RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
CHD7-208ENST00000528280 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
CHD7-208ENST00000528280 QTRT2Q9H974 415 aaKnown RBP14□□□□□ -0.17
CHD7-208ENST00000528280 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
CHD7-208ENST00000528280 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
CHD7-208ENST00000528280 MST1RQ04912 1400 aa13.98□□□□□ -0.17
CHD7-208ENST00000528280 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
CHD7-208ENST00000528280 ATAD2Q6PL18 1390 aa13.97□□□□□ -0.17
CHD7-208ENST00000528280 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
CHD7-208ENST00000528280 MYOM2P54296 1465 aa13.96□□□□□ -0.17
CHD7-208ENST00000528280 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
CHD7-208ENST00000528280 TECPR2O15040 1411 aa13.96□□□□□ -0.18
CHD7-208ENST00000528280 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
CHD7-208ENST00000528280 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
CHD7-208ENST00000528280 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
CHD7-208ENST00000528280 YTHDC2Q9H6S0 1430 aaKnown RBP13.95□□□□□ -0.18
CHD7-208ENST00000528280 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
CHD7-208ENST00000528280 ESCO1Q5FWF5 840 aa13.93□□□□□ -0.18
CHD7-208ENST00000528280 NGLY1Q96IV0 654 aa13.93□□□□□ -0.18
CHD7-208ENST00000528280 POGKQ9P215 609 aa13.93□□□□□ -0.18
CHD7-208ENST00000528280 ASXL1Q8IXJ9 1541 aa13.93□□□□□ -0.18
CHD7-208ENST00000528280 EP400Q96L91 3159 aa13.93□□□□□ -0.18
CHD7-208ENST00000528280 ORAI2Q96SN7 254 aa13.92□□□□□ -0.18
CHD7-208ENST00000528280 NHSL1Q5SYE7 1610 aa13.92□□□□□ -0.18
CHD7-208ENST00000528280 LAMC1P11047 1609 aa13.91□□□□□ -0.18
CHD7-208ENST00000528280 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
CHD7-208ENST00000528280 C8orf37Q96NL8 207 aa13.91□□□□□ -0.18
CHD7-208ENST00000528280 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.18
CHD7-208ENST00000528280 NALCNQ8IZF0 1738 aa13.9□□□□□ -0.18
CHD7-208ENST00000528280 LRP5O75197 1615 aa13.9□□□□□ -0.19
CHD7-208ENST00000528280 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
CHD7-208ENST00000528280 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
CHD7-208ENST00000528280 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
CHD7-208ENST00000528280 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
CHD7-208ENST00000528280 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
CHD7-208ENST00000528280 FOXO3O43524 673 aa13.87□□□□□ -0.19
CHD7-208ENST00000528280 DDX17Q92841 729 aaKnown RBP13.87□□□□□ -0.19
CHD7-208ENST00000528280 PLEKHH1Q9ULM0 1364 aa13.86□□□□□ -0.19
CHD7-208ENST00000528280 PSME1Q06323 249 aa13.86□□□□□ -0.19
CHD7-208ENST00000528280 DLC1Q96QB1 1528 aa13.85□□□□□ -0.19
CHD7-208ENST00000528280 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
CHD7-208ENST00000528280 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
CHD7-208ENST00000528280 PNPLA6Q8IY17 1366 aa13.84□□□□□ -0.19
CHD7-208ENST00000528280 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
CHD7-208ENST00000528280 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHD7-208ENST00000528280 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
CHD7-208ENST00000528280 TRPC5Q9UL62 973 aaPredicted RBP13.83□□□□□ -0.2
CHD7-208ENST00000528280 KRT28Q7Z3Y7 464 aa13.82□□□□□ -0.2
CHD7-208ENST00000528280 USP21Q9UK80 565 aa13.82□□□□□ -0.2
CHD7-208ENST00000528280 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
CHD7-208ENST00000528280 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
CHD7-208ENST00000528280 ADAMTS2O95450 1211 aa13.8□□□□□ -0.2
CHD7-208ENST00000528280 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
CHD7-208ENST00000528280 ATRNO75882 1429 aa13.8□□□□□ -0.2
CHD7-208ENST00000528280 ANKARQ7Z5J8 1434 aa13.8□□□□□ -0.2
CHD7-208ENST00000528280 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
CHD7-208ENST00000528280 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
CHD7-208ENST00000528280 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
CHD7-208ENST00000528280 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
CHD7-208ENST00000528280 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
CHD7-208ENST00000528280 XPCQ01831 940 aaPredicted RBP13.77□□□□□ -0.21
CHD7-208ENST00000528280 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
CHD7-208ENST00000528280 SIN3AQ96ST3 1273 aa13.77□□□□□ -0.21
CHD7-208ENST00000528280 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
CHD7-208ENST00000528280 MARF1Q9Y4F3 1742 aaKnown RBP13.77□□□□□ -0.21
CHD7-208ENST00000528280 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
CHD7-208ENST00000528280 KIF1AQ12756 1690 aa13.76□□□□□ -0.21
CHD7-208ENST00000528280 PXDNQ92626 1479 aa13.76□□□□□ -0.21
CHD7-208ENST00000528280 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
CHD7-208ENST00000528280 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
CHD7-208ENST00000528280 SBNO1A3KN83 1393 aa13.75□□□□□ -0.21
CHD7-208ENST00000528280 NBPF1Q3BBV0 1214 aa13.75□□□□□ -0.21
CHD7-208ENST00000528280 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
CHD7-208ENST00000528280 PMFBP1Q8TBY8 1022 aa13.75□□□□□ -0.21
CHD7-208ENST00000528280 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
CHD7-208ENST00000528280 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
CHD7-208ENST00000528280 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
CHD7-208ENST00000528280 ADGRB2O60241 1585 aa13.74□□□□□ -0.21
CHD7-208ENST00000528280 ARHGEF10O15013 1369 aa13.73□□□□□ -0.21
CHD7-208ENST00000528280 COL22A1Q8NFW1 1626 aaPredicted RBP13.73□□□□□ -0.21
CHD7-208ENST00000528280 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
CHD7-208ENST00000528280 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
CHD7-208ENST00000528280 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
CHD7-208ENST00000528280 BCL9LQ86UU0 1499 aa13.72□□□□□ -0.21
CHD7-208ENST00000528280 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.21
CHD7-208ENST00000528280 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
CHD7-208ENST00000528280 TULP4Q9NRJ4 1543 aa13.7□□□□□ -0.22
CHD7-208ENST00000528280 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
CHD7-208ENST00000528280 TNS3Q68CZ2 1445 aa13.7□□□□□ -0.22
CHD7-208ENST00000528280 RGPD8O14715 1765 aaPredicted RBP13.7□□□□□ -0.22
CHD7-208ENST00000528280 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
CHD7-208ENST00000528280 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
CHD7-208ENST00000528280 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
CHD7-208ENST00000528280 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
CHD7-208ENST00000528280 SF3B2Q13435 895 aaKnown RBP13.67□□□□□ -0.22
CHD7-208ENST00000528280 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
CHD7-208ENST00000528280 UNC5CLQ8IV45 518 aa13.67□□□□□ -0.22
CHD7-208ENST00000528280 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
CHD7-208ENST00000528280 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
CHD7-208ENST00000528280 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms