000530958 DHX29Q7Z478 1369 aaKnown RBP9.32□□□□□ -0.92
ATM-215ENST00000530958 ASXL2Q76L83 1435 aa9.32□□□□□ -0.92
ATM-215ENST00000530958 DRC7Q8IY82 874 aa9.31□□□□□ -0.92
ATM-215ENST00000530958 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
ATM-215ENST00000530958 USHBP1Q8N6Y0 703 aa9.31□□□□□ -0.92
ATM-215ENST00000530958 MCM10Q7L590 875 aa9.31□□□□□ -0.92
ATM-215ENST00000530958 PLEKHO1Q53GL0 409 aaPredicted RBP9.3□□□□□ -0.92
ATM-215ENST00000530958 API5Q9BZZ5 524 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms