RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 SHPRHQ149N8 1683 aa27.46■■□□□ 1.99
PCNX3-203ENST00000530174 DDX17Q92841 729 aaKnown RBP27.45■■□□□ 1.98
PCNX3-203ENST00000530174 STAC3Q96MF2 364 aa27.45■■□□□ 1.98
PCNX3-203ENST00000530174 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
PCNX3-203ENST00000530174 SIRT1Q96EB6 747 aa27.44■■□□□ 1.98
PCNX3-203ENST00000530174 ORAI2Q96SN7 254 aa27.44■■□□□ 1.98
PCNX3-203ENST00000530174 SPATA31A6Q5VVP1 1343 aa27.41■■□□□ 1.98
PCNX3-203ENST00000530174 RGS17Q9UGC6 210 aaPredicted RBP27.41■■□□□ 1.98
PCNX3-203ENST00000530174 LRP6O75581 1613 aa27.4■■□□□ 1.98
PCNX3-203ENST00000530174 DLC1Q96QB1 1528 aa27.4■■□□□ 1.98
PCNX3-203ENST00000530174 SOCS7O14512 581 aa27.39■■□□□ 1.98
PCNX3-203ENST00000530174 PRAM1Q96QH2 718 aa27.38■■□□□ 1.97
PCNX3-203ENST00000530174 LRRC59Q96AG4 307 aaKnown RBP27.37■■□□□ 1.97
PCNX3-203ENST00000530174 FMN2Q9NZ56 1722 aa27.37■■□□□ 1.97
PCNX3-203ENST00000530174 ESCO1Q5FWF5 840 aa27.36■■□□□ 1.97
PCNX3-203ENST00000530174 NUTM2FA1L443 756 aa27.35■■□□□ 1.97
PCNX3-203ENST00000530174 SAFB2Q14151 953 aaKnown RBP eCLIP27.35■■□□□ 1.97
PCNX3-203ENST00000530174 TRAK1Q9UPV9 953 aa27.34■■□□□ 1.97
PCNX3-203ENST00000530174 POGKQ9P215 609 aa27.33■■□□□ 1.97
PCNX3-203ENST00000530174 SOS2Q07890 1332 aaPredicted RBP27.33■■□□□ 1.97
PCNX3-203ENST00000530174 PNPLA6Q8IY17 1366 aa27.32■■□□□ 1.96
PCNX3-203ENST00000530174 NUTM2BA6NNL0 878 aaPredicted RBP27.3■■□□□ 1.96
PCNX3-203ENST00000530174 NUTM2EB1AL46 878 aaPredicted RBP27.3■■□□□ 1.96
PCNX3-203ENST00000530174 MEX3CQ5U5Q3 659 aaKnown RBP27.3■■□□□ 1.96
PCNX3-203ENST00000530174 NUTM2AQ8IVF1 878 aaPredicted RBP27.3■■□□□ 1.96
PCNX3-203ENST00000530174 NPHP3Q7Z494 1330 aa27.28■■□□□ 1.96
PCNX3-203ENST00000530174 ADGRB2O60241 1585 aa27.27■■□□□ 1.96
PCNX3-203ENST00000530174 POTEAQ6S8J7 498 aa27.27■■□□□ 1.96
PCNX3-203ENST00000530174 FOXO3O43524 673 aa27.26■■□□□ 1.95
PCNX3-203ENST00000530174 TRIM26Q12899 539 aaPredicted RBP27.26■■□□□ 1.95
PCNX3-203ENST00000530174 SIN3AQ96ST3 1273 aa27.26■■□□□ 1.95
PCNX3-203ENST00000530174 KIAA1210Q9ULL0 1709 aa27.26■■□□□ 1.95
PCNX3-203ENST00000530174 PXDNQ92626 1479 aa27.25■■□□□ 1.95
PCNX3-203ENST00000530174 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
PCNX3-203ENST00000530174 RGPD8O14715 1765 aaPredicted RBP27.24■■□□□ 1.95
PCNX3-203ENST00000530174 ARHGEF28Q8N1W1 1705 aaKnown RBP27.24■■□□□ 1.95
PCNX3-203ENST00000530174 XPCQ01831 940 aaPredicted RBP27.23■■□□□ 1.95
PCNX3-203ENST00000530174 MINK1Q8N4C8 1332 aaPredicted RBP27.22■■□□□ 1.95
PCNX3-203ENST00000530174 HIRIP3Q9BW71 556 aaPredicted RBP27.22■■□□□ 1.95
PCNX3-203ENST00000530174 L3MBTL2Q969R5 705 aa27.21■■□□□ 1.95
PCNX3-203ENST00000530174 USP32Q8NFA0 1604 aa27.19■■□□□ 1.94
PCNX3-203ENST00000530174 ANKARQ7Z5J8 1434 aa27.19■■□□□ 1.94
PCNX3-203ENST00000530174 NEUROD1Q13562 356 aa27.19■■□□□ 1.94
PCNX3-203ENST00000530174 NBPF1Q3BBV0 1214 aa27.18■■□□□ 1.94
PCNX3-203ENST00000530174 PHF8Q9UPP1 1060 aa27.18■■□□□ 1.94
PCNX3-203ENST00000530174 COL22A1Q8NFW1 1626 aaPredicted RBP27.18■■□□□ 1.94
PCNX3-203ENST00000530174 ZNF772Q68DY9 489 aaPredicted RBP27.16■■□□□ 1.94
PCNX3-203ENST00000530174 EIF3AQ14152 1382 aaKnown RBP27.14■■□□□ 1.94
PCNX3-203ENST00000530174 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
PCNX3-203ENST00000530174 TULP4Q9NRJ4 1543 aa27.14■■□□□ 1.94
PCNX3-203ENST00000530174 ADAMTS2O95450 1211 aa27.13■■□□□ 1.93
PCNX3-203ENST00000530174 C8orf37Q96NL8 207 aa27.13■■□□□ 1.93
PCNX3-203ENST00000530174 AFF2P51816 1311 aa27.13■■□□□ 1.93
PCNX3-203ENST00000530174 KRT28Q7Z3Y7 464 aa27.12■■□□□ 1.93
PCNX3-203ENST00000530174 PRR36Q9H6K5 1346 aa27.12■■□□□ 1.93
PCNX3-203ENST00000530174 SPATA31A3Q5VYP0 1347 aa27.1■■□□□ 1.93
PCNX3-203ENST00000530174 PMFBP1Q8TBY8 1022 aa27.09■■□□□ 1.93
PCNX3-203ENST00000530174 TRPM1Q7Z4N2 1603 aa27.07■■□□□ 1.92
PCNX3-203ENST00000530174 PSME1Q06323 249 aa27.06■■□□□ 1.92
PCNX3-203ENST00000530174 TNS3Q68CZ2 1445 aa27.06■■□□□ 1.92
PCNX3-203ENST00000530174 NGLY1Q96IV0 654 aa27.05■■□□□ 1.92
PCNX3-203ENST00000530174 ATP7BP35670 1465 aa27.05■■□□□ 1.92
PCNX3-203ENST00000530174 SBNO1A3KN83 1393 aa27.04■■□□□ 1.92
PCNX3-203ENST00000530174 CENPJQ9HC77 1338 aaPredicted RBP27.02■■□□□ 1.92
PCNX3-203ENST00000530174 CDK19Q9BWU1 502 aa27.02■■□□□ 1.92
PCNX3-203ENST00000530174 NUDT16Q96DE0 195 aaKnown RBP27.01■■□□□ 1.91
PCNX3-203ENST00000530174 ITSN1Q15811 1721 aa27.01■■□□□ 1.91
PCNX3-203ENST00000530174 MARF1Q9Y4F3 1742 aaKnown RBP27.01■■□□□ 1.91
PCNX3-203ENST00000530174 RXRBP28702 533 aa27■■□□□ 1.91
PCNX3-203ENST00000530174 TRPM3Q9HCF6 1732 aaPredicted RBP26.99■■□□□ 1.91
PCNX3-203ENST00000530174 ROCK2O75116 1388 aaKnown RBP26.99■■□□□ 1.91
PCNX3-203ENST00000530174 QRICH2Q9H0J4 1663 aa26.98■■□□□ 1.91
PCNX3-203ENST00000530174 GPRASP1Q5JY77 1395 aa26.98■■□□□ 1.91
PCNX3-203ENST00000530174 NBPF8Q3BBV2 869 aa26.98■■□□□ 1.91
PCNX3-203ENST00000530174 LMOD2Q6P5Q4 547 aa26.98■■□□□ 1.91
PCNX3-203ENST00000530174 ARHGEF10O15013 1369 aa26.97■■□□□ 1.91
PCNX3-203ENST00000530174 FNBP4Q8N3X1 1017 aaPredicted RBP26.97■■□□□ 1.91
PCNX3-203ENST00000530174 NGDNQ8NEJ9 315 aaKnown RBP26.97■■□□□ 1.91
PCNX3-203ENST00000530174 QTRT2Q9H974 415 aaKnown RBP26.97■■□□□ 1.91
PCNX3-203ENST00000530174 TONSLQ96HA7 1378 aa26.97■■□□□ 1.91
PCNX3-203ENST00000530174 TOPAZ1Q8N9V7 1692 aa26.96■■□□□ 1.91
PCNX3-203ENST00000530174 USP21Q9UK80 565 aa26.96■■□□□ 1.91
PCNX3-203ENST00000530174 CABLES1Q8TDN4 633 aa26.94■■□□□ 1.9
PCNX3-203ENST00000530174 CDK12Q9NYV4 1490 aaPredicted RBP26.93■■□□□ 1.9
PCNX3-203ENST00000530174 ABCA3Q99758 1704 aa26.93■■□□□ 1.9
PCNX3-203ENST00000530174 ALS2Q96Q42 1657 aa26.93■■□□□ 1.9
PCNX3-203ENST00000530174 PLEKHG5O94827 1062 aa26.93■■□□□ 1.9
PCNX3-203ENST00000530174 HAP1P54257 671 aaPredicted RBP26.92■■□□□ 1.9
PCNX3-203ENST00000530174 RBM6P78332 1123 aaKnown RBP26.92■■□□□ 1.9
PCNX3-203ENST00000530174 CCDC61Q9Y6R9 512 aa26.92■■□□□ 1.9
PCNX3-203ENST00000530174 BCL9LQ86UU0 1499 aa26.9■■□□□ 1.9
PCNX3-203ENST00000530174 SRPK2P78362 688 aaKnown RBP26.9■■□□□ 1.9
PCNX3-203ENST00000530174 TRPC5Q9UL62 973 aaPredicted RBP26.89■■□□□ 1.9
PCNX3-203ENST00000530174 ATRNO75882 1429 aa26.89■■□□□ 1.89
PCNX3-203ENST00000530174 POLR3AO14802 1390 aaPredicted RBP26.88■■□□□ 1.89
PCNX3-203ENST00000530174 CABP2Q9NPB3 220 aa26.88■■□□□ 1.89
PCNX3-203ENST00000530174 ACEP12821 1306 aa26.88■■□□□ 1.89
PCNX3-203ENST00000530174 PLEKHG3A1L390 1219 aa26.87■■□□□ 1.89
PCNX3-203ENST00000530174 PAK3O75914 559 aaPredicted RBP26.87■■□□□ 1.89
PCNX3-203ENST00000530174 RGS12O14924 1447 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms